Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS06185

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,278,705	+				+2.0
1,278,720	+				+0.1
1,278,720	+				-0.8
1,278,720	+				+0.9
1,278,720	+				+1.0
1,278,720	+				-0.7
1,278,720	+				-0.2
1,278,720	+				+0.3
1,278,720	+				-0.2
1,278,720	+				-1.1
1,278,720	+				+0.5
1,278,721	-				+0.4
1,278,721	-				-2.5
1,278,721	-				+0.3
1,278,721	-				+0.5
1,278,721	-				-0.4
1,278,721	-				+1.4
1,278,721	-				+0.3
1,278,721	-				-0.3
1,278,721	-				+0.8
1,278,721	-				-0.6
1,278,735	+				+1.4
1,278,735	+				-0.3
1,278,735	+				-1.2
1,278,735	+				-0.6
1,278,735	+				+0.3
1,278,736	-				+1.0
1,278,736	-				+0.7
1,278,777	-				-0.0
1,278,787	+				+0.4
1,278,787	+				+0.0
1,278,787	+				+0.8
1,278,787	+				+0.4
1,278,788	-				-0.3
1,278,822	+				-0.3
1,278,822	+				-0.0
1,278,822	+				-0.6
1,278,822	+				-0.6
1,278,823	-				-2.8
1,278,823	-				+1.0
1,278,823	-				+0.1
1,278,823	-				+0.8
1,278,823	-				-0.1
1,278,886	-				-0.4
1,278,890	+				+0.1
1,278,890	+				+0.6
1,278,890	+				-2.0
1,278,890	+				-3.4
1,278,890	+				+0.6
1,278,891	-				-0.6
1,278,891	-				+0.6
1,278,891	-				-0.9
1,278,891	-				-1.2
1,278,891	-				+0.6
1,278,891	-				+0.7
1,278,908	+				-0.2
1,278,908	+				+0.1
1,278,908	+				+1.7
1,278,908	+				-0.7
1,278,908	+				-0.4
1,278,909	-				+1.1
1,279,075	+		DZA65_RS06185	0.18	-0.3
1,279,075	+		DZA65_RS06185	0.18	+0.3
1,279,075	+		DZA65_RS06185	0.18	+0.4
1,279,076	-				-1.2
1,279,076	-		DZA65_RS06185	0.18	-2.2
1,279,135	+		DZA65_RS06185	0.21	-0.5
1,279,148	+		DZA65_RS06185	0.22	-1.1
1,279,148	+				+1.0
1,279,149	-		DZA65_RS06185	0.22	-0.4
1,279,149	-		DZA65_RS06185	0.22	+0.5
1,279,174	+		DZA65_RS06185	0.24	-0.4
1,279,174	+		DZA65_RS06185	0.24	+1.1
1,279,175	-		DZA65_RS06185	0.24	-1.4
1,279,175	-		DZA65_RS06185	0.24	+1.2
1,279,184	+		DZA65_RS06185	0.24	-0.9
1,279,184	+		DZA65_RS06185	0.24	+2.3
1,279,185	-		DZA65_RS06185	0.24	-2.2
1,279,289	+		DZA65_RS06185	0.30	+0.4
1,279,289	+		DZA65_RS06185	0.30	-0.7
1,279,410	+		DZA65_RS06185	0.38	-0.2
1,279,410	+		DZA65_RS06185	0.38	+0.2
1,279,411	-		DZA65_RS06185	0.38	-0.5
1,279,486	+		DZA65_RS06185	0.42	+1.4
1,279,776	+		DZA65_RS06185	0.59	-1.2
1,279,777	-		DZA65_RS06185	0.59	+0.3
1,279,777	-		DZA65_RS06185	0.59	-1.0
1,279,777	-		DZA65_RS06185	0.59	+0.2
1,279,857	+		DZA65_RS06185	0.64	+1.0
1,279,884	+		DZA65_RS06185	0.66	-0.0
1,279,884	+		DZA65_RS06185	0.66	+0.2
1,279,885	-		DZA65_RS06185	0.66	-1.9
1,279,915	-		DZA65_RS06185	0.68	+0.9
1,280,290	+		DZA65_RS06185	0.90	-1.6
1,280,299	-				+0.4
1,280,370	+				-2.3
1,280,370	+				+0.7
1,280,370	+				+0.5
1,280,370	+				-0.2
1,280,371	-				+0.9
1,280,371	-				+0.5
1,280,414	-				+1.4
1,280,451	+				-0.8
1,280,451	+				-1.3
1,280,452	-				-1.6
1,280,452	-				-0.3
1,280,452	-				-1.4
1,280,555	+				-1.0
1,280,555	+				+0.3
1,280,555	+				-0.5
1,280,555	+				+0.4
1,280,555	+				+0.2
1,280,555	+				+0.4
1,280,556	-				+0.2
1,280,556	-				-2.8
1,280,556	-				+0.5
1,280,556	-				+0.4
1,280,556	-				-0.5
1,280,556	-				+0.5
1,280,556	-				+1.1
1,280,556	-				+0.9
1,280,556	-				+0.5
1,280,559	+				-0.2
1,280,559	+				+1.0
1,280,560	-				-0.6
1,280,560	-				+0.7
1,280,590	+				+0.3
1,280,590	+				+1.0
1,280,591	-				-0.8
1,280,592	+				+0.4
1,280,658	+				+0.2
1,280,658	+				-0.9
1,280,659	-				-1.9
1,280,676	+				-2.8
1,280,729	+				+0.2
1,280,729	+				-0.6
1,280,729	+				-1.9
1,280,730	-				+0.3
1,280,731	+				-0.2
1,280,731	+				+0.8
1,280,733	+				-0.7
1,280,787	+				-0.6
1,280,787	+				-0.8
1,280,787	+				-0.8
1,280,788	-				+0.7
1,280,815	+				-0.4
1,280,816	-				+0.9
1,280,816	-				-0.0
1,280,826	+				-1.0
1,280,826	+				+0.4
1,280,826	+				-0.3
1,280,826	+				+0.1
1,280,827	-				+0.3
1,280,829	+				-1.6
1,280,871	+				+0.6
1,280,872	-				-0.7
1,280,872	-				-0.5
1,280,872	-				-0.3
1,280,901	+				-0.8
1,280,926	+				-0.8
1,280,927	-				+0.3
1,280,940	+				-0.2
1,280,941	-				+0.2
1,281,002	-				+0.4
1,281,033	+				+1.3
1,281,033	+				+0.4
1,281,034	-				-0.2
1,281,063	+				-0.0
1,281,064	-				-0.6
1,281,064	-				+0.3
1,281,083	+				-0.1
1,281,083	+				+1.4
1,281,084	-				+0.1
1,281,222	-		DZA65_RS06190	0.15	-2.8
1,281,295	-		DZA65_RS06190	0.20	+1.9
1,281,295	-		DZA65_RS06190	0.20	-1.4
1,281,295	-		DZA65_RS06190	0.20	+1.3
1,281,344	-		DZA65_RS06190	0.23	+0.8