Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08430

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,778,571	+				+1.5
1,778,572	-		DZA65_RS08420	0.36	+0.5
1,779,076	-				-0.7
1,779,081	-				+1.5
1,779,110	+				+0.3
1,779,110	+				+0.3
1,779,110	+				+0.1
1,779,111	-				+0.9
1,779,111	-				+1.3
1,779,112	+				+0.8
1,779,118	+				+0.0
1,779,118	+				+0.7
1,779,118	+				-0.7
1,779,118	+				+0.6
1,779,130	-				-1.3
1,779,141	+				-0.3
1,779,141	+				-0.5
1,779,141	+				+1.6
1,779,141	+				+0.4
1,779,141	+				+0.6
1,779,141	+				+2.1
1,779,141	+				-0.8
1,779,141	+				+0.5
1,779,141	+				-2.1
1,779,141	+				-0.6
1,779,141	+				-0.6
1,779,141	+				-0.9
1,779,141	+				+0.3
1,779,141	+				-0.1
1,779,141	+				+0.0
1,779,141	+				-0.5
1,779,141	+				-0.0
1,779,141	+				+0.3
1,779,141	+				+0.9
1,779,142	-				+0.3
1,779,142	-				+0.4
1,779,142	-				-0.3
1,779,142	-				-0.0
1,779,142	-				+0.3
1,779,142	-				-0.0
1,779,142	-				-0.3
1,779,142	-				+1.6
1,779,142	-				-0.1
1,779,142	-				-1.1
1,779,142	-				-2.2
1,779,142	-				+0.3
1,779,142	-				-0.9
1,779,142	-				+0.3
1,779,142	-				-0.6
1,779,142	-				+0.8
1,779,142	-				+0.3
1,779,142	-				-0.3
1,779,142	-				-0.2
1,779,142	-				-1.7
1,779,142	-				+1.6
1,779,314	+		DZA65_RS08425	0.61	+0.7
1,779,314	+		DZA65_RS08425	0.61	-0.2
1,779,315	-		DZA65_RS08425	0.62	-0.4
1,779,494	+				-0.1
1,779,494	+				+0.3
1,779,839	+		DZA65_RS08430	0.50	-0.9
1,779,839	+		DZA65_RS08430	0.50	+0.2
1,779,995	+		DZA65_RS08430	0.69	+0.6
1,779,996	-		DZA65_RS08430	0.69	+0.8
1,779,996	-		DZA65_RS08430	0.69	+1.4
1,780,160	+		DZA65_RS08430	0.88	+0.4
1,780,160	+		DZA65_RS08430	0.88	-0.1
1,780,160	+		DZA65_RS08430	0.88	-0.5
1,780,160	+		DZA65_RS08430	0.88	-0.7
1,780,161	-		DZA65_RS08430	0.89	-0.9
1,780,161	-		DZA65_RS08430	0.89	-0.2
1,780,161	-		DZA65_RS08430	0.89	+0.3
1,780,161	-		DZA65_RS08430	0.89	-0.7
1,780,161	-		DZA65_RS08430	0.89	+0.7
1,780,169	+		DZA65_RS08430	0.90	+0.0
1,780,170	-		DZA65_RS08430	0.90	+0.5
1,780,170	-		DZA65_RS08430	0.90	+0.4
1,780,170	-		DZA65_RS08430	0.90	+0.6
1,780,170	-		DZA65_RS08430	0.90	+1.1
1,780,245	+				+0.6
1,780,246	-				-1.2
1,780,246	-				-0.7
1,780,246	-				-0.7
1,780,262	+				+0.6
1,780,263	-				-0.5
1,780,263	-				+0.1
1,780,263	-				-1.2
1,780,263	-				+1.1
1,780,380	+		DZA65_RS08435	0.16	-0.5
1,780,472	+		DZA65_RS08435	0.27	-2.3
1,780,472	+		DZA65_RS08435	0.27	-1.0
1,780,472	+		DZA65_RS08435	0.27	-0.7
1,780,473	-		DZA65_RS08435	0.28	-1.0
1,780,552	+		DZA65_RS08435	0.37	+1.9
1,780,552	+		DZA65_RS08435	0.37	-0.6
1,780,552	+		DZA65_RS08435	0.37	+0.1
1,780,552	+		DZA65_RS08435	0.37	+0.6
1,780,612	+		DZA65_RS08435	0.45	+1.7
1,780,736	+		DZA65_RS08435	0.60	-0.1
1,780,736	+		DZA65_RS08435	0.60	-0.7
1,780,737	-		DZA65_RS08435	0.61	+1.3
1,780,834	+		DZA65_RS08435	0.73	-0.1
1,780,834	+		DZA65_RS08435	0.73	+1.6
1,780,834	+		DZA65_RS08435	0.73	-0.1
1,780,834	+		DZA65_RS08435	0.73	-1.3
1,780,834	+		DZA65_RS08435	0.73	+0.9
1,780,835	-		DZA65_RS08435	0.73	-1.3
1,780,835	-		DZA65_RS08435	0.73	-0.2
1,780,835	-		DZA65_RS08435	0.73	+1.6
1,780,835	-		DZA65_RS08435	0.73	-1.1
1,780,849	+		DZA65_RS08435	0.75	+0.0
1,780,849	+		DZA65_RS08435	0.75	-0.2
1,780,849	+		DZA65_RS08435	0.75	-0.6
1,780,850	-		DZA65_RS08435	0.75	-0.1
1,781,051	-				+2.5
1,781,076	+				-1.0
1,781,076	+				+0.6
1,781,076	+				-1.7
1,781,077	-				+0.3
1,781,077	-				-0.5
1,781,077	-				+0.5
1,781,077	-				-0.5
1,781,103	-				-0.4
1,781,103	-				-1.1
1,781,103	-				+0.4
1,781,202	-				+0.3
1,781,202	-				+0.2
1,781,238	+				-0.3
1,781,239	-				-0.3