Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS06350

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,320,792	+				+0.1
1,320,792	+				-0.2
1,320,792	+				+0.0
1,320,792	+				-1.6
1,320,793	-				+0.6
1,320,847	+				+0.8
1,320,848	-				-1.5
1,320,848	-				-3.0
1,320,848	-				-3.5
1,320,848	-				+1.4
1,320,859	+				+0.1
1,320,859	+				+1.5
1,320,859	+				-0.3
1,320,860	-				-0.7
1,320,860	-				+1.7
1,320,860	-				-1.3
1,320,874	+				-0.6
1,321,012	-		DZA65_RS06345	0.20	+0.4
1,321,171	-		DZA65_RS06345	0.38	-2.0
1,321,308	+		DZA65_RS06345	0.54	+0.5
1,321,309	-		DZA65_RS06345	0.54	+0.5
1,321,365	-		DZA65_RS06345	0.61	-1.9
1,321,453	+		DZA65_RS06345	0.71	-0.9
1,321,453	+		DZA65_RS06345	0.71	+0.1
1,321,453	+		DZA65_RS06345	0.71	-0.6
1,321,454	-		DZA65_RS06345	0.71	-0.6
1,321,454	-		DZA65_RS06345	0.71	-0.2
1,321,454	-		DZA65_RS06345	0.71	+0.1
1,321,454	-		DZA65_RS06345	0.71	+0.9
1,321,454	-		DZA65_RS06345	0.71	-1.6
1,321,529	+		DZA65_RS06345	0.80	+0.6
1,321,543	+		DZA65_RS06345	0.81	-2.4
1,321,543	+		DZA65_RS06345	0.81	+0.2
1,321,544	-		DZA65_RS06345	0.81	+1.1
1,321,612	+		DZA65_RS06345	0.89	-0.4
1,321,612	+		DZA65_RS06345	0.89	-0.6
1,321,612	+		DZA65_RS06345	0.89	+0.7
1,321,613	-		DZA65_RS06345	0.89	+0.0
1,321,613	-		DZA65_RS06345	0.89	-0.0
1,321,673	+				-1.1
1,321,673	+				-1.0
1,321,673	+				-0.6
1,321,673	+				-0.7
1,321,674	-				-0.4
1,321,698	+				-2.8
1,321,698	+				+1.1
1,321,698	+				+1.1
1,321,699	-				+0.3
1,321,699	-				+0.3
1,321,699	-				-1.0
1,321,699	-				+0.7
1,321,699	-				-1.2
1,321,729	+				+0.1
1,321,729	+				+0.2
1,321,729	+				-1.3
1,321,729	+				-0.9
1,321,730	-				+1.5
1,321,730	-				+0.4
1,321,732	+				-0.3
1,321,732	+				-0.4
1,321,733	-				-0.7
1,321,733	-				-0.0
1,321,733	-				-0.0
1,321,928	-		DZA65_RS06350	0.21	-0.5
1,321,964	-		DZA65_RS06350	0.25	+1.0
1,322,030	+		DZA65_RS06350	0.34	+0.3
1,322,030	+		DZA65_RS06350	0.34	-2.6
1,322,030	+		DZA65_RS06350	0.34	+0.4
1,322,030	+		DZA65_RS06350	0.34	+0.5
1,322,030	+		DZA65_RS06350	0.34	-1.9
1,322,031	-		DZA65_RS06350	0.34	+0.4
1,322,031	-		DZA65_RS06350	0.34	-0.6
1,322,031	-				+1.0
1,322,031	-		DZA65_RS06350	0.34	+2.7
1,322,031	-		DZA65_RS06350	0.34	-0.8
1,322,091	+		DZA65_RS06350	0.42	+0.3
1,322,091	+		DZA65_RS06350	0.42	+0.1
1,322,092	-		DZA65_RS06350	0.42	+0.3
1,322,158	+		DZA65_RS06350	0.50	+0.9
1,322,159	-		DZA65_RS06350	0.51	+0.5
1,322,283	+		DZA65_RS06350	0.67	+2.8
1,322,316	+		DZA65_RS06350	0.71	+0.5
1,322,317	-		DZA65_RS06350	0.71	-1.6
1,322,338	+		DZA65_RS06350	0.74	-0.4
1,322,338	+		DZA65_RS06350	0.74	-0.1
1,322,542	+				+0.6
1,322,543	-				+0.3
1,322,548	+				-1.1
1,322,548	+				+0.1
1,322,548	+				+0.7
1,322,565	+				-0.1
1,322,565	+				-1.0
1,322,565	+				+0.2
1,322,570	-				-2.6
1,322,608	-				+1.2
1,322,617	+				+0.5
1,322,617	+				+2.0
1,322,618	-				+0.2
1,322,719	-		DZA65_RS06355	0.18	-1.3
1,322,752	+		DZA65_RS06355	0.23	+0.3
1,322,752	+		DZA65_RS06355	0.23	+0.4
1,322,752	+		DZA65_RS06355	0.23	-0.6
1,322,753	-		DZA65_RS06355	0.23	-0.6
1,322,800	+		DZA65_RS06355	0.30	-0.5
1,322,803	-		DZA65_RS06355	0.31	+0.6
1,322,803	-		DZA65_RS06355	0.31	+0.1
1,322,803	-		DZA65_RS06355	0.31	-0.8
1,322,814	+		DZA65_RS06355	0.32	-1.2
1,322,814	+		DZA65_RS06355	0.32	+0.7
1,322,814	+		DZA65_RS06355	0.32	-1.7
1,322,843	+		DZA65_RS06355	0.37	-0.0
1,322,875	+		DZA65_RS06355	0.42	-0.1
1,322,876	-		DZA65_RS06355	0.42	+0.6
1,322,876	-		DZA65_RS06355	0.42	-0.4
1,322,876	-		DZA65_RS06355	0.42	-0.6
1,322,876	-		DZA65_RS06355	0.42	+0.5
1,322,876	-		DZA65_RS06355	0.42	-1.3
1,323,118	+		DZA65_RS06355	0.80	+1.6
1,323,119	-		DZA65_RS06355	0.80	-0.4
1,323,134	+		DZA65_RS06355	0.82	-0.3
1,323,135	-		DZA65_RS06355	0.82	-0.1
1,323,135	-		DZA65_RS06355	0.82	-0.5
1,323,160	+		DZA65_RS06355	0.86	+1.1
1,323,160	+		DZA65_RS06355	0.86	+0.8
1,323,160	+		DZA65_RS06355	0.86	+0.3
1,323,160	+		DZA65_RS06355	0.86	+0.5
1,323,161	-		DZA65_RS06355	0.86	-0.0
1,323,200	+				-0.4
1,323,201	-				+0.1
1,323,201	-				+0.6
1,323,214	+				+0.4
1,323,215	-				+0.9
1,323,215	-				-0.6
1,323,250	+				-0.8
1,323,250	+				+0.6
1,323,250	+				-0.3
1,323,251	-				-0.1
1,323,254	-				-0.4
1,323,254	-				-0.1
1,323,254	-				-0.4
1,323,505	+		DZA65_RS06360	0.42	-1.2
1,323,505	+		DZA65_RS06360	0.42	+0.7
1,323,506	-		DZA65_RS06360	0.42	-1.0
1,323,506	-		DZA65_RS06360	0.42	-2.4