Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS03460 and DZA65_RS03465 are separated by 313 nucleotides DZA65_RS03465 and DZA65_RS03470 overlap by 20 nucleotides DZA65_RS03470 and DZA65_RS03475 are separated by 94 nucleotides
DZA65_RS03460: DZA65_RS03460 - tRNA-modifying protein YgfZ, at 731,705 to 732,685
_RS03460
DZA65_RS03465: DZA65_RS03465 - FAD assembly factor SdhE, at 732,999 to 733,265
_RS03465
DZA65_RS03470: DZA65_RS03470 - membrane protein, at 733,246 to 733,677
_RS03470
DZA65_RS03475: DZA65_RS03475 - flavodoxin FldB, at 733,772 to 734,290
_RS03475
Position (kb) 732
733
734 Strain fitness (log2 ratio) -2
-1
0
1
2 at 732.686 kb on - strand at 732.689 kb on - strand at 732.689 kb on - strand at 732.689 kb on - strand at 732.689 kb on - strand at 732.706 kb on - strand at 732.706 kb on - strand at 732.706 kb on - strand at 732.706 kb on - strand at 732.706 kb on - strand at 732.706 kb on - strand at 732.706 kb on - strand at 732.706 kb on - strand at 732.706 kb on - strand at 732.706 kb on - strand at 732.729 kb on + strand at 732.729 kb on + strand at 732.730 kb on - strand at 732.730 kb on - strand at 732.759 kb on + strand at 732.760 kb on - strand at 732.832 kb on + strand at 732.843 kb on + strand at 732.843 kb on + strand at 732.843 kb on + strand at 732.844 kb on - strand at 732.844 kb on - strand at 732.844 kb on - strand at 732.844 kb on - strand at 732.844 kb on - strand at 732.863 kb on + strand at 732.863 kb on + strand at 732.863 kb on + strand at 732.864 kb on - strand at 732.864 kb on - strand at 732.866 kb on + strand at 732.866 kb on + strand at 732.866 kb on + strand at 732.866 kb on + strand at 732.867 kb on - strand at 732.867 kb on - strand at 732.879 kb on - strand at 732.888 kb on + strand at 732.889 kb on - strand at 732.902 kb on - strand at 732.904 kb on + strand at 732.904 kb on + strand at 732.905 kb on - strand at 732.907 kb on + strand at 732.908 kb on - strand at 732.925 kb on + strand at 732.925 kb on + strand at 732.925 kb on + strand at 732.930 kb on + strand at 732.931 kb on - strand at 732.936 kb on + strand at 732.936 kb on + strand at 732.936 kb on + strand at 732.936 kb on + strand at 732.936 kb on + strand at 732.936 kb on + strand at 732.937 kb on - strand at 732.975 kb on + strand at 732.975 kb on + strand at 732.976 kb on - strand at 733.022 kb on + strand at 733.022 kb on + strand at 733.093 kb on - strand, within DZA65_RS03465 at 733.093 kb on - strand, within DZA65_RS03465 at 733.238 kb on + strand, within DZA65_RS03465 at 733.238 kb on + strand, within DZA65_RS03465 at 733.238 kb on + strand, within DZA65_RS03465 at 733.239 kb on - strand at 733.268 kb on + strand at 733.268 kb on + strand at 733.275 kb on - strand at 733.496 kb on + strand, within DZA65_RS03470 at 733.496 kb on + strand, within DZA65_RS03470 at 733.496 kb on + strand, within DZA65_RS03470 at 733.496 kb on + strand, within DZA65_RS03470 at 733.496 kb on + strand, within DZA65_RS03470 at 733.497 kb on - strand, within DZA65_RS03470 at 733.497 kb on - strand, within DZA65_RS03470 at 733.497 kb on - strand, within DZA65_RS03470 at 733.497 kb on - strand, within DZA65_RS03470 at 733.497 kb on - strand, within DZA65_RS03470 at 733.593 kb on + strand, within DZA65_RS03470 at 733.593 kb on + strand, within DZA65_RS03470 at 733.594 kb on - strand, within DZA65_RS03470 at 733.675 kb on + strand at 733.675 kb on + strand at 733.778 kb on + strand at 733.778 kb on + strand at 733.778 kb on + strand at 733.779 kb on - strand at 733.779 kb on - strand at 733.779 kb on - strand at 733.842 kb on + strand, within DZA65_RS03475 at 733.859 kb on + strand, within DZA65_RS03475 at 733.859 kb on + strand, within DZA65_RS03475 at 733.859 kb on + strand, within DZA65_RS03475 at 733.860 kb on - strand, within DZA65_RS03475 at 733.878 kb on + strand, within DZA65_RS03475 at 733.878 kb on + strand, within DZA65_RS03475 at 733.878 kb on + strand, within DZA65_RS03475 at 733.878 kb on + strand, within DZA65_RS03475 at 733.878 kb on + strand, within DZA65_RS03475 at 733.878 kb on + strand, within DZA65_RS03475 at 733.879 kb on - strand, within DZA65_RS03475 at 733.879 kb on - strand, within DZA65_RS03475 at 733.879 kb on - strand, within DZA65_RS03475 at 733.882 kb on + strand at 733.882 kb on + strand, within DZA65_RS03475 at 733.883 kb on - strand, within DZA65_RS03475 at 733.883 kb on - strand, within DZA65_RS03475 at 733.920 kb on + strand, within DZA65_RS03475 at 733.945 kb on + strand, within DZA65_RS03475 at 734.038 kb on - strand, within DZA65_RS03475 at 734.155 kb on - strand, within DZA65_RS03475 at 734.202 kb on - strand, within DZA65_RS03475 at 734.253 kb on + strand at 734.253 kb on + strand at 734.254 kb on - strand at 734.254 kb on - strand at 734.254 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 732,686 - -0.5 732,689 - +0.1 732,689 - -1.4 732,689 - -1.5 732,689 - +0.1 732,706 - -0.1 732,706 - +0.4 732,706 - +0.6 732,706 - +0.3 732,706 - -1.8 732,706 - +1.4 732,706 - -0.3 732,706 - +0.6 732,706 - +1.2 732,706 - -0.8 732,729 + +1.0 732,729 + +0.3 732,730 - -1.1 732,730 - +1.5 732,759 + +0.1 732,760 - +0.2 732,832 + +2.1 732,843 + -0.0 732,843 + +1.3 732,843 + +0.7 732,844 - -0.1 732,844 - -1.0 732,844 - +0.6 732,844 - -1.2 732,844 - -0.0 732,863 + -0.5 732,863 + +0.6 732,863 + -0.1 732,864 - +0.2 732,864 - -1.1 732,866 + +0.0 732,866 + -0.3 732,866 + -0.6 732,866 + +0.4 732,867 - +0.5 732,867 - -0.3 732,879 - +1.0 732,888 + +0.2 732,889 - +0.9 732,902 - -0.2 732,904 + +0.5 732,904 + +0.2 732,905 - +0.6 732,907 + -0.8 732,908 - +0.3 732,925 + +0.3 732,925 + +0.4 732,925 + -0.3 732,930 + +0.7 732,931 - -1.3 732,936 + -1.4 732,936 + -0.0 732,936 + +0.2 732,936 + +1.0 732,936 + +0.8 732,936 + -1.8 732,937 - -0.4 732,975 + +0.1 732,975 + +0.8 732,976 - -0.3 733,022 + -1.5 733,022 + +0.1 733,093 - DZA65_RS03465 0.35 -1.0 733,093 - DZA65_RS03465 0.35 -2.3 733,238 + DZA65_RS03465 0.90 -1.8 733,238 + DZA65_RS03465 0.90 -0.8 733,238 + DZA65_RS03465 0.90 -1.2 733,239 - +0.8 733,268 + +0.7 733,268 + -1.8 733,275 - -0.7 733,496 + DZA65_RS03470 0.58 -0.9 733,496 + DZA65_RS03470 0.58 +0.5 733,496 + DZA65_RS03470 0.58 +0.6 733,496 + DZA65_RS03470 0.58 -0.7 733,496 + DZA65_RS03470 0.58 +0.2 733,497 - DZA65_RS03470 0.58 -1.2 733,497 - DZA65_RS03470 0.58 +0.7 733,497 - DZA65_RS03470 0.58 -0.9 733,497 - DZA65_RS03470 0.58 -1.5 733,497 - DZA65_RS03470 0.58 -1.7 733,593 + DZA65_RS03470 0.80 +0.2 733,593 + DZA65_RS03470 0.80 +0.6 733,594 - DZA65_RS03470 0.81 -0.3 733,675 + -0.5 733,675 + +1.5 733,778 + +1.0 733,778 + +0.7 733,778 + -0.2 733,779 - -0.1 733,779 - -0.5 733,779 - +1.7 733,842 + DZA65_RS03475 0.13 +0.9 733,859 + DZA65_RS03475 0.17 +0.3 733,859 + DZA65_RS03475 0.17 +1.5 733,859 + DZA65_RS03475 0.17 -0.5 733,860 - DZA65_RS03475 0.17 +0.9 733,878 + DZA65_RS03475 0.20 +0.1 733,878 + DZA65_RS03475 0.20 +0.2 733,878 + DZA65_RS03475 0.20 +2.1 733,878 + DZA65_RS03475 0.20 -0.4 733,878 + DZA65_RS03475 0.20 -1.6 733,878 + DZA65_RS03475 0.20 -0.1 733,879 - DZA65_RS03475 0.21 -1.1 733,879 - DZA65_RS03475 0.21 -0.9 733,879 - DZA65_RS03475 0.21 -0.2 733,882 + +0.5 733,882 + DZA65_RS03475 0.21 +0.2 733,883 - DZA65_RS03475 0.21 +0.5 733,883 - DZA65_RS03475 0.21 -0.9 733,920 + DZA65_RS03475 0.29 -0.0 733,945 + DZA65_RS03475 0.33 -0.6 734,038 - DZA65_RS03475 0.51 -0.4 734,155 - DZA65_RS03475 0.74 -1.8 734,202 - DZA65_RS03475 0.83 -0.1 734,253 + -0.4 734,253 + -1.3 734,254 - +0.1 734,254 - +1.1 734,254 - -1.2
Or see this region's nucleotide sequence