Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09740

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,053,622	+		DZA65_RS09730	0.87	+0.6
2,053,622	+		DZA65_RS09730	0.87	+0.4
2,053,622	+		DZA65_RS09730	0.87	+0.2
2,053,623	-		DZA65_RS09730	0.87	+0.7
2,053,623	-		DZA65_RS09730	0.87	-0.6
2,053,623	-		DZA65_RS09730	0.87	+0.7
2,053,623	-		DZA65_RS09730	0.87	-1.6
2,053,623	-		DZA65_RS09730	0.87	-0.9
2,053,623	-		DZA65_RS09730	0.87	-1.8
2,053,623	-		DZA65_RS09730	0.87	+1.5
2,053,624	+		DZA65_RS09730	0.88	-0.3
2,053,624	+		DZA65_RS09730	0.88	+0.8
2,053,798	+				+0.4
2,053,798	+				+1.0
2,053,799	-				+0.7
2,053,799	-				-0.0
2,053,802	+				-0.4
2,053,802	+				+0.2
2,053,802	+				+1.0
2,053,803	-				+0.2
2,053,854	+		DZA65_RS09735	0.17	-1.0
2,053,854	+		DZA65_RS09735	0.17	+0.4
2,053,854	+		DZA65_RS09735	0.17	-0.2
2,053,855	-		DZA65_RS09735	0.17	-1.2
2,053,855	-		DZA65_RS09735	0.17	+1.0
2,053,855	-		DZA65_RS09735	0.17	-0.1
2,053,855	-		DZA65_RS09735	0.17	-0.1
2,053,873	+		DZA65_RS09735	0.20	-0.3
2,053,873	+		DZA65_RS09735	0.20	-0.2
2,053,873	+		DZA65_RS09735	0.20	+0.3
2,053,874	-		DZA65_RS09735	0.20	+0.5
2,053,874	-				-1.1
2,053,874	-		DZA65_RS09735	0.20	-0.4
2,053,874	-		DZA65_RS09735	0.20	-0.1
2,053,922	+		DZA65_RS09735	0.27	-0.1
2,053,922	+		DZA65_RS09735	0.27	-0.7
2,053,922	+		DZA65_RS09735	0.27	-0.2
2,053,923	-		DZA65_RS09735	0.27	-0.8
2,053,923	-		DZA65_RS09735	0.27	-1.7
2,053,926	-		DZA65_RS09735	0.28	-0.8
2,053,957	+		DZA65_RS09735	0.32	+0.1
2,053,957	+		DZA65_RS09735	0.32	+0.2
2,053,957	+		DZA65_RS09735	0.32	-0.5
2,053,957	+		DZA65_RS09735	0.32	-1.0
2,053,958	-		DZA65_RS09735	0.32	-2.8
2,054,049	+				+0.8
2,054,049	+		DZA65_RS09735	0.46	+0.2
2,054,049	+		DZA65_RS09735	0.46	-0.1
2,054,050	-		DZA65_RS09735	0.46	-0.2
2,054,050	-		DZA65_RS09735	0.46	-0.8
2,054,050	-		DZA65_RS09735	0.46	-1.0
2,054,050	-		DZA65_RS09735	0.46	-0.6
2,054,050	-		DZA65_RS09735	0.46	-0.5
2,054,290	-		DZA65_RS09735	0.83	-0.2
2,054,302	+		DZA65_RS09735	0.84	-0.3
2,054,303	-		DZA65_RS09735	0.84	-0.8
2,054,338	+		DZA65_RS09735	0.90	+0.3
2,054,338	+		DZA65_RS09735	0.90	-0.4
2,054,344	+				-0.5
2,054,344	+				-0.6
2,054,345	-				+1.2
2,054,345	-				-0.3
2,054,345	-				-0.5
2,054,347	+				+0.2
2,054,347	+				-1.4
2,054,347	+				+0.6
2,054,347	+				-0.2
2,054,347	+				+0.1
2,054,348	-				+0.8
2,054,348	-				+0.0
2,054,348	-				-0.6
2,054,348	-				-0.3
2,054,415	-				+1.0
2,054,592	+		DZA65_RS09740	0.13	-0.1
2,054,595	-		DZA65_RS09740	0.14	-0.4
2,054,631	-		DZA65_RS09740	0.18	+0.2
2,054,869	-		DZA65_RS09740	0.47	+2.3
2,054,870	+		DZA65_RS09740	0.47	+0.6
2,054,979	+		DZA65_RS09740	0.61	-0.0
2,054,979	+		DZA65_RS09740	0.61	-1.0
2,054,979	+		DZA65_RS09740	0.61	-0.3
2,054,980	-		DZA65_RS09740	0.61	+1.5
2,054,980	-		DZA65_RS09740	0.61	+0.8
2,055,012	+		DZA65_RS09740	0.65	-1.2
2,055,012	+		DZA65_RS09740	0.65	+1.8
2,055,012	+		DZA65_RS09740	0.65	+0.2
2,055,012	+		DZA65_RS09740	0.65	-0.1
2,055,012	+		DZA65_RS09740	0.65	+1.2
2,055,013	-		DZA65_RS09740	0.65	+0.2
2,055,013	-		DZA65_RS09740	0.65	+0.4
2,055,013	-		DZA65_RS09740	0.65	+0.8
2,055,013	-		DZA65_RS09740	0.65	-0.3
2,055,013	-		DZA65_RS09740	0.65	+0.8
2,055,013	-		DZA65_RS09740	0.65	+0.9
2,055,013	-		DZA65_RS09740	0.65	-3.0
2,055,013	-		DZA65_RS09740	0.65	+0.3
2,055,031	-		DZA65_RS09740	0.67	+0.2
2,055,042	-		DZA65_RS09740	0.68	-0.2
2,055,135	+		DZA65_RS09740	0.80	-0.2
2,055,272	+				+0.5
2,055,295	-				-0.1
2,055,346	+				+0.6
2,055,436	-				-0.4
2,055,545	+				-0.7
2,055,545	+				+0.2
2,055,647	+				+0.2
2,055,647	+				-0.1
2,055,647	+				+1.2
2,055,648	-				-0.1
2,055,752	-				+0.5
2,055,828	+				-0.5
2,055,829	-				+0.4
2,055,841	+				-0.2
2,055,841	+				-0.5
2,055,900	+				-0.8
2,056,046	+		DZA65_RS09745	0.19	+0.5
2,056,046	+		DZA65_RS09745	0.19	+0.5
2,056,046	+		DZA65_RS09745	0.19	+0.4
2,056,046	+		DZA65_RS09745	0.19	-0.6
2,056,046	+		DZA65_RS09745	0.19	-1.2
2,056,046	+		DZA65_RS09745	0.19	-0.1
2,056,047	-		DZA65_RS09745	0.19	+0.2
2,056,047	-		DZA65_RS09745	0.19	-1.0
2,056,047	-		DZA65_RS09745	0.19	+0.0
2,056,047	-		DZA65_RS09745	0.19	+0.6
2,056,047	-		DZA65_RS09745	0.19	-0.0
2,056,047	-		DZA65_RS09745	0.19	-1.1
2,056,047	-		DZA65_RS09745	0.19	-0.5
2,056,047	-		DZA65_RS09745	0.19	-0.2
2,056,094	-				-0.8
2,056,094	-		DZA65_RS09745	0.23	-1.4
2,056,094	-		DZA65_RS09745	0.23	+0.1
2,056,130	-		DZA65_RS09745	0.26	-0.4
2,056,253	+		DZA65_RS09745	0.36	+0.0
2,056,254	-		DZA65_RS09745	0.36	-0.5
2,056,254	-		DZA65_RS09745	0.36	-0.5
2,056,254	-		DZA65_RS09745	0.36	-0.9