Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08600

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,815,801	+		DZA65_RS08590	0.80	-2.7
1,815,801	+		DZA65_RS08590	0.80	-0.7
1,815,802	-		DZA65_RS08590	0.80	+0.1
1,815,802	-		DZA65_RS08590	0.80	-0.6
1,815,860	+		DZA65_RS08590	0.83	-0.2
1,815,861	-		DZA65_RS08590	0.83	-1.1
1,815,919	+		DZA65_RS08590	0.87	-0.3
1,815,919	+		DZA65_RS08590	0.87	-0.2
1,815,919	+		DZA65_RS08590	0.87	-0.5
1,815,919	+		DZA65_RS08590	0.87	+0.5
1,815,919	+		DZA65_RS08590	0.87	-0.9
1,815,919	+		DZA65_RS08590	0.87	+0.3
1,815,920	-		DZA65_RS08590	0.87	-0.5
1,815,920	-		DZA65_RS08590	0.87	-1.5
1,815,923	+		DZA65_RS08590	0.87	-1.5
1,815,923	+		DZA65_RS08590	0.87	-0.2
1,815,923	+		DZA65_RS08590	0.87	-1.1
1,815,923	+		DZA65_RS08590	0.87	-1.2
1,815,923	+		DZA65_RS08590	0.87	-0.7
1,815,923	+		DZA65_RS08590	0.87	-0.6
1,815,923	+		DZA65_RS08590	0.87	-1.6
1,815,924	-		DZA65_RS08590	0.88	+0.7
1,815,924	-		DZA65_RS08590	0.88	+0.5
1,815,924	-		DZA65_RS08590	0.88	+0.3
1,815,924	-		DZA65_RS08590	0.88	+0.9
1,815,924	-		DZA65_RS08590	0.88	+0.7
1,815,924	-		DZA65_RS08590	0.88	+0.4
1,815,924	-		DZA65_RS08590	0.88	-2.3
1,815,959	+		DZA65_RS08590	0.90	-0.7
1,815,959	+		DZA65_RS08590	0.90	-0.3
1,815,959	+		DZA65_RS08590	0.90	-0.3
1,815,960	-		DZA65_RS08590	0.90	+1.3
1,815,960	-		DZA65_RS08590	0.90	-1.3
1,815,960	-		DZA65_RS08590	0.90	+0.3
1,815,991	-				-0.6
1,815,991	-				+0.7
1,815,991	-				+2.5
1,816,064	+				+0.3
1,816,065	-				+0.6
1,816,076	+				+0.8
1,816,076	+				+0.0
1,816,077	-				+1.4
1,816,077	-				-0.1
1,816,077	-				-1.2
1,816,233	-		DZA65_RS08595	0.21	+0.5
1,816,285	+		DZA65_RS08595	0.30	-1.3
1,816,286	-		DZA65_RS08595	0.30	-0.2
1,816,289	-		DZA65_RS08595	0.31	-0.9
1,816,409	-		DZA65_RS08595	0.52	-1.1
1,816,490	-		DZA65_RS08595	0.66	-1.8
1,816,619	-		DZA65_RS08595	0.89	+0.6
1,816,922	+		DZA65_RS08600	0.16	-0.7
1,816,922	+		DZA65_RS08600	0.16	+0.3
1,816,990	+		DZA65_RS08600	0.21	+0.9
1,816,990	+		DZA65_RS08600	0.21	-0.3
1,816,990	+		DZA65_RS08600	0.21	+0.4
1,816,991	-		DZA65_RS08600	0.21	+0.3
1,817,400	+		DZA65_RS08600	0.49	-0.3
1,817,401	-		DZA65_RS08600	0.49	-2.5
1,817,401	-		DZA65_RS08600	0.49	+0.7
1,817,557	+		DZA65_RS08600	0.60	+2.1
1,817,557	+		DZA65_RS08600	0.60	+0.0
1,817,557	+		DZA65_RS08600	0.60	+0.6
1,817,558	-		DZA65_RS08600	0.60	+0.4
1,817,558	-		DZA65_RS08600	0.60	-0.3
1,817,558	-		DZA65_RS08600	0.60	-0.1
1,817,558	-		DZA65_RS08600	0.60	+1.0
1,817,558	-				+1.6
1,818,025	+				+0.7
1,818,026	-				+0.4
1,818,026	-				+0.7
1,818,026	-				-0.9
1,818,026	-				+0.5
1,818,124	+				+0.8
1,818,125	-				+0.1
1,818,125	-				-0.2
1,818,125	-				-0.2
1,818,151	+				+0.5
1,818,151	+				-0.1
1,818,151	+				+0.5
1,818,151	+				+0.9
1,818,151	+				-0.2
1,818,151	+				+0.0
1,818,151	+				+0.3
1,818,151	+				+0.3
1,818,151	+				-1.3
1,818,151	+				+0.0
1,818,151	+				-0.7
1,818,151	+				-0.1
1,818,151	+				+0.9
1,818,151	+				-0.6
1,818,151	+				-0.1
1,818,152	-				-1.7
1,818,152	-				+0.7
1,818,152	-				+0.0
1,818,152	-				-0.2
1,818,152	-				-0.5
1,818,152	-				-0.1
1,818,152	-				+0.6
1,818,169	+				+0.6
1,818,170	-				+0.3
1,818,276	+				-0.2
1,818,276	+				+1.2
1,818,449	+				+1.3
1,818,449	+				-1.2
1,818,449	+				+0.4
1,818,449	+				-0.1
1,818,449	+				-1.1
1,818,450	-				+0.5
1,818,450	-				-2.5
1,818,450	-				-0.4
1,818,450	-				-0.5
1,818,450	-				+0.6
1,818,524	+		DZA65_RS08605	0.11	+1.0
1,818,525	-				-1.3
1,818,539	+		DZA65_RS08605	0.11	-1.1
1,818,540	-				+1.8
1,818,568	+		DZA65_RS08605	0.12	+1.7
1,818,835	+		DZA65_RS08605	0.20	-0.0
1,818,884	+		DZA65_RS08605	0.21	+0.9
1,818,884	+		DZA65_RS08605	0.21	-0.7
1,818,884	+		DZA65_RS08605	0.21	+0.4
1,818,884	+		DZA65_RS08605	0.21	-0.3
1,818,885	-		DZA65_RS08605	0.21	+0.3
1,818,885	-		DZA65_RS08605	0.21	-0.4
1,818,925	+		DZA65_RS08605	0.22	+0.1
1,818,950	+		DZA65_RS08605	0.23	-1.0
1,818,950	+		DZA65_RS08605	0.23	-0.5
1,818,951	-		DZA65_RS08605	0.23	+1.1
1,818,951	-		DZA65_RS08605	0.23	-2.2
1,818,951	-		DZA65_RS08605	0.23	-0.0
1,818,951	-		DZA65_RS08605	0.23	-0.9
1,818,951	-		DZA65_RS08605	0.23	-1.3
1,818,973	+		DZA65_RS08605	0.23	+0.3
1,818,999	-		DZA65_RS08605	0.24	+0.7
1,818,999	-		DZA65_RS08605	0.24	+0.7
1,818,999	-		DZA65_RS08605	0.24	+1.1
1,818,999	-		DZA65_RS08605	0.24	-0.0