Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08280

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,741,310	+				-0.7
1,741,314	-		DZA65_RS08270	0.54	+0.3
1,741,314	-		DZA65_RS08270	0.54	+0.1
1,741,406	-		DZA65_RS08270	0.77	-0.1
1,741,466	+				-0.3
1,741,467	-				+1.0
1,741,467	-				+0.6
1,741,467	-				+0.4
1,741,502	+				-0.7
1,741,502	+				-0.4
1,741,502	+				-1.1
1,741,502	+				-0.4
1,741,502	+				-0.1
1,741,503	-				+0.1
1,741,503	-				+0.6
1,741,503	-				+0.6
1,741,503	-				+0.6
1,741,589	+		DZA65_RS08275	0.13	+0.1
1,741,589	+		DZA65_RS08275	0.13	-0.9
1,741,589	+		DZA65_RS08275	0.13	+0.0
1,741,589	+		DZA65_RS08275	0.13	+0.3
1,741,589	+		DZA65_RS08275	0.13	+0.5
1,741,590	-		DZA65_RS08275	0.13	-1.7
1,741,590	-		DZA65_RS08275	0.13	-0.6
1,741,590	-		DZA65_RS08275	0.13	-0.6
1,741,649	+		DZA65_RS08275	0.21	-0.8
1,741,649	+		DZA65_RS08275	0.21	-1.3
1,741,649	+		DZA65_RS08275	0.21	+2.6
1,741,650	-		DZA65_RS08275	0.21	+0.7
1,741,650	-		DZA65_RS08275	0.21	-0.3
1,741,655	+		DZA65_RS08275	0.22	+0.6
1,741,655	+		DZA65_RS08275	0.22	-0.5
1,742,070	+		DZA65_RS08275	0.81	+0.5
1,742,090	+		DZA65_RS08275	0.84	-2.1
1,742,090	+		DZA65_RS08275	0.84	+0.1
1,742,091	-		DZA65_RS08275	0.84	-1.2
1,742,091	-		DZA65_RS08275	0.84	+0.9
1,742,184	+				-1.5
1,742,185	-				-2.1
1,742,199	+				-0.3
1,742,199	+				-0.2
1,742,199	+				-0.4
1,742,200	-				-0.2
1,742,200	-				-0.8
1,742,203	-				-0.7
1,742,203	-				-1.3
1,742,203	-				-0.1
1,742,214	+				-0.1
1,742,214	+				+0.3
1,742,215	-				+0.0
1,742,215	-				+0.4
1,742,369	+		DZA65_RS08280	0.19	-0.4
1,742,369	+		DZA65_RS08280	0.19	+1.7
1,742,369	+		DZA65_RS08280	0.19	+1.3
1,742,369	+		DZA65_RS08280	0.19	-0.4
1,742,370	-		DZA65_RS08280	0.19	+1.5
1,742,398	+		DZA65_RS08280	0.22	+0.4
1,742,398	+		DZA65_RS08280	0.22	+1.6
1,742,399	-		DZA65_RS08280	0.22	-0.9
1,742,399	-		DZA65_RS08280	0.22	-0.3
1,742,399	-		DZA65_RS08280	0.22	+0.9
1,742,399	-		DZA65_RS08280	0.22	+0.2
1,742,431	+		DZA65_RS08280	0.26	+1.0
1,742,469	+		DZA65_RS08280	0.30	-1.3
1,742,470	-		DZA65_RS08280	0.31	+0.4
1,742,542	+		DZA65_RS08280	0.39	+0.1
1,742,542	+		DZA65_RS08280	0.39	+0.9
1,742,542	+		DZA65_RS08280	0.39	-0.1
1,742,542	+		DZA65_RS08280	0.39	+0.3
1,742,542	+		DZA65_RS08280	0.39	-0.1
1,742,542	+		DZA65_RS08280	0.39	-0.3
1,742,542	+		DZA65_RS08280	0.39	+0.7
1,742,542	+		DZA65_RS08280	0.39	-0.7
1,742,542	+		DZA65_RS08280	0.39	-1.7
1,742,543	-		DZA65_RS08280	0.39	+0.8
1,742,543	-		DZA65_RS08280	0.39	-0.5
1,742,543	-		DZA65_RS08280	0.39	+0.7
1,742,543	-		DZA65_RS08280	0.39	-0.2
1,742,543	-		DZA65_RS08280	0.39	+2.3
1,742,543	-		DZA65_RS08280	0.39	-0.2
1,742,545	+		DZA65_RS08280	0.40	-1.2
1,742,545	+		DZA65_RS08280	0.40	+1.1
1,742,545	+		DZA65_RS08280	0.40	+1.9
1,742,545	+		DZA65_RS08280	0.40	-0.1
1,742,545	+		DZA65_RS08280	0.40	-0.4
1,742,545	+		DZA65_RS08280	0.40	+1.1
1,742,545	+		DZA65_RS08280	0.40	-0.4
1,742,545	+		DZA65_RS08280	0.40	+0.5
1,742,545	+		DZA65_RS08280	0.40	+1.1
1,742,546	-		DZA65_RS08280	0.40	+0.5
1,742,546	-		DZA65_RS08280	0.40	+1.3
1,742,546	-		DZA65_RS08280	0.40	+1.0
1,742,546	-		DZA65_RS08280	0.40	-1.0
1,742,606	-		DZA65_RS08280	0.47	-2.1
1,742,743	+		DZA65_RS08280	0.63	-0.7
1,742,745	+		DZA65_RS08280	0.63	+0.5
1,742,746	-		DZA65_RS08280	0.63	-0.3
1,742,751	-		DZA65_RS08280	0.64	-0.1
1,742,751	-		DZA65_RS08280	0.64	+0.9
1,743,036	+				+0.9
1,743,036	+				+0.3
1,743,036	+				-1.4
1,743,072	-				+1.8
1,743,112	+				+1.2
1,743,112	+				-0.5
1,743,113	-				+0.5
1,743,151	+				+0.5
1,743,151	+				+0.0
1,743,152	-				-0.5
1,743,152	-				+0.7
1,743,152	-				+1.8
1,743,152	-				+0.0
1,743,208	-				-0.2
1,743,208	-				-1.6
1,743,240	+				+0.0
1,743,364	+				+0.4
1,743,430	-				-0.1
1,743,477	+				-1.3
1,743,478	-				+0.1
1,743,480	+				+0.6
1,743,536	+				+0.6
1,743,537	-				+0.8
1,743,583	+				-1.7
1,743,635	+				-1.0
1,743,762	-		DZA65_RS08285	0.22	-0.3
1,743,762	-		DZA65_RS08285	0.22	-1.5
1,743,785	+		DZA65_RS08285	0.25	+0.6
1,743,811	+		DZA65_RS08285	0.27	-0.7
1,743,811	+		DZA65_RS08285	0.27	+0.4
1,743,811	+		DZA65_RS08285	0.27	-0.3
1,743,811	+		DZA65_RS08285	0.27	-0.0
1,743,812	-		DZA65_RS08285	0.27	-0.5
1,743,812	-		DZA65_RS08285	0.27	+1.7
1,743,812	-		DZA65_RS08285	0.27	+0.3
1,743,812	-		DZA65_RS08285	0.27	+0.0
1,743,812	-		DZA65_RS08285	0.27	+0.5
1,743,822	+		DZA65_RS08285	0.28	+1.0
1,743,822	+		DZA65_RS08285	0.28	+1.0
1,743,822	+		DZA65_RS08285	0.28	-0.2
1,743,822	+		DZA65_RS08285	0.28	+0.3
1,743,822	+		DZA65_RS08285	0.28	-0.2
1,743,822	+		DZA65_RS08285	0.28	+0.1
1,743,823	-		DZA65_RS08285	0.28	-0.1
1,743,843	-		DZA65_RS08285	0.30	-0.1
1,743,909	+		DZA65_RS08285	0.37	+1.1
1,743,909	+		DZA65_RS08285	0.37	-1.3
1,743,955	+		DZA65_RS08285	0.41	-0.9
1,743,955	+		DZA65_RS08285	0.41	+0.6
1,743,956	-		DZA65_RS08285	0.42	-0.4
1,743,956	-		DZA65_RS08285	0.42	+1.0
1,743,956	-		DZA65_RS08285	0.42	+0.3
1,743,956	-		DZA65_RS08285	0.42	-0.1