Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS06440

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,341,172	+				+0.3
1,341,172	+				+0.9
1,341,172	+				+0.1
1,341,172	+				+1.2
1,341,172	+				-0.1
1,341,172	+				-0.6
1,341,173	-				+1.1
1,341,173	-				+0.4
1,341,173	-				+1.0
1,341,173	-				-1.0
1,341,173	-				+0.6
1,341,173	-				-1.2
1,341,181	+				-0.5
1,341,181	+				-0.2
1,341,181	+				+1.0
1,341,182	-				+0.1
1,341,182	-				-0.6
1,341,182	-				-0.7
1,341,182	-				-0.1
1,341,182	-				-0.1
1,341,182	-				+0.8
1,341,216	+				-0.3
1,341,216	+				+1.0
1,341,216	+				+0.7
1,341,217	-				+0.1
1,341,217	-				+1.4
1,341,217	-				-0.7
1,341,217	-				+0.0
1,341,217	-				-0.4
1,341,230	+				+0.9
1,341,231	-				-1.5
1,341,231	-				+1.0
1,341,231	-				-0.1
1,341,231	-				-0.1
1,341,231	-				-0.0
1,341,256	+				-0.2
1,341,256	+				+0.9
1,341,256	+				+0.4
1,341,256	+				+0.8
1,341,257	-				+0.8
1,341,257	-				-0.3
1,341,257	-				+0.4
1,341,257	-				-0.9
1,341,262	+				+0.0
1,341,262	+				-0.1
1,341,263	-				+0.2
1,341,263	-				-0.9
1,341,263	-				-1.2
1,341,332	+				+0.7
1,341,332	+				-0.0
1,341,332	+				+0.4
1,341,332	+				-1.2
1,341,332	+				+0.1
1,341,333	-				-1.9
1,341,333	-				-0.1
1,341,337	+				-0.3
1,342,079	-				+0.2
1,342,099	-				+0.4
1,342,132	-		DZA65_RS06440	0.12	+3.3
1,342,244	+		DZA65_RS06440	0.43	+0.4
1,342,245	-		DZA65_RS06440	0.43	-0.0
1,342,246	+		DZA65_RS06440	0.44	+1.4
1,342,247	-		DZA65_RS06440	0.44	+0.4
1,342,247	-		DZA65_RS06440	0.44	+0.0
1,342,247	-		DZA65_RS06440	0.44	+0.4
1,342,247	-		DZA65_RS06440	0.44	+1.2
1,342,247	-		DZA65_RS06440	0.44	-0.4
1,342,308	+		DZA65_RS06440	0.61	-0.2
1,342,344	-		DZA65_RS06440	0.71	-0.3
1,342,419	+				+0.7
1,342,419	+				+2.0
1,342,424	+				-0.6
1,342,424	+				+0.5
1,342,424	+				+0.0
1,342,424	+				+0.9
1,342,424	+				-1.1
1,342,424	+				+0.5
1,342,425	-				+2.0
1,342,428	+				+0.1
1,342,428	+				-0.2
1,342,428	+				-0.1
1,342,428	+				+0.9
1,342,428	+				+0.4
1,342,428	+				-1.2
1,342,429	-				-0.8
1,342,429	-				+0.9
1,342,429	-				+0.8
1,342,429	-				+0.2
1,342,429	-				+0.7
1,342,429	-				+0.7
1,342,429	-				-0.2
1,342,453	+				+0.1
1,342,453	+				+0.1
1,342,454	-				-1.7
1,342,650	+		DZA65_RS06445	0.13	-0.5
1,342,650	+		DZA65_RS06445	0.13	+0.7
1,342,651	-		DZA65_RS06445	0.13	-0.3
1,342,652	+		DZA65_RS06445	0.13	-1.0
1,342,652	+		DZA65_RS06445	0.13	-1.1
1,342,653	-		DZA65_RS06445	0.13	+0.2
1,342,680	+		DZA65_RS06445	0.15	+0.3
1,342,680	+		DZA65_RS06445	0.15	+0.2
1,342,680	+		DZA65_RS06445	0.15	+0.1
1,342,714	+		DZA65_RS06445	0.17	-1.2
1,342,714	+		DZA65_RS06445	0.17	-1.4
1,342,714	+		DZA65_RS06445	0.17	-2.1
1,342,715	-		DZA65_RS06445	0.17	-0.9
1,342,715	-		DZA65_RS06445	0.17	+1.8
1,342,715	-		DZA65_RS06445	0.17	-0.3
1,342,715	-		DZA65_RS06445	0.17	+0.9
1,342,715	-		DZA65_RS06445	0.17	-0.6
1,342,720	+		DZA65_RS06445	0.18	-1.3
1,342,720	+		DZA65_RS06445	0.18	-0.3
1,342,720	+		DZA65_RS06445	0.18	-0.6
1,342,720	+		DZA65_RS06445	0.18	+0.1
1,342,720	+				+1.0
1,342,720	+		DZA65_RS06445	0.18	-0.6
1,342,720	+		DZA65_RS06445	0.18	+0.4
1,342,720	+		DZA65_RS06445	0.18	+0.9
1,342,720	+		DZA65_RS06445	0.18	-0.5
1,342,721	-		DZA65_RS06445	0.18	-0.1
1,342,721	-		DZA65_RS06445	0.18	-0.1
1,342,721	-		DZA65_RS06445	0.18	+0.3
1,342,721	-		DZA65_RS06445	0.18	+0.3
1,342,951	+		DZA65_RS06445	0.33	+0.2
1,342,951	+		DZA65_RS06445	0.33	+0.5
1,342,987	+		DZA65_RS06445	0.36	+1.0
1,343,050	+		DZA65_RS06445	0.40	-2.6
1,343,051	-		DZA65_RS06445	0.40	-2.8
1,343,071	+		DZA65_RS06445	0.42	+0.2
1,343,071	+		DZA65_RS06445	0.42	-0.1
1,343,071	+		DZA65_RS06445	0.42	-0.6
1,343,071	+		DZA65_RS06445	0.42	+0.3
1,343,072	-		DZA65_RS06445	0.42	+0.2
1,343,072	-		DZA65_RS06445	0.42	-0.2
1,343,072	-		DZA65_RS06445	0.42	-1.6
1,343,072	-		DZA65_RS06445	0.42	-0.5
1,343,072	-		DZA65_RS06445	0.42	-0.2
1,343,076	-		DZA65_RS06445	0.42	+0.1
1,343,076	-		DZA65_RS06445	0.42	-0.0
1,343,221	+		DZA65_RS06445	0.52	+0.6