Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09405

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,977,429	+				-1.6
1,977,437	-				+0.2
1,977,439	-				-1.1
1,977,439	-				-2.3
1,977,445	+				-0.3
1,977,445	+				-2.3
1,977,446	-				-0.8
1,977,447	+				-0.2
1,977,448	-				+0.1
1,977,448	-				-0.8
1,977,480	-				-2.7
1,977,485	+				-0.8
1,977,485	+				-0.5
1,977,520	+				-0.6
1,977,520	+				+0.0
1,977,521	-				-2.1
1,977,521	-				-2.1
1,977,521	-				+0.5
1,977,521	-				-0.2
1,977,521	-				+0.2
1,977,521	-				-0.8
1,977,655	-				-1.3
1,977,655	-		DZA65_RS09395	0.31	-1.6
1,977,673	-				+1.2
1,977,686	+		DZA65_RS09395	0.39	-0.8
1,977,724	-		DZA65_RS09395	0.50	+0.2
1,977,775	-		DZA65_RS09395	0.64	-1.3
1,977,820	+		DZA65_RS09395	0.77	-0.8
1,977,866	-				+0.2
1,977,918	+				-0.9
1,977,925	+				+0.5
1,977,925	+				-0.7
1,978,184	-				-0.5
1,978,184	-				-0.9
1,978,188	-				-0.4
1,978,222	-				-1.2
1,978,222	-				-0.8
1,978,222	-				-1.1
1,978,226	-				-2.8
1,978,226	-				-0.5
1,978,300	-				-0.0
1,978,325	-				-0.2
1,978,348	-				-0.6
1,978,348	-				-0.3
1,978,388	+				-0.6
1,978,395	+				+0.2
1,978,395	+				-0.4
1,978,396	-				-1.3
1,978,475	-		DZA65_RS09405	0.16	-0.3
1,978,475	-		DZA65_RS09405	0.16	-1.6
1,978,488	-		DZA65_RS09405	0.20	-1.0
1,978,488	-		DZA65_RS09405	0.20	-0.8
1,978,501	+		DZA65_RS09405	0.24	+0.2
1,978,501	+		DZA65_RS09405	0.24	+0.4
1,978,502	-		DZA65_RS09405	0.25	-0.1
1,978,502	-		DZA65_RS09405	0.25	-0.9
1,978,502	-				+0.2
1,978,502	-		DZA65_RS09405	0.25	-0.4
1,978,502	-		DZA65_RS09405	0.25	-2.3
1,978,504	+		DZA65_RS09405	0.25	-0.2
1,978,504	+		DZA65_RS09405	0.25	+0.2
1,978,504	+		DZA65_RS09405	0.25	-2.3
1,978,505	-		DZA65_RS09405	0.26	+0.0
1,978,505	-		DZA65_RS09405	0.26	+1.5
1,978,530	+		DZA65_RS09405	0.34	+0.9
1,978,530	+		DZA65_RS09405	0.34	+0.1
1,978,530	+		DZA65_RS09405	0.34	-1.1
1,978,531	-		DZA65_RS09405	0.34	-0.4
1,978,531	-				+0.7
1,978,531	-		DZA65_RS09405	0.34	+0.0
1,978,531	-		DZA65_RS09405	0.34	-0.8
1,978,531	-		DZA65_RS09405	0.34	-1.8
1,978,531	-		DZA65_RS09405	0.34	-0.8
1,978,531	-		DZA65_RS09405	0.34	-0.5
1,978,607	+		DZA65_RS09405	0.59	-0.2
1,978,608	-		DZA65_RS09405	0.60	+0.3
1,978,674	+		DZA65_RS09405	0.82	+0.2
1,978,675	-		DZA65_RS09405	0.82	-1.8
1,978,675	-		DZA65_RS09405	0.82	-0.9
1,978,731	+				-0.1
1,978,731	+				-0.0
1,978,731	+				+0.5
1,978,731	+				+1.2
1,978,732	-				+0.7
1,978,739	+				-0.7
1,978,740	-				-0.3
1,978,744	-		DZA65_RS09410	0.10	+0.7
1,978,781	+		DZA65_RS09410	0.25	+0.5
1,978,805	+		DZA65_RS09410	0.35	-1.9
1,978,806	-		DZA65_RS09410	0.35	+0.8
1,978,806	-		DZA65_RS09410	0.35	-0.4
1,978,827	+		DZA65_RS09410	0.44	+1.2
1,978,827	+		DZA65_RS09410	0.44	-0.8
1,978,828	-		DZA65_RS09410	0.44	+0.4
1,978,828	-		DZA65_RS09410	0.44	+0.8
1,978,828	-		DZA65_RS09410	0.44	-2.3
1,978,852	+		DZA65_RS09410	0.54	-2.1
1,978,853	-		DZA65_RS09410	0.54	+0.0
1,978,853	-		DZA65_RS09410	0.54	-0.8
1,978,890	-		DZA65_RS09410	0.70	+0.7
1,978,956	-				-1.3
1,978,968	-				+0.8
1,978,979	-				-0.2
1,978,979	-				+0.7
1,978,997	-				+2.2
1,979,010	+				-0.6
1,979,033	+				+0.2
1,979,033	+				+0.2
1,979,034	-				+0.5
1,979,034	-				+0.3
1,979,037	+				+0.0
1,979,038	-				-0.2
1,979,038	-				+0.0
1,979,038	-				-0.5
1,979,043	+				-0.8
1,979,062	+				+0.2
1,979,062	+				+0.3
1,979,062	+				-0.0
1,979,062	+				+0.8
1,979,063	-				+1.0
1,979,063	-				-0.7
1,979,094	+				+0.2
1,979,095	-				-2.2
1,979,139	+				-2.3
1,979,139	+				-0.5
1,979,139	+				+0.2
1,979,140	-				-0.1
1,979,140	-				+0.2
1,979,140	-				+0.7
1,979,140	-				+0.6
1,979,140	-				-0.3
1,979,142	+				-0.8
1,979,160	+				-1.1
1,979,160	+				+1.5
1,979,160	+				-0.4
1,979,160	+				+0.7
1,979,164	+				-0.6
1,979,164	+				+1.2
1,979,165	-				+0.5
1,979,165	-				-0.1
1,979,166	+				+0.2
1,979,166	+				-0.4
1,979,166	+				-0.1
1,979,166	+				+1.8
1,979,166	+				+0.4
1,979,167	-				+0.1
1,979,167	-				+0.0
1,979,167	-				+0.4
1,979,167	-				-0.5
1,979,167	-				+0.5
1,979,167	-				-1.8
1,979,167	-				+0.2
1,979,167	-				+0.1
1,979,189	+				-1.2
1,979,189	+				+0.4
1,979,214	+				+0.0
1,979,214	+				-0.9
1,979,214	+				+0.1
1,979,214	+				-0.1
1,979,215	-				+0.6
1,979,215	-				+1.0
1,979,215	-				-1.3
1,979,253	-				-0.3
1,979,253	-				+0.9
1,979,257	+				+0.0
1,979,257	+				+1.7
1,979,257	+				-0.6
1,979,258	-				+0.9
1,979,258	-				-0.7
1,979,258	-				+0.7
1,979,260	+				+0.5
1,979,260	+				-0.3
1,979,260	+				+0.2
1,979,260	+				-0.5
1,979,260	+				+0.1
1,979,260	+				-1.0
1,979,261	-				+0.8
1,979,261	-				+0.0
1,979,261	-				-1.0
1,979,415	-				-0.3
1,979,447	+				+0.5
1,979,515	-				-0.1
1,979,519	-				+0.7
1,979,672	-		DZA65_RS09415	0.20	+0.2