Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS05495 and DZA65_RS05500 are separated by 138 nucleotides DZA65_RS05500 and DZA65_RS05505 are separated by 3 nucleotides
DZA65_RS05495: DZA65_RS05495 - outer membrane protein assembly factor BamA, at 1,130,224 to 1,132,641
_RS05495
DZA65_RS05500: DZA65_RS05500 - molecular chaperone Skp, at 1,132,780 to 1,133,277
_RS05500
DZA65_RS05505: DZA65_RS05505 - UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase, at 1,133,281 to 1,134,303
_RS05505
Position (kb)
1132
1133
1134 Strain fitness (log2 ratio)
-2
-1
0
1 at 1132.639 kb on + strand at 1132.639 kb on + strand at 1132.643 kb on + strand at 1132.643 kb on + strand at 1132.643 kb on + strand at 1132.643 kb on + strand at 1132.643 kb on + strand at 1132.643 kb on + strand at 1132.677 kb on + strand at 1132.677 kb on + strand at 1132.677 kb on + strand at 1132.677 kb on + strand at 1132.731 kb on + strand at 1132.757 kb on + strand at 1132.757 kb on + strand at 1132.757 kb on + strand at 1132.761 kb on + strand at 1132.761 kb on + strand at 1132.761 kb on + strand at 1132.808 kb on + strand at 1132.962 kb on + strand, within DZA65_RS05500 at 1132.962 kb on + strand, within DZA65_RS05500 at 1133.013 kb on + strand, within DZA65_RS05500 at 1133.013 kb on + strand, within DZA65_RS05500 at 1133.013 kb on + strand, within DZA65_RS05500 at 1133.224 kb on + strand, within DZA65_RS05500 at 1133.224 kb on + strand, within DZA65_RS05500 at 1133.224 kb on + strand, within DZA65_RS05500
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,132,639 + +0.9 1,132,639 + +0.0 1,132,643 + -0.6 1,132,643 + -0.9 1,132,643 + -2.0 1,132,643 + +0.0 1,132,643 + +0.2 1,132,643 + -1.7 1,132,677 + +0.6 1,132,677 + +0.1 1,132,677 + -0.5 1,132,677 + -0.0 1,132,731 + +0.2 1,132,757 + -0.2 1,132,757 + -0.3 1,132,757 + +0.1 1,132,761 + -1.2 1,132,761 + -1.0 1,132,761 + +0.6 1,132,808 + +0.7 1,132,962 + DZA65_RS05500 0.37 -0.6 1,132,962 + DZA65_RS05500 0.37 -0.1 1,133,013 + DZA65_RS05500 0.47 -0.1 1,133,013 + DZA65_RS05500 0.47 -0.3 1,133,013 + DZA65_RS05500 0.47 -1.1 1,133,224 + DZA65_RS05500 0.89 -1.0 1,133,224 + DZA65_RS05500 0.89 -0.7 1,133,224 + DZA65_RS05500 0.89 -0.6
Or see this region's nucleotide sequence