Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS02455 and DZA65_RS02460 are separated by 39 nucleotides DZA65_RS02460 and DZA65_RS02465 are separated by 234 nucleotides DZA65_RS02465 and DZA65_RS02475 are separated by 338 nucleotides DZA65_RS02475 and DZA65_RS02480 are separated by 13 nucleotides
DZA65_RS02455: DZA65_RS02455 - Xaa-Pro aminopeptidase, at 529,486 to 530,814
_RS02455
DZA65_RS02460: DZA65_RS02460 - YecA family protein, at 530,854 to 531,438
_RS02460
DZA65_RS02465: DZA65_RS02465 - cell division protein ZapA, at 531,673 to 532,002
_RS02465
DZA65_RS02475: DZA65_RS02475 - 5-formyltetrahydrofolate cyclo-ligase, at 532,341 to 532,955
_RS02475
DZA65_RS02480: DZA65_RS02480 - multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR, at 532,969 to 534,225
_RS02480
Position (kb) 531
532
533 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 530.700 kb on - strand at 530.716 kb on - strand at 530.716 kb on - strand at 530.799 kb on - strand at 530.799 kb on - strand at 530.799 kb on - strand at 530.799 kb on - strand at 530.816 kb on - strand at 530.855 kb on + strand at 530.856 kb on - strand at 530.856 kb on - strand at 530.938 kb on + strand, within DZA65_RS02460 at 530.938 kb on + strand, within DZA65_RS02460 at 530.939 kb on - strand, within DZA65_RS02460 at 530.939 kb on - strand, within DZA65_RS02460 at 530.939 kb on - strand, within DZA65_RS02460 at 530.939 kb on - strand, within DZA65_RS02460 at 530.942 kb on + strand, within DZA65_RS02460 at 530.942 kb on + strand, within DZA65_RS02460 at 530.942 kb on + strand, within DZA65_RS02460 at 530.942 kb on + strand, within DZA65_RS02460 at 530.942 kb on + strand, within DZA65_RS02460 at 530.943 kb on - strand, within DZA65_RS02460 at 530.943 kb on - strand, within DZA65_RS02460 at 530.943 kb on - strand, within DZA65_RS02460 at 530.943 kb on - strand, within DZA65_RS02460 at 530.943 kb on - strand, within DZA65_RS02460 at 530.943 kb on - strand, within DZA65_RS02460 at 530.943 kb on - strand, within DZA65_RS02460 at 531.022 kb on + strand, within DZA65_RS02460 at 531.022 kb on + strand, within DZA65_RS02460 at 531.022 kb on + strand, within DZA65_RS02460 at 531.023 kb on - strand, within DZA65_RS02460 at 531.023 kb on - strand, within DZA65_RS02460 at 531.023 kb on - strand at 531.023 kb on - strand, within DZA65_RS02460 at 531.023 kb on - strand, within DZA65_RS02460 at 531.225 kb on - strand, within DZA65_RS02460 at 531.225 kb on - strand, within DZA65_RS02460 at 531.225 kb on - strand, within DZA65_RS02460 at 531.225 kb on - strand, within DZA65_RS02460 at 531.331 kb on + strand, within DZA65_RS02460 at 531.331 kb on + strand, within DZA65_RS02460 at 531.332 kb on - strand, within DZA65_RS02460 at 531.332 kb on - strand, within DZA65_RS02460 at 531.392 kb on - strand at 531.392 kb on - strand at 531.423 kb on + strand at 531.423 kb on + strand at 531.423 kb on + strand at 531.423 kb on + strand at 531.423 kb on + strand at 531.424 kb on - strand at 531.424 kb on - strand at 531.430 kb on + strand at 531.431 kb on - strand at 531.431 kb on - strand at 531.432 kb on + strand at 531.432 kb on + strand at 531.433 kb on - strand at 531.433 kb on - strand at 531.433 kb on - strand at 531.433 kb on - strand at 531.473 kb on - strand at 531.473 kb on - strand at 531.473 kb on - strand at 531.478 kb on - strand at 531.478 kb on - strand at 531.496 kb on + strand at 531.497 kb on - strand at 531.499 kb on - strand at 531.536 kb on + strand at 531.536 kb on + strand at 531.536 kb on + strand at 531.536 kb on + strand at 531.536 kb on + strand at 531.536 kb on + strand at 531.536 kb on + strand at 531.536 kb on + strand at 531.536 kb on + strand at 531.536 kb on + strand at 531.537 kb on - strand at 531.537 kb on - strand at 531.537 kb on - strand at 531.537 kb on - strand at 531.537 kb on - strand at 531.537 kb on - strand at 531.537 kb on - strand at 531.537 kb on - strand at 531.543 kb on + strand at 531.543 kb on + strand at 531.544 kb on - strand at 531.544 kb on - strand at 531.544 kb on - strand at 531.544 kb on - strand at 531.544 kb on - strand at 531.546 kb on + strand at 531.546 kb on + strand at 531.546 kb on + strand at 531.547 kb on - strand at 531.547 kb on - strand at 531.547 kb on - strand at 531.547 kb on - strand at 531.552 kb on + strand at 531.552 kb on + strand at 531.552 kb on + strand at 531.552 kb on + strand at 531.553 kb on - strand at 531.553 kb on - strand at 531.553 kb on - strand at 531.553 kb on - strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.555 kb on - strand at 531.555 kb on - strand at 531.555 kb on - strand at 531.555 kb on - strand at 531.555 kb on - strand at 531.555 kb on - strand at 531.555 kb on - strand at 531.555 kb on - strand at 531.555 kb on - strand at 531.555 kb on - strand at 531.555 kb on - strand at 531.555 kb on - strand at 531.555 kb on - strand at 531.555 kb on - strand at 531.568 kb on + strand at 531.568 kb on + strand at 531.579 kb on + strand at 531.579 kb on + strand at 531.579 kb on + strand at 531.579 kb on + strand at 531.580 kb on - strand at 531.580 kb on - strand at 531.581 kb on + strand at 531.581 kb on + strand at 531.581 kb on + strand at 531.581 kb on + strand at 531.581 kb on + strand at 531.581 kb on + strand at 531.581 kb on + strand at 531.581 kb on + strand at 531.581 kb on + strand at 531.581 kb on + strand at 531.581 kb on + strand at 531.583 kb on + strand at 531.583 kb on + strand at 531.583 kb on + strand at 531.583 kb on + strand at 531.774 kb on + strand, within DZA65_RS02465 at 531.969 kb on + strand, within DZA65_RS02465 at 531.969 kb on + strand, within DZA65_RS02465 at 531.969 kb on + strand, within DZA65_RS02465 at 531.970 kb on - strand at 531.970 kb on - strand at 531.973 kb on - strand at 532.001 kb on - strand at 532.001 kb on - strand at 532.024 kb on + strand at 532.025 kb on - strand at 532.025 kb on - strand at 532.062 kb on + strand at 532.062 kb on + strand at 532.062 kb on + strand at 532.062 kb on + strand at 532.063 kb on - strand at 532.063 kb on - strand at 532.063 kb on - strand at 532.063 kb on - strand at 532.063 kb on - strand at 532.063 kb on - strand at 532.063 kb on - strand at 532.063 kb on - strand at 532.128 kb on + strand at 532.129 kb on - strand at 532.148 kb on - strand at 532.157 kb on + strand at 532.158 kb on - strand at 532.194 kb on - strand at 532.239 kb on - strand at 532.239 kb on - strand at 532.277 kb on + strand at 532.297 kb on + strand at 532.297 kb on + strand at 532.297 kb on + strand at 532.297 kb on + strand at 532.297 kb on + strand at 532.310 kb on + strand at 532.311 kb on - strand at 532.311 kb on - strand at 532.311 kb on - strand at 532.319 kb on - strand at 532.387 kb on + strand at 532.388 kb on - strand at 532.596 kb on + strand, within DZA65_RS02475 at 532.596 kb on + strand, within DZA65_RS02475 at 532.596 kb on + strand, within DZA65_RS02475 at 532.642 kb on + strand, within DZA65_RS02475 at 532.642 kb on + strand, within DZA65_RS02475 at 532.642 kb on + strand, within DZA65_RS02475 at 532.643 kb on - strand, within DZA65_RS02475 at 532.807 kb on - strand, within DZA65_RS02475 at 532.807 kb on - strand, within DZA65_RS02475 at 532.958 kb on + strand at 532.958 kb on + strand at 532.971 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 530,700 - -0.3 530,716 - +0.5 530,716 - -1.6 530,799 - -2.3 530,799 - -1.0 530,799 - -1.7 530,799 - +0.7 530,816 - +0.0 530,855 + -1.5 530,856 - +0.7 530,856 - +0.7 530,938 + DZA65_RS02460 0.14 -0.4 530,938 + DZA65_RS02460 0.14 -0.3 530,939 - DZA65_RS02460 0.15 -2.3 530,939 - DZA65_RS02460 0.15 -0.5 530,939 - DZA65_RS02460 0.15 +0.1 530,939 - DZA65_RS02460 0.15 -0.7 530,942 + DZA65_RS02460 0.15 +0.2 530,942 + DZA65_RS02460 0.15 -0.2 530,942 + DZA65_RS02460 0.15 -1.0 530,942 + DZA65_RS02460 0.15 -0.2 530,942 + DZA65_RS02460 0.15 -1.4 530,943 - DZA65_RS02460 0.15 -0.1 530,943 - DZA65_RS02460 0.15 -0.9 530,943 - DZA65_RS02460 0.15 -1.4 530,943 - DZA65_RS02460 0.15 -1.7 530,943 - DZA65_RS02460 0.15 +0.2 530,943 - DZA65_RS02460 0.15 +1.0 530,943 - DZA65_RS02460 0.15 -0.4 531,022 + DZA65_RS02460 0.29 +0.2 531,022 + DZA65_RS02460 0.29 -0.7 531,022 + DZA65_RS02460 0.29 +0.2 531,023 - DZA65_RS02460 0.29 -1.4 531,023 - DZA65_RS02460 0.29 -0.9 531,023 - +2.5 531,023 - DZA65_RS02460 0.29 -0.3 531,023 - DZA65_RS02460 0.29 -0.3 531,225 - DZA65_RS02460 0.63 -0.4 531,225 - DZA65_RS02460 0.63 +0.7 531,225 - DZA65_RS02460 0.63 -1.0 531,225 - DZA65_RS02460 0.63 +0.0 531,331 + DZA65_RS02460 0.82 -1.2 531,331 + DZA65_RS02460 0.82 -1.1 531,332 - DZA65_RS02460 0.82 -1.5 531,332 - DZA65_RS02460 0.82 +1.1 531,392 - +0.8 531,392 - -0.2 531,423 + -1.0 531,423 + -2.3 531,423 + -0.2 531,423 + -1.5 531,423 + -2.1 531,424 - -0.9 531,424 - +0.9 531,430 + -0.1 531,431 - +0.3 531,431 - -0.1 531,432 + -1.0 531,432 + -1.8 531,433 - +0.1 531,433 - -1.1 531,433 - -0.0 531,433 - +1.7 531,473 - +0.2 531,473 - -0.5 531,473 - -0.2 531,478 - +1.1 531,478 - +1.0 531,496 + -1.3 531,497 - +2.2 531,499 - +1.6 531,536 + +1.2 531,536 + +0.5 531,536 + -0.9 531,536 + -2.7 531,536 + +0.2 531,536 + +0.8 531,536 + +0.5 531,536 + +0.1 531,536 + -0.5 531,536 + -0.6 531,537 - +1.3 531,537 - +1.6 531,537 - +0.7 531,537 - +0.5 531,537 - +0.7 531,537 - -0.2 531,537 - +0.5 531,537 - -0.3 531,543 + -0.0 531,543 + -0.5 531,544 - +0.8 531,544 - +0.4 531,544 - +0.3 531,544 - -1.3 531,544 - +4.0 531,546 + +0.2 531,546 + +1.3 531,546 + -0.1 531,547 - -0.1 531,547 - +1.2 531,547 - +1.1 531,547 - +1.0 531,552 + -0.5 531,552 + -0.3 531,552 + -0.3 531,552 + -1.1 531,553 - -2.3 531,553 - -0.2 531,553 - -0.6 531,553 - -0.4 531,554 + -1.1 531,554 + -1.1 531,554 + +0.0 531,554 + -0.2 531,554 + +0.5 531,554 + +0.7 531,554 + -0.7 531,554 + -1.2 531,554 + +1.4 531,554 + +0.5 531,554 + +0.1 531,554 + -0.1 531,554 + -0.6 531,554 + -0.9 531,554 + -0.3 531,555 - -0.3 531,555 - +0.1 531,555 - -0.5 531,555 - +0.1 531,555 - -1.5 531,555 - +1.5 531,555 - -0.6 531,555 - -0.0 531,555 - +0.2 531,555 - -0.2 531,555 - -0.4 531,555 - -1.0 531,555 - -0.1 531,555 - -0.6 531,568 + -0.7 531,568 + +0.0 531,579 + -0.1 531,579 + -0.9 531,579 + -0.1 531,579 + -1.1 531,580 - -2.3 531,580 - +1.1 531,581 + -2.3 531,581 + -0.5 531,581 + +0.0 531,581 + -1.3 531,581 + +1.0 531,581 + -2.5 531,581 + -0.5 531,581 + -3.2 531,581 + -2.3 531,581 + -2.1 531,581 + -0.3 531,583 + +0.3 531,583 + -2.8 531,583 + +1.0 531,583 + +0.7 531,774 + DZA65_RS02465 0.31 +1.2 531,969 + DZA65_RS02465 0.90 +0.9 531,969 + DZA65_RS02465 0.90 -0.8 531,969 + DZA65_RS02465 0.90 -0.2 531,970 - -0.5 531,970 - -0.4 531,973 - -2.1 532,001 - +0.5 532,001 - -0.7 532,024 + -0.5 532,025 - -2.1 532,025 - +0.0 532,062 + +0.7 532,062 + -0.7 532,062 + +0.4 532,062 + +0.6 532,063 - -0.9 532,063 - +0.0 532,063 - +0.3 532,063 - +0.6 532,063 - -1.1 532,063 - -1.6 532,063 - +0.6 532,063 - -0.2 532,128 + +0.6 532,129 - +0.7 532,148 - -0.1 532,157 + -0.3 532,158 - +0.1 532,194 - +1.5 532,239 - +0.2 532,239 - +0.5 532,277 + -0.6 532,297 + +0.5 532,297 + -0.2 532,297 + -0.4 532,297 + -0.4 532,297 + -0.9 532,310 + -0.1 532,311 - -1.1 532,311 - -0.4 532,311 - -0.9 532,319 - +1.2 532,387 + +0.1 532,388 - -0.2 532,596 + DZA65_RS02475 0.41 +1.1 532,596 + DZA65_RS02475 0.41 +0.1 532,596 + DZA65_RS02475 0.41 -1.8 532,642 + DZA65_RS02475 0.49 +0.2 532,642 + DZA65_RS02475 0.49 +0.5 532,642 + DZA65_RS02475 0.49 +0.6 532,643 - DZA65_RS02475 0.49 +0.9 532,807 - DZA65_RS02475 0.76 -0.1 532,807 - DZA65_RS02475 0.76 +0.4 532,958 + +0.5 532,958 + -0.5 532,971 - +0.3
Or see this region's nucleotide sequence