Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS06170 and DZA65_RS06175 are separated by 255 nucleotides DZA65_RS06175 and DZA65_RS06180 are separated by 224 nucleotides
DZA65_RS06170: DZA65_RS06170 - molecular chaperone HtpG, at 1,274,734 to 1,276,617
_RS06170
DZA65_RS06175: DZA65_RS06175 - adenylate kinase, at 1,276,873 to 1,277,520
_RS06175
DZA65_RS06180: DZA65_RS06180 - ferrochelatase, at 1,277,745 to 1,278,707
_RS06180
Position (kb)
1276
1277
1278 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1275.998 kb on - strand, within DZA65_RS06170 at 1276.033 kb on + strand, within DZA65_RS06170 at 1276.034 kb on - strand, within DZA65_RS06170 at 1276.036 kb on + strand, within DZA65_RS06170 at 1276.036 kb on + strand, within DZA65_RS06170 at 1276.036 kb on + strand, within DZA65_RS06170 at 1276.036 kb on + strand, within DZA65_RS06170 at 1276.037 kb on - strand, within DZA65_RS06170 at 1276.037 kb on - strand, within DZA65_RS06170 at 1276.037 kb on - strand, within DZA65_RS06170 at 1276.037 kb on - strand, within DZA65_RS06170 at 1276.037 kb on - strand, within DZA65_RS06170 at 1276.037 kb on - strand, within DZA65_RS06170 at 1276.037 kb on - strand, within DZA65_RS06170 at 1276.054 kb on + strand, within DZA65_RS06170 at 1276.054 kb on + strand, within DZA65_RS06170 at 1276.055 kb on - strand, within DZA65_RS06170 at 1276.153 kb on + strand, within DZA65_RS06170 at 1276.153 kb on + strand, within DZA65_RS06170 at 1276.154 kb on - strand, within DZA65_RS06170 at 1276.174 kb on - strand, within DZA65_RS06170 at 1276.174 kb on - strand, within DZA65_RS06170 at 1276.439 kb on - strand at 1276.439 kb on - strand at 1276.560 kb on + strand at 1276.604 kb on + strand at 1276.605 kb on - strand at 1276.622 kb on + strand at 1276.622 kb on + strand at 1276.622 kb on + strand at 1276.622 kb on + strand at 1276.710 kb on + strand at 1276.710 kb on + strand at 1276.710 kb on + strand at 1276.711 kb on - strand at 1276.711 kb on - strand at 1276.711 kb on - strand at 1276.711 kb on - strand at 1276.711 kb on - strand at 1276.758 kb on + strand at 1276.761 kb on + strand at 1276.761 kb on + strand at 1276.761 kb on + strand at 1276.762 kb on - strand at 1276.762 kb on - strand at 1276.762 kb on - strand at 1276.762 kb on - strand at 1277.593 kb on + strand at 1277.594 kb on - strand at 1277.594 kb on - strand at 1277.594 kb on - strand at 1277.594 kb on - strand at 1277.635 kb on - strand at 1277.683 kb on + strand at 1277.683 kb on + strand at 1277.684 kb on - strand at 1277.684 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,275,998 - DZA65_RS06170 0.67 +0.5 1,276,033 + DZA65_RS06170 0.69 +0.6 1,276,034 - DZA65_RS06170 0.69 +0.4 1,276,036 + DZA65_RS06170 0.69 -1.2 1,276,036 + DZA65_RS06170 0.69 +0.1 1,276,036 + DZA65_RS06170 0.69 +0.3 1,276,036 + DZA65_RS06170 0.69 +0.1 1,276,037 - DZA65_RS06170 0.69 +0.6 1,276,037 - DZA65_RS06170 0.69 -0.2 1,276,037 - DZA65_RS06170 0.69 +0.8 1,276,037 - DZA65_RS06170 0.69 +0.2 1,276,037 - DZA65_RS06170 0.69 -0.0 1,276,037 - DZA65_RS06170 0.69 +1.3 1,276,037 - DZA65_RS06170 0.69 +0.8 1,276,054 + DZA65_RS06170 0.70 +0.5 1,276,054 + DZA65_RS06170 0.70 -2.6 1,276,055 - DZA65_RS06170 0.70 -0.2 1,276,153 + DZA65_RS06170 0.75 -0.3 1,276,153 + DZA65_RS06170 0.75 +0.1 1,276,154 - DZA65_RS06170 0.75 -0.0 1,276,174 - DZA65_RS06170 0.76 +1.3 1,276,174 - DZA65_RS06170 0.76 -1.6 1,276,439 - +0.6 1,276,439 - +0.2 1,276,560 + +0.3 1,276,604 + +0.9 1,276,605 - +1.6 1,276,622 + -0.1 1,276,622 + -0.0 1,276,622 + +0.4 1,276,622 + +0.3 1,276,710 + -1.8 1,276,710 + -0.2 1,276,710 + +0.4 1,276,711 - +1.5 1,276,711 - -0.4 1,276,711 - -0.3 1,276,711 - -0.2 1,276,711 - -1.2 1,276,758 + +0.3 1,276,761 + -0.5 1,276,761 + -1.9 1,276,761 + -0.9 1,276,762 - -0.3 1,276,762 - +0.9 1,276,762 - +0.1 1,276,762 - +0.6 1,277,593 + -0.3 1,277,594 - -0.4 1,277,594 - +0.1 1,277,594 - -2.8 1,277,594 - -0.5 1,277,635 - +0.6 1,277,683 + +0.4 1,277,683 + -0.5 1,277,684 - -2.3 1,277,684 - +0.4
Or see this region's nucleotide sequence