Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21855

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,721,529	+		DZA65_RS21850	0.65	+0.6
4,721,559	+		DZA65_RS21850	0.68	-0.5
4,721,559	+		DZA65_RS21850	0.68	-0.5
4,721,559	+		DZA65_RS21850	0.68	-0.3
4,721,559	+		DZA65_RS21850	0.68	-0.8
4,721,559	+		DZA65_RS21850	0.68	-0.4
4,721,560	-		DZA65_RS21850	0.68	-1.4
4,721,560	-		DZA65_RS21850	0.68	-0.2
4,721,560	-		DZA65_RS21850	0.68	+0.1
4,721,560	-		DZA65_RS21850	0.68	-1.1
4,721,560	-		DZA65_RS21850	0.68	-0.2
4,721,560	-		DZA65_RS21850	0.68	-0.2
4,721,618	+		DZA65_RS21850	0.72	+2.5
4,721,619	-		DZA65_RS21850	0.72	+0.1
4,721,721	+		DZA65_RS21850	0.80	+1.1
4,721,721	+		DZA65_RS21850	0.80	+0.4
4,721,722	-		DZA65_RS21850	0.80	-0.5
4,721,728	+		DZA65_RS21850	0.81	-1.2
4,721,728	+		DZA65_RS21850	0.81	-1.0
4,721,728	+		DZA65_RS21850	0.81	+0.5
4,721,729	-		DZA65_RS21850	0.81	-0.9
4,721,729	-		DZA65_RS21850	0.81	-0.7
4,721,729	-		DZA65_RS21850	0.81	-0.3
4,721,739	-		DZA65_RS21850	0.82	-0.8
4,721,739	-		DZA65_RS21850	0.82	-2.1
4,721,739	-		DZA65_RS21850	0.82	-1.2
4,721,739	-		DZA65_RS21850	0.82	-0.5
4,721,739	-		DZA65_RS21850	0.82	-0.6
4,721,811	+		DZA65_RS21850	0.87	-1.3
4,721,811	+		DZA65_RS21850	0.87	-0.1
4,721,898	-				+0.2
4,721,925	+				-1.6
4,721,928	+				-0.1
4,721,928	+				-2.1
4,721,932	+				-1.4
4,721,933	-				+0.1
4,721,933	-				+1.0
4,721,933	-				-1.1
4,721,976	+				+0.2
4,721,977	-				+0.0
4,722,053	+				+1.8
4,722,076	+				+0.2
4,722,083	-				-2.2
4,722,083	-				-2.0
4,722,090	+				-0.6
4,722,090	+				-0.5
4,722,227	+				+0.5
4,722,274	-				+0.4
4,722,305	+				-1.5
4,722,305	+				+0.2
4,722,306	-				-1.0
4,722,306	-				-0.0
4,722,307	+				+0.3
4,722,319	+				+0.2
4,722,319	+				-1.2
4,722,361	+				-0.4
4,722,362	-				-0.4
4,722,379	-				+0.2
4,722,382	+				+0.0
4,722,423	+				+0.8
4,722,424	-				-1.6
4,722,424	-				-1.3
4,722,424	-				-1.0
4,722,426	+				-0.7
4,722,426	+				-3.0
4,722,426	+				-0.8
4,722,426	+				-1.7
4,722,426	+				-0.2
4,722,427	-				-1.5
4,722,427	-				-1.8
4,722,427	-				-0.5
4,722,427	-				-0.2
4,722,427	-				-0.2
4,722,427	-				-1.1
4,722,511	+		DZA65_RS21855	0.13	-0.9
4,722,511	+		DZA65_RS21855	0.13	+0.5
4,722,511	+		DZA65_RS21855	0.13	-2.4
4,722,511	+		DZA65_RS21855	0.13	-0.7
4,722,512	-		DZA65_RS21855	0.14	+0.2
4,722,512	-		DZA65_RS21855	0.14	+0.3
4,722,512	-		DZA65_RS21855	0.14	-1.0
4,722,516	+		DZA65_RS21855	0.14	-0.6
4,722,516	+		DZA65_RS21855	0.14	+0.3
4,722,516	+		DZA65_RS21855	0.14	-1.4
4,722,516	+		DZA65_RS21855	0.14	-0.7
4,722,516	+		DZA65_RS21855	0.14	-2.4
4,722,516	+		DZA65_RS21855	0.14	-1.4
4,722,517	-		DZA65_RS21855	0.14	-0.3
4,722,517	-		DZA65_RS21855	0.14	-0.7
4,722,517	-		DZA65_RS21855	0.14	-2.6
4,722,517	-		DZA65_RS21855	0.14	+1.5
4,722,517	-		DZA65_RS21855	0.14	+0.8
4,722,577	+		DZA65_RS21855	0.20	-1.4
4,722,577	+		DZA65_RS21855	0.20	-0.4
4,722,577	+		DZA65_RS21855	0.20	-0.8
4,722,578	-		DZA65_RS21855	0.20	-0.2
4,722,578	-		DZA65_RS21855	0.20	+1.3
4,722,578	-		DZA65_RS21855	0.20	-1.2
4,722,578	-		DZA65_RS21855	0.20	-0.9
4,722,578	-		DZA65_RS21855	0.20	-1.9
4,722,578	-		DZA65_RS21855	0.20	-2.1
4,722,585	+		DZA65_RS21855	0.21	-2.3
4,722,585	+		DZA65_RS21855	0.21	-0.5
4,722,586	-		DZA65_RS21855	0.21	-0.9
4,722,586	-		DZA65_RS21855	0.21	+0.5
4,722,624	+		DZA65_RS21855	0.25	-1.6
4,722,624	+		DZA65_RS21855	0.25	-0.6
4,722,624	+		DZA65_RS21855	0.25	-0.2
4,722,625	-		DZA65_RS21855	0.25	-2.1
4,722,625	-		DZA65_RS21855	0.25	-2.4
4,722,625	-		DZA65_RS21855	0.25	+0.0
4,722,630	+		DZA65_RS21855	0.25	-0.2
4,722,630	+		DZA65_RS21855	0.25	-1.2
4,722,630	+		DZA65_RS21855	0.25	-0.7
4,722,630	+		DZA65_RS21855	0.25	-2.1
4,722,631	-				+0.8
4,722,631	-		DZA65_RS21855	0.25	-0.9
4,722,631	-		DZA65_RS21855	0.25	+0.6
4,722,636	+		DZA65_RS21855	0.26	-0.7
4,722,636	+		DZA65_RS21855	0.26	-0.3
4,722,636	+		DZA65_RS21855	0.26	-1.6
4,722,636	+		DZA65_RS21855	0.26	+0.8
4,722,636	+		DZA65_RS21855	0.26	-0.2
4,722,636	+		DZA65_RS21855	0.26	+0.9
4,722,636	+		DZA65_RS21855	0.26	-0.5
4,722,637	-		DZA65_RS21855	0.26	-1.1
4,722,637	-		DZA65_RS21855	0.26	-0.6
4,722,637	-		DZA65_RS21855	0.26	-0.6
4,722,646	+		DZA65_RS21855	0.27	-0.4
4,722,647	-		DZA65_RS21855	0.27	-0.2
4,722,660	+		DZA65_RS21855	0.28	-1.6
4,722,853	-		DZA65_RS21855	0.48	+0.1
4,722,853	-		DZA65_RS21855	0.48	+0.2
4,722,873	+		DZA65_RS21855	0.50	-0.1
4,722,873	+		DZA65_RS21855	0.50	-0.5
4,722,873	+		DZA65_RS21855	0.50	-1.0
4,722,873	+		DZA65_RS21855	0.50	-0.8
4,722,873	+		DZA65_RS21855	0.50	-1.5
4,722,873	+		DZA65_RS21855	0.50	-0.4
4,722,873	+		DZA65_RS21855	0.50	-0.5
4,722,873	+		DZA65_RS21855	0.50	-2.2
4,722,873	+		DZA65_RS21855	0.50	+1.4
4,722,873	+		DZA65_RS21855	0.50	+0.2
4,722,873	+		DZA65_RS21855	0.50	+0.8
4,722,873	+		DZA65_RS21855	0.50	-1.1
4,722,873	+		DZA65_RS21855	0.50	-1.2
4,722,873	+		DZA65_RS21855	0.50	+0.6
4,722,873	+		DZA65_RS21855	0.50	-1.0
4,722,873	+		DZA65_RS21855	0.50	-0.4
4,722,873	+		DZA65_RS21855	0.50	+0.0
4,722,873	+		DZA65_RS21855	0.50	+0.3
4,722,873	+		DZA65_RS21855	0.50	+0.2
4,722,873	+		DZA65_RS21855	0.50	+0.6
4,722,873	+		DZA65_RS21855	0.50	+0.4
4,722,873	+		DZA65_RS21855	0.50	-0.9
4,722,873	+		DZA65_RS21855	0.50	+0.8
4,722,873	+				-0.5
4,722,873	+		DZA65_RS21855	0.50	-0.2
4,722,873	+		DZA65_RS21855	0.50	-2.7
4,722,873	+		DZA65_RS21855	0.50	-2.4
4,722,873	+		DZA65_RS21855	0.50	-0.2
4,722,874	-		DZA65_RS21855	0.50	-1.2
4,722,874	-		DZA65_RS21855	0.50	-0.2
4,722,874	-		DZA65_RS21855	0.50	+0.6
4,722,874	-		DZA65_RS21855	0.50	+0.3
4,722,874	-		DZA65_RS21855	0.50	+1.5
4,722,874	-		DZA65_RS21855	0.50	+0.2
4,722,874	-		DZA65_RS21855	0.50	-1.8
4,722,874	-		DZA65_RS21855	0.50	-0.8
4,722,874	-		DZA65_RS21855	0.50	-1.6
4,722,874	-		DZA65_RS21855	0.50	+0.2
4,722,874	-		DZA65_RS21855	0.50	+1.2
4,722,874	-		DZA65_RS21855	0.50	-0.9
4,722,874	-		DZA65_RS21855	0.50	-0.0
4,722,874	-		DZA65_RS21855	0.50	-1.2
4,722,874	-		DZA65_RS21855	0.50	-1.0
4,722,874	-		DZA65_RS21855	0.50	-0.8
4,722,874	-		DZA65_RS21855	0.50	-0.6
4,722,874	-		DZA65_RS21855	0.50	-0.0
4,722,874	-		DZA65_RS21855	0.50	+1.2
4,722,874	-		DZA65_RS21855	0.50	+0.8
4,722,874	-		DZA65_RS21855	0.50	+0.2
4,722,874	-		DZA65_RS21855	0.50	+0.3
4,722,874	-		DZA65_RS21855	0.50	-0.1
4,722,874	-		DZA65_RS21855	0.50	-0.5
4,722,874	-		DZA65_RS21855	0.50	-2.0
4,722,874	-		DZA65_RS21855	0.50	-0.2
4,722,874	-		DZA65_RS21855	0.50	+0.5
4,722,874	-		DZA65_RS21855	0.50	-0.2
4,722,895	-		DZA65_RS21855	0.52	-1.5
4,722,895	-		DZA65_RS21855	0.52	+0.2
4,722,936	+		DZA65_RS21855	0.56	-1.8
4,722,937	+		DZA65_RS21855	0.56	+0.1
4,722,937	+		DZA65_RS21855	0.56	-1.8
4,722,937	+		DZA65_RS21855	0.56	+0.2
4,722,937	+		DZA65_RS21855	0.56	-1.8
4,722,937	+		DZA65_RS21855	0.56	-1.2
4,722,937	+		DZA65_RS21855	0.56	+1.0
4,722,937	+		DZA65_RS21855	0.56	+0.2
4,722,937	+		DZA65_RS21855	0.56	+0.4
4,722,937	+		DZA65_RS21855	0.56	-1.3
4,722,937	+		DZA65_RS21855	0.56	-1.2
4,722,937	+		DZA65_RS21855	0.56	-1.4
4,722,937	+		DZA65_RS21855	0.56	-0.8
4,722,938	-		DZA65_RS21855	0.56	+1.1
4,722,938	-		DZA65_RS21855	0.56	+1.8
4,722,941	-		DZA65_RS21855	0.56	-0.6
4,723,003	+		DZA65_RS21855	0.63	-1.6
4,723,003	+		DZA65_RS21855	0.63	-2.1
4,723,003	+		DZA65_RS21855	0.63	-2.4
4,723,003	+		DZA65_RS21855	0.63	-2.1
4,723,003	+		DZA65_RS21855	0.63	+2.8
4,723,003	+		DZA65_RS21855	0.63	-0.4
4,723,003	+		DZA65_RS21855	0.63	-0.6
4,723,004	-		DZA65_RS21855	0.63	-1.1
4,723,004	-		DZA65_RS21855	0.63	-1.0
4,723,004	-		DZA65_RS21855	0.63	+0.1
4,723,004	-		DZA65_RS21855	0.63	-1.1
4,723,004	-		DZA65_RS21855	0.63	+0.0
4,723,004	-		DZA65_RS21855	0.63	-0.3
4,723,004	-				-0.2
4,723,004	-		DZA65_RS21855	0.63	-1.6
4,723,004	-		DZA65_RS21855	0.63	+0.8
4,723,016	+		DZA65_RS21855	0.64	+0.8
4,723,016	+		DZA65_RS21855	0.64	-0.2
4,723,017	-		DZA65_RS21855	0.64	-1.2
4,723,017	-		DZA65_RS21855	0.64	+0.1
4,723,017	-		DZA65_RS21855	0.64	+0.8
4,723,017	-		DZA65_RS21855	0.64	+0.8
4,723,063	+		DZA65_RS21855	0.69	-0.8
4,723,064	-		DZA65_RS21855	0.69	-1.1
4,723,064	-		DZA65_RS21855	0.69	-0.6
4,723,104	+		DZA65_RS21855	0.73	-1.0
4,723,104	+		DZA65_RS21855	0.73	-1.4
4,723,104	+		DZA65_RS21855	0.73	-1.8
4,723,105	-		DZA65_RS21855	0.73	-0.0
4,723,105	-		DZA65_RS21855	0.73	+1.2
4,723,182	+		DZA65_RS21855	0.81	-0.3
4,723,182	+		DZA65_RS21855	0.81	+1.8
4,723,182	+		DZA65_RS21855	0.81	-0.1
4,723,238	-		DZA65_RS21855	0.86	+1.3
4,723,238	-		DZA65_RS21855	0.86	+1.8
4,723,285	+				-1.0
4,723,285	+				-1.2
4,723,285	+				-1.5
4,723,285	+				-0.8
4,723,286	-				-0.0
4,723,286	-				-2.4
4,723,286	-				-1.2
4,723,286	-				+0.5
4,723,287	+				-0.6
4,723,287	+				+0.8
4,723,288	-				+0.2
4,723,288	-				+1.0
4,723,288	-				+0.8
4,723,288	-				-0.5
4,723,288	-				-1.9
4,723,288	-				-1.4
4,723,370	+				+0.2
4,723,371	-				+0.5
4,723,371	-				+0.8
4,723,376	+				-0.5
4,723,376	+				-0.6
4,723,376	+				-0.6
4,723,376	+				+0.4
4,723,376	+				-1.8
4,723,376	+				+0.8
4,723,376	+				-0.5
4,723,376	+				+0.8
4,723,377	-				-1.4
4,723,377	-				-0.5
4,723,377	-				+0.2
4,723,377	-				-1.3
4,723,572	+		DZA65_RS21860	0.39	-0.5
4,723,572	+		DZA65_RS21860	0.39	-1.0
4,723,573	-		DZA65_RS21860	0.40	-0.5
4,723,573	-		DZA65_RS21860	0.40	-0.2
4,723,822	-				+0.8
4,723,824	+				+0.2
4,723,824	+				-1.8
4,723,824	+				+0.2
4,723,824	+				+0.2
4,723,824	+				-1.6
4,723,824	+				-0.8
4,723,824	+				-0.9
4,723,824	+				+0.4
4,723,824	+				-1.2
4,723,824	+				+0.5
4,723,824	+				-2.2
4,723,824	+				-0.9
4,723,825	-				-0.5
4,723,825	-				+2.4
4,723,825	-				+0.2
4,723,825	-				+0.3
4,723,825	-				-1.9
4,723,825	-				+0.7
4,723,825	-				+1.4
4,723,825	-				+0.8
4,723,825	-				-0.6
4,723,825	-				-1.0
4,723,829	+				+0.1
4,723,829	+				-0.1
4,723,829	+				+0.4
4,723,829	+				+0.5
4,723,829	+				-0.2
4,723,829	+				+0.2
4,723,829	+				-0.0
4,723,829	+				-1.0
4,723,829	+				-0.2
4,723,830	-				+0.5
4,723,830	-				+0.5
4,723,830	-				-1.6
4,723,830	-				-0.9
4,723,830	-				-0.6
4,723,830	-				+0.2
4,723,830	-				+0.6
4,723,830	-				-0.4
4,723,830	-				+0.5
4,723,830	-				+0.4
4,723,830	-				-0.8
4,723,859	+				-0.8
4,723,859	+				-0.6
4,723,859	+				+0.2
4,723,859	+				-1.0
4,723,859	+				-1.0
4,723,859	+				-0.5
4,723,859	+				-1.4
4,723,859	+				+0.1
4,723,859	+				-0.2
4,723,859	+				+0.8
4,723,859	+				+0.1
4,723,859	+				+0.1
4,723,860	-				-0.5
4,723,860	-				-1.1
4,723,860	-				+2.4
4,723,860	-				-0.2
4,723,860	-				-1.8
4,723,860	-				-0.5
4,723,860	-				-0.5
4,723,860	-				-2.3
4,723,860	-				-0.4
4,723,860	-				-0.8
4,723,860	-				-0.3
4,723,860	-				-0.2
4,723,878	-				-1.9
4,723,886	+				-0.2
4,723,886	+				+0.3
4,723,886	+				+1.5
4,723,908	+				+1.8
4,723,909	-				-0.2
4,723,909	-				-0.5
4,723,909	-				-0.8
4,723,910	+				-1.6
4,723,910	+				+1.8
4,723,910	+				+0.2
4,723,910	+				+0.3
4,723,911	-				-1.5
4,723,911	-				-0.6
4,723,911	-				-1.4
4,723,911	-				-0.3
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