Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22875

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,263,828	+		DZA65_RS10685	0.34	-0.2
2,263,843	+		DZA65_RS10685	0.36	-0.1
2,263,975	+		DZA65_RS10685	0.58	-1.7
2,263,975	+				-0.2
2,263,975	+		DZA65_RS10685	0.58	+0.3
2,263,976	-		DZA65_RS10685	0.58	-1.1
2,263,976	-		DZA65_RS10685	0.58	+0.3
2,263,979	+		DZA65_RS10685	0.59	-0.2
2,263,980	-		DZA65_RS10685	0.59	-0.7
2,263,985	+		DZA65_RS10685	0.60	-1.1
2,263,985	+		DZA65_RS10685	0.60	-0.2
2,263,985	+		DZA65_RS10685	0.60	+1.0
2,263,986	-		DZA65_RS10685	0.60	+0.3
2,264,069	+		DZA65_RS10685	0.74	+0.3
2,264,069	+		DZA65_RS10685	0.74	+0.3
2,264,081	-		DZA65_RS10685	0.76	-1.2
2,264,113	+		DZA65_RS10685	0.81	-0.5
2,264,123	+		DZA65_RS10685	0.83	-0.4
2,264,123	+		DZA65_RS10685	0.83	+0.1
2,264,195	+				+1.3
2,264,208	-				+0.8
2,264,293	-				+0.3
2,264,356	-				-0.1
2,264,396	-		DZA65_RS10690	0.12	+0.8
2,264,396	-		DZA65_RS10690	0.12	+0.1
2,264,608	-				-1.1
2,264,608	-				-0.2
2,264,780	-				-1.8
2,264,783	+				-0.5
2,264,784	-				+0.7
2,264,802	+				+0.0
2,264,806	+				+0.1
2,264,807	-				-1.4
2,264,807	-				-1.5
2,264,826	+				-1.5
2,264,946	-		DZA65_RS22875	0.76	-0.8
2,264,968	+				-1.5
2,264,968	+				-0.5
2,264,977	+				-1.4
2,264,984	-				+0.3
2,265,037	-				-0.6
2,265,075	-				-0.1
2,265,100	-				-0.2
2,265,152	-				+0.1
2,265,154	-				-1.4
2,265,154	-				+0.1
2,265,154	-				-2.4
2,265,154	-				+0.4
2,265,171	+				-1.5
2,265,197	-				+0.3
2,265,364	-				-0.2
2,265,379	+				-0.1
2,265,379	+				-2.1
2,265,416	+				+0.0
2,265,641	-		DZA65_RS10700	0.30	-1.2
2,265,641	-		DZA65_RS10700	0.30	+0.8
2,265,677	-		DZA65_RS10700	0.37	-0.5
2,265,694	+		DZA65_RS10700	0.40	+1.2
2,265,716	-		DZA65_RS10700	0.44	-0.7
2,265,725	-		DZA65_RS10700	0.46	-0.4
2,265,725	-		DZA65_RS10700	0.46	-0.5
2,265,779	+		DZA65_RS10700	0.57	-0.2
2,265,883	+		DZA65_RS10700	0.77	-0.2
2,265,916	+		DZA65_RS10700	0.84	-1.0
2,265,916	+		DZA65_RS10700	0.84	+3.9
2,265,917	-		DZA65_RS10700	0.84	-0.5
2,265,917	-		DZA65_RS10700	0.84	-1.2
2,265,917	-		DZA65_RS10700	0.84	-0.2
2,265,917	-		DZA65_RS10700	0.84	-0.2