Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09745

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,054,869	-		DZA65_RS09740	0.47	+2.3
2,054,870	+		DZA65_RS09740	0.47	+0.6
2,054,979	+		DZA65_RS09740	0.61	-0.0
2,054,979	+		DZA65_RS09740	0.61	-1.0
2,054,979	+		DZA65_RS09740	0.61	-0.3
2,054,980	-		DZA65_RS09740	0.61	+1.5
2,054,980	-		DZA65_RS09740	0.61	+0.8
2,055,012	+		DZA65_RS09740	0.65	-1.2
2,055,012	+		DZA65_RS09740	0.65	+1.8
2,055,012	+		DZA65_RS09740	0.65	+0.2
2,055,012	+		DZA65_RS09740	0.65	-0.1
2,055,012	+		DZA65_RS09740	0.65	+1.2
2,055,013	-		DZA65_RS09740	0.65	+0.2
2,055,013	-		DZA65_RS09740	0.65	+0.4
2,055,013	-		DZA65_RS09740	0.65	+0.8
2,055,013	-		DZA65_RS09740	0.65	-0.3
2,055,013	-		DZA65_RS09740	0.65	+0.8
2,055,013	-		DZA65_RS09740	0.65	+0.9
2,055,013	-		DZA65_RS09740	0.65	-3.0
2,055,013	-		DZA65_RS09740	0.65	+0.3
2,055,031	-		DZA65_RS09740	0.67	+0.2
2,055,042	-		DZA65_RS09740	0.68	-0.2
2,055,135	+		DZA65_RS09740	0.80	-0.2
2,055,272	+				+0.5
2,055,295	-				-0.1
2,055,346	+				+0.6
2,055,436	-				-0.4
2,055,545	+				-0.7
2,055,545	+				+0.2
2,055,647	+				+0.2
2,055,647	+				-0.1
2,055,647	+				+1.2
2,055,648	-				-0.1
2,055,752	-				+0.5
2,055,828	+				-0.5
2,055,829	-				+0.4
2,055,841	+				-0.2
2,055,841	+				-0.5
2,055,900	+				-0.8
2,056,046	+		DZA65_RS09745	0.19	+0.5
2,056,046	+		DZA65_RS09745	0.19	+0.5
2,056,046	+		DZA65_RS09745	0.19	+0.4
2,056,046	+		DZA65_RS09745	0.19	-0.6
2,056,046	+		DZA65_RS09745	0.19	-1.2
2,056,046	+		DZA65_RS09745	0.19	-0.1
2,056,047	-		DZA65_RS09745	0.19	+0.2
2,056,047	-		DZA65_RS09745	0.19	-1.0
2,056,047	-		DZA65_RS09745	0.19	+0.0
2,056,047	-		DZA65_RS09745	0.19	+0.6
2,056,047	-		DZA65_RS09745	0.19	-0.0
2,056,047	-		DZA65_RS09745	0.19	-1.1
2,056,047	-		DZA65_RS09745	0.19	-0.5
2,056,047	-		DZA65_RS09745	0.19	-0.2
2,056,094	-				-0.8
2,056,094	-		DZA65_RS09745	0.23	-1.4
2,056,094	-		DZA65_RS09745	0.23	+0.1
2,056,130	-		DZA65_RS09745	0.26	-0.4
2,056,253	+		DZA65_RS09745	0.36	+0.0
2,056,254	-		DZA65_RS09745	0.36	-0.5
2,056,254	-		DZA65_RS09745	0.36	-0.5
2,056,254	-		DZA65_RS09745	0.36	-0.9
2,056,324	+		DZA65_RS09745	0.42	+0.4
2,056,354	+		DZA65_RS09745	0.44	+0.7
2,056,367	+		DZA65_RS09745	0.45	-0.8
2,056,466	-		DZA65_RS09745	0.53	+0.3
2,056,468	+		DZA65_RS09745	0.54	+0.3
2,056,469	-		DZA65_RS09745	0.54	-0.0
2,056,495	-		DZA65_RS09745	0.56	+0.0
2,056,538	+		DZA65_RS09745	0.59	-1.6
2,056,540	+		DZA65_RS09745	0.59	-0.3
2,056,540	+		DZA65_RS09745	0.59	+0.1
2,056,540	+		DZA65_RS09745	0.59	-0.3
2,056,541	-		DZA65_RS09745	0.60	+0.4
2,056,913	-				+0.4
2,057,039	+				-0.3
2,057,118	+				-0.1
2,057,118	+				-0.1
2,057,152	+				-0.8
2,057,152	+				+1.5
2,057,153	-				-2.4
2,057,153	-				-0.5
2,057,156	+				+1.1
2,057,157	-				+0.5
2,057,157	-				+0.5
2,057,168	+		DZA65_RS09750	0.11	-1.2
2,057,168	+		DZA65_RS09750	0.11	-0.4
2,057,168	+		DZA65_RS09750	0.11	+1.1
2,057,168	+		DZA65_RS09750	0.11	+0.2
2,057,169	-		DZA65_RS09750	0.11	-1.8
2,057,169	-		DZA65_RS09750	0.11	-0.3
2,057,169	-		DZA65_RS09750	0.11	-0.2
2,057,169	-		DZA65_RS09750	0.11	-0.4
2,057,169	-		DZA65_RS09750	0.11	-1.0
2,057,287	+		DZA65_RS09750	0.27	+0.3
2,057,386	+		DZA65_RS09750	0.40	+0.3
2,057,454	-		DZA65_RS09750	0.48	+0.1
2,057,467	+		DZA65_RS09750	0.50	-0.1
2,057,468	-		DZA65_RS09750	0.50	+0.8
2,057,468	-		DZA65_RS09750	0.50	-0.5
2,057,468	-		DZA65_RS09750	0.50	+0.7
2,057,561	-		DZA65_RS09750	0.62	-1.8
2,057,686	-		DZA65_RS09750	0.78	-1.1
2,057,853	+				-0.4
2,057,853	+				+0.5
2,057,853	+				-0.2
2,057,853	+				-0.6
2,057,853	+				-2.0
2,057,853	+				+0.9
2,057,854	-				-0.9
2,057,854	-				-1.4
2,057,854	-				+1.2
2,057,854	-				-0.2
2,057,864	+				+1.3
2,057,906	+				+0.5
2,057,906	+				+0.6
2,057,906	+				+0.5
2,057,906	+				+1.2
2,057,906	+				+0.4
2,057,906	+				+0.5
2,057,906	+				-1.0
2,057,906	+				+0.1
2,057,906	+				-0.2
2,057,906	+				-0.4
2,057,906	+				-0.4
2,057,907	-				-0.2
2,057,907	-				+1.1
2,057,907	-				-1.2
2,057,909	+				-0.0
2,057,909	+				+0.6
2,057,909	+				-0.0
2,057,909	+				-0.3
2,057,910	-				-0.4
2,057,910	-				-2.6
2,057,910	-				-0.3
2,057,951	-				-0.1
2,057,993	-				-0.8
2,057,993	-				-0.9
2,057,993	-				+0.1
2,058,025	+				+0.8