Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07575

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,578,138	+		DZA65_RS07560	0.18	-1.0
1,578,175	+		DZA65_RS07560	0.34	-0.9
1,578,175	+		DZA65_RS07560	0.34	-0.4
1,578,179	-		DZA65_RS07560	0.35	+0.3
1,578,227	+		DZA65_RS07560	0.56	-0.4
1,578,277	-		DZA65_RS07560	0.77	+0.9
1,578,330	-				+0.3
1,578,330	-				+0.3
1,578,347	+				-1.7
1,578,349	+				+0.3
1,578,405	+		DZA65_RS07565	0.23	-0.9
1,578,419	+		DZA65_RS07565	0.27	+0.3
1,578,553	-		DZA65_RS07565	0.70	+0.1
1,578,553	-		DZA65_RS07565	0.70	-0.6
1,578,553	-		DZA65_RS07565	0.70	+0.5
1,578,553	-		DZA65_RS07565	0.70	-1.7
1,578,553	-		DZA65_RS07565	0.70	-0.9
1,578,724	+				+0.7
1,578,749	-				-0.5
1,578,781	+				-1.3
1,578,782	-				-0.7
1,578,847	+				-2.1
1,578,847	+				-0.5
1,578,848	-				-0.4
1,578,848	-				-0.0
1,578,848	-				+0.3
1,578,848	-				+2.2
1,578,848	-				+1.0
1,578,848	-				-0.7
1,578,880	+				+0.3
1,578,880	+				+0.0
1,578,880	+				-0.2
1,578,881	-				-1.3
1,578,900	+				-0.4
1,578,900	+				-0.2
1,578,901	-				-0.2
1,578,906	+				+0.1
1,578,906	+				+0.1
1,578,907	-				-1.3
1,578,909	+				+1.6
1,578,909	+				+0.6
1,578,909	+				-1.3
1,578,909	+				+0.3
1,578,913	+				-2.2
1,578,913	+				+0.7
1,578,914	-				+1.3
1,578,914	-				-2.9
1,578,941	+				+1.3
1,578,941	+				+0.1
1,578,941	+				-1.1
1,578,942	-				+1.3
1,578,942	-				-0.3
1,578,953	+				-0.2
1,578,954	-				+1.0
1,578,983	+				+0.8
1,578,983	+				+1.2
1,578,984	-				-0.0
1,578,984	-				-0.3
1,578,984	-				+0.5
1,579,067	+				-0.9
1,579,068	-				+0.1
1,579,068	-				-0.0
1,579,068	-				-0.9
1,579,068	-				-0.2
1,579,068	-				-0.2
1,579,071	+				+1.6
1,579,071	+				-0.5
1,579,071	+				+0.1
1,579,071	+				-0.9
1,579,071	+				-1.3
1,579,071	+				-0.2
1,579,071	+				-0.4
1,579,071	+				-0.3
1,579,072	-				-0.6
1,579,072	-				-0.6
1,579,072	-				-1.1
1,579,072	-				-0.0
1,579,072	-				-2.0
1,579,072	-				+0.3
1,579,072	-				+1.3
1,579,072	-				-0.2
1,579,072	-				+0.6
1,579,072	-				+0.5
1,579,085	+				-0.5
1,579,159	+				+1.0
1,579,160	-				-3.8
1,579,167	+				+0.0
1,579,168	-				+0.3
1,579,168	-				+2.2
1,579,168	-				-0.9
1,579,184	-				+0.1
1,579,198	+				+2.0
1,579,198	+				-0.7
1,579,217	+		DZA65_RS07575	0.11	-0.2
1,579,268	+		DZA65_RS07575	0.18	-0.6
1,579,271	+		DZA65_RS07575	0.18	-0.0
1,579,271	+		DZA65_RS07575	0.18	+0.9
1,579,391	-		DZA65_RS07575	0.34	-0.1
1,579,484	+		DZA65_RS07575	0.45	-1.7
1,579,484	+		DZA65_RS07575	0.45	-0.6
1,579,511	-		DZA65_RS07575	0.49	+0.8
1,579,571	+		DZA65_RS07575	0.57	-0.7
1,579,600	-		DZA65_RS07575	0.60	+0.2
1,579,600	-		DZA65_RS07575	0.60	-2.5
1,579,601	+		DZA65_RS07575	0.60	-1.5
1,579,724	+		DZA65_RS07575	0.76	+1.1
1,579,725	-		DZA65_RS07575	0.76	-0.7
1,579,733	+		DZA65_RS07575	0.77	-1.7
1,579,742	+		DZA65_RS07575	0.78	-1.0
1,579,814	+		DZA65_RS07575	0.88	-0.1
1,579,815	-		DZA65_RS07575	0.88	-1.1
1,579,818	+		DZA65_RS07575	0.88	+0.0
1,579,959	-				-0.6
1,579,984	+				-0.9
1,580,033	-				-2.0
1,580,090	+				-2.5
1,580,090	+				+0.5
1,580,091	-				+0.1
1,580,095	-				-0.9
1,580,113	-				-0.5
1,580,126	+				-0.1
1,580,127	-				-1.0
1,580,131	+				+0.3
1,580,131	+				-1.0
1,580,131	+				-0.1
1,580,131	+				+0.4
1,580,132	-				-2.3
1,580,132	-				+1.1
1,580,132	-				-0.4
1,580,137	-				+0.1
1,580,199	-				+1.0
1,580,204	+				-1.3
1,580,241	+				-2.6
1,580,242	-				-1.3
1,580,243	+				-1.1
1,580,243	+				-1.3
1,580,244	-				+0.9
1,580,244	-				+0.2
1,580,366	+		DZA65_RS07580	0.23	-0.5
1,580,367	-		DZA65_RS07580	0.23	-0.7
1,580,367	-		DZA65_RS07580	0.23	+0.6
1,580,375	+		DZA65_RS07580	0.24	+0.2
1,580,375	+		DZA65_RS07580	0.24	-2.3
1,580,375	+		DZA65_RS07580	0.24	+1.3
1,580,375	+		DZA65_RS07580	0.24	-0.0
1,580,404	+		DZA65_RS07580	0.28	-1.1
1,580,404	+		DZA65_RS07580	0.28	+0.3
1,580,405	-		DZA65_RS07580	0.28	+0.3
1,580,472	+		DZA65_RS07580	0.37	+0.1
1,580,525	+		DZA65_RS07580	0.44	+1.5
1,580,525	+		DZA65_RS07580	0.44	-0.1
1,580,526	-		DZA65_RS07580	0.44	-0.6
1,580,526	-		DZA65_RS07580	0.44	+0.3
1,580,557	+		DZA65_RS07580	0.48	+0.2
1,580,590	-		DZA65_RS07580	0.53	+0.3
1,580,623	+		DZA65_RS07580	0.57	-0.7
1,580,624	-		DZA65_RS07580	0.57	+1.0
1,580,624	-		DZA65_RS07580	0.57	-0.5
1,580,686	+		DZA65_RS07580	0.65	+0.0
1,580,687	-		DZA65_RS07580	0.66	-0.5
1,580,689	+		DZA65_RS07580	0.66	-0.7
1,580,765	-		DZA65_RS07580	0.76	-0.9
1,580,801	+		DZA65_RS07580	0.81	+0.8
1,580,801	+		DZA65_RS07580	0.81	-3.3
1,580,801	+		DZA65_RS07580	0.81	+0.3
1,580,820	+		DZA65_RS07580	0.83	-0.5
1,580,859	-		DZA65_RS07580	0.89	-0.9