Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS02130 and DZA65_RS02135 overlap by 17 nucleotides DZA65_RS02135 and DZA65_RS02140 are separated by 286 nucleotides
DZA65_RS02130: DZA65_RS02130 - type II toxin-antitoxin system RelE/ParE family toxin, at 468,747 to 469,098
_RS02130
DZA65_RS02135: DZA65_RS02135 - DNA-binding transcriptional regulator, at 469,082 to 469,405
_RS02135
DZA65_RS02140: DZA65_RS02140 - RNA-directed DNA polymerase, at 469,692 to 471,419
_RS02140
Position (kb) 469
470
471
472 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 468.701 kb on + strand at 468.706 kb on + strand at 468.707 kb on - strand at 468.722 kb on - strand at 468.725 kb on + strand at 468.774 kb on - strand at 468.776 kb on + strand at 468.776 kb on + strand at 468.814 kb on + strand, within DZA65_RS02130 at 468.814 kb on + strand, within DZA65_RS02130 at 468.814 kb on + strand, within DZA65_RS02130 at 468.814 kb on + strand, within DZA65_RS02130 at 468.814 kb on + strand, within DZA65_RS02130 at 468.814 kb on + strand, within DZA65_RS02130 at 468.814 kb on + strand, within DZA65_RS02130 at 468.814 kb on + strand, within DZA65_RS02130 at 468.814 kb on + strand, within DZA65_RS02130 at 468.815 kb on - strand, within DZA65_RS02130 at 468.815 kb on - strand, within DZA65_RS02130 at 468.815 kb on - strand, within DZA65_RS02130 at 468.815 kb on - strand, within DZA65_RS02130 at 468.815 kb on - strand, within DZA65_RS02130 at 468.815 kb on - strand, within DZA65_RS02130 at 468.815 kb on - strand, within DZA65_RS02130 at 468.815 kb on - strand, within DZA65_RS02130 at 468.815 kb on - strand, within DZA65_RS02130 at 468.913 kb on + strand, within DZA65_RS02130 at 468.913 kb on + strand, within DZA65_RS02130 at 468.913 kb on + strand, within DZA65_RS02130 at 468.913 kb on + strand, within DZA65_RS02130 at 468.914 kb on - strand, within DZA65_RS02130 at 468.914 kb on - strand, within DZA65_RS02130 at 468.914 kb on - strand, within DZA65_RS02130 at 468.914 kb on - strand, within DZA65_RS02130 at 468.914 kb on - strand, within DZA65_RS02130 at 468.942 kb on + strand, within DZA65_RS02130 at 468.954 kb on + strand, within DZA65_RS02130 at 468.954 kb on + strand, within DZA65_RS02130 at 468.955 kb on - strand, within DZA65_RS02130 at 468.955 kb on - strand, within DZA65_RS02130 at 468.955 kb on - strand, within DZA65_RS02130 at 469.020 kb on + strand, within DZA65_RS02130 at 469.020 kb on + strand, within DZA65_RS02130 at 469.020 kb on + strand, within DZA65_RS02130 at 469.020 kb on + strand, within DZA65_RS02130 at 469.021 kb on - strand, within DZA65_RS02130 at 469.021 kb on - strand, within DZA65_RS02130 at 469.021 kb on - strand, within DZA65_RS02130 at 469.042 kb on - strand, within DZA65_RS02130 at 469.042 kb on - strand, within DZA65_RS02130 at 469.042 kb on - strand, within DZA65_RS02130 at 469.053 kb on + strand, within DZA65_RS02130 at 469.053 kb on + strand, within DZA65_RS02130 at 469.059 kb on + strand at 469.060 kb on - strand, within DZA65_RS02130 at 469.204 kb on + strand, within DZA65_RS02135 at 469.205 kb on - strand, within DZA65_RS02135 at 469.237 kb on + strand, within DZA65_RS02135 at 469.237 kb on + strand, within DZA65_RS02135 at 469.257 kb on + strand, within DZA65_RS02135 at 469.257 kb on + strand, within DZA65_RS02135 at 469.257 kb on + strand, within DZA65_RS02135 at 469.257 kb on + strand, within DZA65_RS02135 at 469.258 kb on - strand, within DZA65_RS02135 at 469.414 kb on + strand at 469.414 kb on + strand at 469.414 kb on + strand at 469.414 kb on + strand at 469.415 kb on - strand at 469.415 kb on - strand at 469.415 kb on - strand at 469.415 kb on - strand at 469.415 kb on - strand at 469.415 kb on - strand at 469.415 kb on - strand at 469.422 kb on + strand at 469.423 kb on - strand at 469.423 kb on - strand at 469.423 kb on - strand at 469.423 kb on - strand at 469.462 kb on + strand at 469.463 kb on - strand at 469.463 kb on - strand at 469.479 kb on + strand at 469.509 kb on + strand at 469.509 kb on + strand at 469.509 kb on + strand at 469.510 kb on - strand at 469.510 kb on - strand at 469.510 kb on - strand at 469.510 kb on - strand at 469.510 kb on - strand at 469.510 kb on - strand at 469.516 kb on + strand at 469.517 kb on - strand at 469.517 kb on - strand at 469.556 kb on + strand at 469.556 kb on + strand at 469.556 kb on + strand at 469.556 kb on + strand at 469.556 kb on + strand at 469.556 kb on + strand at 469.556 kb on + strand at 469.557 kb on - strand at 469.557 kb on - strand at 469.616 kb on + strand at 469.617 kb on - strand at 469.617 kb on - strand at 469.621 kb on + strand at 469.682 kb on - strand at 469.712 kb on + strand at 469.713 kb on - strand at 469.830 kb on - strand at 469.919 kb on + strand, within DZA65_RS02140 at 469.919 kb on + strand, within DZA65_RS02140 at 469.920 kb on - strand, within DZA65_RS02140 at 469.950 kb on + strand, within DZA65_RS02140 at 469.952 kb on + strand, within DZA65_RS02140 at 470.006 kb on + strand, within DZA65_RS02140 at 470.006 kb on + strand, within DZA65_RS02140 at 470.007 kb on - strand, within DZA65_RS02140 at 470.007 kb on - strand, within DZA65_RS02140 at 470.240 kb on - strand, within DZA65_RS02140 at 470.326 kb on + strand, within DZA65_RS02140 at 470.334 kb on - strand, within DZA65_RS02140 at 470.409 kb on + strand, within DZA65_RS02140 at 470.464 kb on + strand, within DZA65_RS02140 at 470.464 kb on + strand, within DZA65_RS02140 at 470.547 kb on + strand, within DZA65_RS02140 at 470.580 kb on - strand, within DZA65_RS02140 at 470.626 kb on - strand, within DZA65_RS02140 at 470.818 kb on - strand, within DZA65_RS02140 at 470.819 kb on + strand, within DZA65_RS02140 at 470.820 kb on - strand, within DZA65_RS02140 at 470.843 kb on + strand, within DZA65_RS02140 at 470.898 kb on + strand, within DZA65_RS02140 at 470.971 kb on - strand, within DZA65_RS02140 at 471.070 kb on - strand, within DZA65_RS02140 at 471.114 kb on - strand, within DZA65_RS02140 at 471.223 kb on - strand, within DZA65_RS02140 at 471.319 kb on - strand at 471.323 kb on - strand at 471.324 kb on + strand at 471.386 kb on + strand at 471.387 kb on - strand at 471.464 kb on + strand at 471.465 kb on - strand at 471.465 kb on - strand at 471.469 kb on + strand at 471.489 kb on - strand at 471.499 kb on + strand at 471.499 kb on + strand at 471.499 kb on + strand at 471.500 kb on - strand at 471.578 kb on - strand at 471.666 kb on + strand at 471.666 kb on + strand at 471.666 kb on + strand at 471.667 kb on - strand at 471.726 kb on + strand at 471.726 kb on + strand at 471.726 kb on + strand at 471.727 kb on - strand at 471.727 kb on - strand at 471.727 kb on - strand at 471.735 kb on + strand at 471.736 kb on - strand at 471.736 kb on - strand at 471.815 kb on + strand at 471.815 kb on + strand at 471.815 kb on + strand at 471.815 kb on + strand at 471.815 kb on + strand at 471.815 kb on + strand at 471.815 kb on + strand at 471.815 kb on + strand at 471.816 kb on - strand at 471.816 kb on - strand at 471.822 kb on + strand at 471.892 kb on + strand at 471.892 kb on + strand at 471.892 kb on + strand at 471.892 kb on + strand at 471.892 kb on + strand at 471.892 kb on + strand at 471.893 kb on - strand at 471.893 kb on - strand at 471.896 kb on + strand at 471.896 kb on + strand at 471.897 kb on - strand at 471.917 kb on + strand at 471.917 kb on + strand at 471.917 kb on + strand at 471.917 kb on + strand at 471.917 kb on + strand at 471.918 kb on - strand at 471.920 kb on + strand at 471.936 kb on + strand at 471.937 kb on - strand at 471.937 kb on - strand at 471.937 kb on - strand at 471.941 kb on + strand at 471.941 kb on + strand at 471.941 kb on + strand at 471.941 kb on + strand at 471.941 kb on + strand at 471.941 kb on + strand at 471.942 kb on - strand at 471.942 kb on - strand at 471.942 kb on - strand at 471.971 kb on + strand at 471.971 kb on + strand at 471.972 kb on - strand at 471.989 kb on - strand at 471.989 kb on - strand at 472.035 kb on + strand at 472.036 kb on - strand at 472.036 kb on - strand at 472.037 kb on + strand at 472.037 kb on + strand at 472.037 kb on + strand at 472.038 kb on - strand at 472.038 kb on - strand at 472.318 kb on + strand at 472.318 kb on + strand at 472.347 kb on + strand at 472.347 kb on + strand at 472.347 kb on + strand at 472.347 kb on + strand at 472.347 kb on + strand at 472.347 kb on + strand at 472.347 kb on + strand at 472.347 kb on + strand at 472.347 kb on + strand at 472.347 kb on + strand at 472.347 kb on + strand at 472.348 kb on - strand at 472.348 kb on - strand at 472.348 kb on - strand at 472.348 kb on - strand at 472.348 kb on - strand at 472.348 kb on - strand at 472.348 kb on - strand at 472.348 kb on - strand at 472.348 kb on - strand at 472.348 kb on - strand at 472.348 kb on - strand at 472.412 kb on + strand at 472.412 kb on + strand at 472.412 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 468,701 + +0.8 468,706 + -0.8 468,707 - -0.1 468,722 - +0.5 468,725 + +0.0 468,774 - +0.2 468,776 + +0.0 468,776 + -0.3 468,814 + DZA65_RS02130 0.19 +1.9 468,814 + DZA65_RS02130 0.19 +0.6 468,814 + DZA65_RS02130 0.19 -1.3 468,814 + DZA65_RS02130 0.19 +0.3 468,814 + DZA65_RS02130 0.19 +0.3 468,814 + DZA65_RS02130 0.19 -0.2 468,814 + DZA65_RS02130 0.19 -0.5 468,814 + DZA65_RS02130 0.19 -0.5 468,814 + DZA65_RS02130 0.19 -0.5 468,815 - DZA65_RS02130 0.19 -0.9 468,815 - DZA65_RS02130 0.19 -0.5 468,815 - DZA65_RS02130 0.19 -2.5 468,815 - DZA65_RS02130 0.19 -0.6 468,815 - DZA65_RS02130 0.19 -0.5 468,815 - DZA65_RS02130 0.19 -0.1 468,815 - DZA65_RS02130 0.19 -0.2 468,815 - DZA65_RS02130 0.19 -0.1 468,815 - DZA65_RS02130 0.19 -0.2 468,913 + DZA65_RS02130 0.47 -0.1 468,913 + DZA65_RS02130 0.47 +0.0 468,913 + DZA65_RS02130 0.47 +1.2 468,913 + DZA65_RS02130 0.47 -0.3 468,914 - DZA65_RS02130 0.47 +0.2 468,914 - DZA65_RS02130 0.47 +0.1 468,914 - DZA65_RS02130 0.47 -0.3 468,914 - DZA65_RS02130 0.47 -0.3 468,914 - DZA65_RS02130 0.47 -0.1 468,942 + DZA65_RS02130 0.55 -1.1 468,954 + DZA65_RS02130 0.59 +0.2 468,954 + DZA65_RS02130 0.59 +0.7 468,955 - DZA65_RS02130 0.59 +0.0 468,955 - DZA65_RS02130 0.59 +0.5 468,955 - DZA65_RS02130 0.59 -0.1 469,020 + DZA65_RS02130 0.78 +0.8 469,020 + DZA65_RS02130 0.78 -2.5 469,020 + DZA65_RS02130 0.78 -0.8 469,020 + DZA65_RS02130 0.78 +0.5 469,021 - DZA65_RS02130 0.78 -1.1 469,021 - DZA65_RS02130 0.78 -0.9 469,021 - DZA65_RS02130 0.78 +0.3 469,042 - DZA65_RS02130 0.84 -0.6 469,042 - DZA65_RS02130 0.84 -1.1 469,042 - DZA65_RS02130 0.84 -1.0 469,053 + DZA65_RS02130 0.87 +0.5 469,053 + DZA65_RS02130 0.87 -0.1 469,059 + +0.5 469,060 - DZA65_RS02130 0.89 +0.0 469,204 + DZA65_RS02135 0.38 -0.2 469,205 - DZA65_RS02135 0.38 +0.2 469,237 + DZA65_RS02135 0.48 -1.1 469,237 + DZA65_RS02135 0.48 -0.3 469,257 + DZA65_RS02135 0.54 +0.3 469,257 + DZA65_RS02135 0.54 +0.1 469,257 + DZA65_RS02135 0.54 -0.5 469,257 + DZA65_RS02135 0.54 -2.8 469,258 - DZA65_RS02135 0.54 -0.8 469,414 + +1.9 469,414 + -0.7 469,414 + +0.8 469,414 + -0.1 469,415 - +0.5 469,415 - +0.1 469,415 - +1.3 469,415 - -0.7 469,415 - +0.3 469,415 - +0.4 469,415 - +0.0 469,422 + -1.1 469,423 - +0.1 469,423 - -0.5 469,423 - -0.4 469,423 - -0.2 469,462 + -1.1 469,463 - -1.6 469,463 - +0.7 469,479 + -0.3 469,509 + +0.8 469,509 + -0.1 469,509 + -0.7 469,510 - +2.1 469,510 - -0.6 469,510 - -1.2 469,510 - -0.6 469,510 - +1.7 469,510 - -0.4 469,516 + -0.1 469,517 - -0.0 469,517 - +0.8 469,556 + +1.0 469,556 + +0.7 469,556 + -0.2 469,556 + -0.2 469,556 + -0.3 469,556 + -1.1 469,556 + +0.4 469,557 - -1.7 469,557 - -1.7 469,616 + -1.0 469,617 - +0.7 469,617 - +0.1 469,621 + -0.1 469,682 - -1.2 469,712 + -0.3 469,713 - +0.1 469,830 - -0.0 469,919 + DZA65_RS02140 0.13 -1.3 469,919 + DZA65_RS02140 0.13 -0.5 469,920 - DZA65_RS02140 0.13 +0.3 469,950 + DZA65_RS02140 0.15 +0.3 469,952 + DZA65_RS02140 0.15 -0.2 470,006 + DZA65_RS02140 0.18 -0.7 470,006 + DZA65_RS02140 0.18 -0.3 470,007 - DZA65_RS02140 0.18 -0.5 470,007 - DZA65_RS02140 0.18 +0.1 470,240 - DZA65_RS02140 0.32 -0.9 470,326 + DZA65_RS02140 0.37 -1.3 470,334 - DZA65_RS02140 0.37 -0.4 470,409 + DZA65_RS02140 0.41 +0.9 470,464 + DZA65_RS02140 0.45 -0.9 470,464 + DZA65_RS02140 0.45 +0.2 470,547 + DZA65_RS02140 0.49 +0.5 470,580 - DZA65_RS02140 0.51 -0.7 470,626 - DZA65_RS02140 0.54 +1.0 470,818 - DZA65_RS02140 0.65 +0.1 470,819 + DZA65_RS02140 0.65 -2.0 470,820 - DZA65_RS02140 0.65 -0.9 470,843 + DZA65_RS02140 0.67 -1.1 470,898 + DZA65_RS02140 0.70 +0.9 470,971 - DZA65_RS02140 0.74 +0.4 471,070 - DZA65_RS02140 0.80 -0.5 471,114 - DZA65_RS02140 0.82 -0.2 471,223 - DZA65_RS02140 0.89 -0.3 471,319 - +0.9 471,323 - -0.4 471,324 + -0.5 471,386 + +1.4 471,387 - +1.7 471,464 + -0.1 471,465 - +0.7 471,465 - -0.7 471,469 + +1.5 471,489 - -0.7 471,499 + +0.1 471,499 + +0.6 471,499 + -0.6 471,500 - -0.6 471,578 - -0.3 471,666 + +3.3 471,666 + -0.5 471,666 + +2.3 471,667 - +1.0 471,726 + +0.5 471,726 + -0.2 471,726 + -1.1 471,727 - -0.7 471,727 - +0.4 471,727 - +0.3 471,735 + -0.1 471,736 - +0.3 471,736 - +0.0 471,815 + -2.5 471,815 + +0.3 471,815 + -0.0 471,815 + +0.7 471,815 + +1.7 471,815 + -0.1 471,815 + +1.3 471,815 + -0.8 471,816 - +1.0 471,816 - -1.1 471,822 + +1.0 471,892 + +0.1 471,892 + -0.6 471,892 + +1.2 471,892 + -0.4 471,892 + +0.3 471,892 + -3.1 471,893 - -0.8 471,893 - -1.9 471,896 + -0.1 471,896 + +0.6 471,897 - +0.7 471,917 + -0.3 471,917 + -0.1 471,917 + +0.1 471,917 + -0.7 471,917 + +0.1 471,918 - +0.5 471,920 + -0.3 471,936 + +0.9 471,937 - +0.4 471,937 - -0.4 471,937 - +0.0 471,941 + -0.5 471,941 + +0.9 471,941 + -1.8 471,941 + +0.2 471,941 + -0.2 471,941 + +0.5 471,942 - +0.0 471,942 - -1.5 471,942 - +1.0 471,971 + +0.5 471,971 + +0.4 471,972 - +0.2 471,989 - +0.3 471,989 - -0.9 472,035 + -1.3 472,036 - +1.5 472,036 - -0.1 472,037 + -2.8 472,037 + -0.9 472,037 + -0.1 472,038 - -0.6 472,038 - +0.1 472,318 + +0.5 472,318 + -0.5 472,347 + -0.1 472,347 + -0.1 472,347 + +0.0 472,347 + +1.1 472,347 + +0.4 472,347 + +0.0 472,347 + -0.2 472,347 + -0.4 472,347 + +0.3 472,347 + -0.2 472,347 + -0.3 472,348 - -0.1 472,348 - -0.3 472,348 - -1.6 472,348 - -0.3 472,348 - -0.6 472,348 - -0.7 472,348 - +1.1 472,348 - -0.9 472,348 - -0.7 472,348 - -1.1 472,348 - -0.9 472,412 + -1.1 472,412 + +0.3 472,412 + +0.3
Or see this region's nucleotide sequence