Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22830

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,468,610	+				-1.4
1,468,633	+				-0.3
1,468,724	-				+0.2
1,468,757	+				-1.0
1,468,758	-				-0.4
1,468,765	+				-1.0
1,468,765	+				-0.1
1,468,765	+				-0.3
1,468,796	-				+0.2
1,468,971	+				-1.5
1,468,971	+				-0.4
1,468,972	-				-0.8
1,468,973	+				-0.7
1,468,973	+				-1.2
1,468,974	-				+0.6
1,469,004	-				-0.8
1,469,260	+				-0.7
1,469,319	+				-1.8
1,469,337	+				-0.6
1,469,378	+				-0.1
1,469,382	+				+0.9
1,469,382	+				-1.7
1,469,382	+				-0.3
1,469,383	-				+0.5
1,469,383	-				-0.7
1,469,383	-				-2.0
1,469,403	+				+1.7
1,469,574	-				-1.0
1,469,607	+				-1.7
1,469,608	-				+0.1
1,469,626	+		DZA65_RS22830	0.10	-1.7
1,469,676	-		DZA65_RS22830	0.36	+1.0
1,469,676	-		DZA65_RS22830	0.36	-0.2
1,469,704	+		DZA65_RS22830	0.51	+2.1
1,469,716	+		DZA65_RS22830	0.57	-2.1
1,469,716	+				+1.9
1,469,717	-		DZA65_RS22830	0.58	-0.1
1,469,717	-		DZA65_RS22830	0.58	-2.1
1,469,717	-		DZA65_RS22830	0.58	-1.0
1,469,717	-		DZA65_RS22830	0.58	-0.1
1,469,718	+		DZA65_RS22830	0.58	-0.5
1,469,718	+		DZA65_RS22830	0.58	+1.9
1,469,719	-		DZA65_RS22830	0.59	+0.0
1,469,719	-		DZA65_RS22830	0.59	-0.2
1,469,719	-		DZA65_RS22830	0.59	+0.3
1,469,719	-		DZA65_RS22830	0.59	+0.5
1,469,801	+				-0.2
1,469,801	+				-1.5
1,469,801	+				+0.3
1,469,802	-				+0.2
1,469,803	+				-1.7
1,469,803	+				-0.7
1,469,804	-				+1.0
1,469,872	+				+0.2
1,469,872	+				+0.2
1,469,872	+				-0.6
1,469,872	+				-1.3
1,469,872	+				-0.8
1,469,872	+				+0.4
1,469,873	-				-0.4
1,469,873	-				-2.7
1,469,873	-				-0.5
1,469,873	-				+0.8
1,469,873	-				-1.5
1,469,873	-				-0.8
1,469,873	-				-0.8
1,469,873	-				-2.0
1,469,910	+				+0.2
1,469,914	+				+0.0
1,469,943	+				-0.1
1,469,943	+				-1.1
1,469,943	+				-0.5
1,469,944	-				-1.9
1,469,951	+				-1.3
1,470,102	-				-1.4
1,470,120	+				-0.1
1,470,121	-				-0.5
1,470,121	-				+1.1
1,470,123	-				-0.1
1,470,160	-				-0.9
1,470,160	-				-0.7
1,470,160	-				+0.9
1,470,187	-				-0.7
1,470,206	+				-0.7
1,470,207	-				+0.1
1,470,207	-				-0.5
1,470,207	-				+0.8
1,470,207	-				-0.8
1,470,232	-		DZA65_RS07085	0.12	-0.5
1,470,238	-		DZA65_RS07085	0.12	+0.5
1,470,262	-				-1.1
1,470,262	-		DZA65_RS07085	0.15	+0.2
1,470,344	-		DZA65_RS07085	0.22	-1.4
1,470,350	-		DZA65_RS07085	0.22	+0.2
1,470,350	-		DZA65_RS07085	0.22	-0.8
1,470,425	-		DZA65_RS07085	0.29	-1.5
1,470,485	-		DZA65_RS07085	0.34	+1.5
1,470,485	-		DZA65_RS07085	0.34	-1.3
1,470,498	-		DZA65_RS07085	0.35	+1.5
1,470,498	-		DZA65_RS07085	0.35	-0.9
1,470,498	-		DZA65_RS07085	0.35	+1.1
1,470,528	-		DZA65_RS07085	0.38	-1.2
1,470,528	-		DZA65_RS07085	0.38	+1.1
1,470,560	-		DZA65_RS07085	0.41	+0.2
1,470,560	-		DZA65_RS07085	0.41	+1.5
1,470,617	-		DZA65_RS07085	0.46	+0.7
1,470,617	-		DZA65_RS07085	0.46	+1.5
1,470,617	-		DZA65_RS07085	0.46	-0.4
1,470,617	-		DZA65_RS07085	0.46	+0.4
1,470,617	-		DZA65_RS07085	0.46	-0.9
1,470,617	-		DZA65_RS07085	0.46	-0.6
1,470,617	-		DZA65_RS07085	0.46	-0.0
1,470,636	-		DZA65_RS07085	0.47	-0.1
1,470,636	-		DZA65_RS07085	0.47	+1.1
1,470,636	-		DZA65_RS07085	0.47	-1.8
1,470,655	-		DZA65_RS07085	0.49	-0.1
1,470,655	-		DZA65_RS07085	0.49	-2.2
1,470,655	-		DZA65_RS07085	0.49	-0.3
1,470,655	-		DZA65_RS07085	0.49	-0.9
1,470,655	-		DZA65_RS07085	0.49	+0.5
1,470,655	-				+0.5
1,470,655	-		DZA65_RS07085	0.49	-0.8
1,470,655	-		DZA65_RS07085	0.49	+0.5
1,470,655	-		DZA65_RS07085	0.49	-1.7
1,470,655	-		DZA65_RS07085	0.49	-1.2
1,470,688	-		DZA65_RS07085	0.52	-0.2
1,470,766	-		DZA65_RS07085	0.59	-0.1
1,470,766	-		DZA65_RS07085	0.59	-1.5
1,470,766	-		DZA65_RS07085	0.59	-0.4
1,470,766	-		DZA65_RS07085	0.59	-1.2