Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21690

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,692,508	+		DZA65_RS21685	0.74	-1.2
4,692,508	+		DZA65_RS21685	0.74	-0.8
4,692,508	+		DZA65_RS21685	0.74	-0.4
4,692,509	-		DZA65_RS21685	0.74	+0.3
4,692,509	-		DZA65_RS21685	0.74	-0.2
4,692,509	-		DZA65_RS21685	0.74	+0.2
4,692,509	-		DZA65_RS21685	0.74	+0.1
4,692,509	-		DZA65_RS21685	0.74	-1.2
4,692,623	+		DZA65_RS21685	0.81	+0.2
4,692,718	+		DZA65_RS21685	0.87	-1.5
4,692,719	-		DZA65_RS21685	0.87	-1.8
4,692,901	+				+1.8
4,692,901	+				-1.4
4,692,902	-				+0.5
4,692,902	-				+1.0
4,692,924	+				+0.8
4,692,925	-				+0.2
4,692,942	-				+0.5
4,692,944	+				+0.1
4,692,944	+				-0.6
4,692,945	-				-0.8
4,692,945	-				-0.1
4,692,981	-				-0.4
4,692,981	-				-0.9
4,692,993	+				-1.6
4,692,993	+				-0.3
4,692,993	+				+2.2
4,692,993	+				+0.2
4,692,994	-				+0.4
4,692,994	-				+0.6
4,692,994	-				-0.4
4,692,994	-				-0.2
4,692,994	-				-0.1
4,692,994	-				+0.0
4,692,994	-				-0.6
4,692,994	-				-0.2
4,693,003	+				-0.9
4,693,004	-				+1.0
4,693,046	+				-0.6
4,693,046	+				-0.5
4,693,047	-				+0.7
4,693,047	-				-0.6
4,693,051	-				+0.2
4,693,105	+				-1.0
4,693,116	+				+1.2
4,693,138	+				-0.2
4,693,246	+				+0.0
4,693,249	+				+0.2
4,693,249	+				+0.8
4,693,250	-				-2.2
4,693,255	+				-0.9
4,693,291	-				+0.5
4,693,318	+				+0.1
4,693,337	-				+1.8
4,693,337	-				-0.2
4,693,389	-				+0.6
4,693,442	-				-0.1
4,693,442	-				-0.2
4,693,448	+				+1.2
4,693,448	+				+0.0
4,693,458	+				+0.2
4,693,458	+				-1.9
4,693,459	-				+0.0
4,693,493	+		DZA65_RS21690	0.10	-0.9
4,693,504	+		DZA65_RS21690	0.11	-0.5
4,693,505	-		DZA65_RS21690	0.11	+0.4
4,693,505	-		DZA65_RS21690	0.11	+0.6
4,693,616	+		DZA65_RS21690	0.18	-2.2
4,693,648	+		DZA65_RS21690	0.20	-0.9
4,693,686	-		DZA65_RS21690	0.22	-0.5
4,693,686	-		DZA65_RS21690	0.22	-0.6
4,693,686	-		DZA65_RS21690	0.22	-0.2
4,693,686	-		DZA65_RS21690	0.22	-0.9
4,694,001	+		DZA65_RS21690	0.41	-0.9
4,694,001	+		DZA65_RS21690	0.41	-0.7
4,694,001	+		DZA65_RS21690	0.41	-1.2
4,694,001	+		DZA65_RS21690	0.41	-1.0
4,694,001	+		DZA65_RS21690	0.41	+1.5
4,694,001	+		DZA65_RS21690	0.41	-1.8
4,694,001	+		DZA65_RS21690	0.41	-0.5
4,694,002	-		DZA65_RS21690	0.41	+0.2
4,694,002	-		DZA65_RS21690	0.41	-0.7
4,694,002	-		DZA65_RS21690	0.41	-0.2
4,694,002	-		DZA65_RS21690	0.41	+0.2
4,694,002	-		DZA65_RS21690	0.41	+1.4
4,694,002	-		DZA65_RS21690	0.41	-0.8
4,694,013	-		DZA65_RS21690	0.42	+0.5
4,694,026	+		DZA65_RS21690	0.43	-0.6
4,694,026	+		DZA65_RS21690	0.43	-0.5
4,694,210	+		DZA65_RS21690	0.54	+0.2
4,694,418	-		DZA65_RS21690	0.67	-0.4
4,694,421	-		DZA65_RS21690	0.67	+0.5
4,694,421	-		DZA65_RS21690	0.67	-1.0
4,694,421	-		DZA65_RS21690	0.67	-1.6
4,694,421	-		DZA65_RS21690	0.67	+1.2
4,694,692	+		DZA65_RS21690	0.84	-1.6
4,694,875	+				-0.2
4,694,972	+				+0.4
4,694,972	+				-0.1
4,694,972	+				-0.7
4,694,973	-				-0.8
4,694,973	-				-2.0
4,694,973	-				-0.4
4,694,973	-				+0.3
4,694,973	-				+0.2
4,694,974	+				+0.6
4,694,974	+				-0.5
4,694,974	+				+0.5
4,694,974	+				+0.2
4,694,974	+				-0.2
4,694,974	+				+1.4
4,694,974	+				-1.2
4,694,975	-				-0.6
4,694,975	-				-0.5
4,694,989	+				-1.2
4,694,989	+				-1.8
4,694,989	+				-0.8
4,694,989	+				-0.2
4,694,989	+				-0.5
4,694,990	-				-0.9
4,694,990	-				-1.5
4,694,990	-				+0.1
4,694,990	-				+0.7
4,694,990	-				-0.0
4,694,991	+				-1.4
4,694,991	+				-0.9
4,694,991	+				-1.0
4,694,991	+				-2.4
4,694,991	+				-0.7
4,694,991	+				-1.2
4,694,991	+				-0.5
4,694,991	+				-1.0
4,694,991	+				-1.2
4,694,992	-				-1.9
4,694,992	-				-1.1
4,694,992	-				-0.1
4,694,992	-				-1.4
4,694,994	+				-1.2
4,694,994	+				+0.0
4,694,994	+				+0.2
4,694,994	+				-0.2
4,694,994	+				-0.5
4,694,995	-				+0.4
4,694,995	-				-0.8
4,694,995	-				+0.7
4,694,995	-				+1.3
4,694,995	-				-0.1
4,694,995	-				+0.2
4,694,995	-				+1.8
4,694,995	-				+0.2
4,695,039	+				+0.8
4,695,039	+				-1.5
4,695,040	-				-0.4
4,695,040	-				-0.9
4,695,040	-				-1.2
4,695,040	-				-1.4
4,695,095	-				-2.0
4,695,184	+		DZA65_RS21695	0.13	-0.2
4,695,184	+		DZA65_RS21695	0.13	-0.6
4,695,185	-		DZA65_RS21695	0.13	-0.4
4,695,185	-		DZA65_RS21695	0.13	-0.2
4,695,185	-		DZA65_RS21695	0.13	-1.1
4,695,195	-		DZA65_RS21695	0.14	-1.2
4,695,195	-		DZA65_RS21695	0.14	+0.0
4,695,196	+		DZA65_RS21695	0.14	-0.9
4,695,290	+		DZA65_RS21695	0.25	-0.4
4,695,601	+		DZA65_RS21695	0.59	-2.0
4,695,601	+		DZA65_RS21695	0.59	-0.6
4,695,647	+		DZA65_RS21695	0.64	-0.2
4,695,772	+		DZA65_RS21695	0.78	+0.0
4,695,772	+		DZA65_RS21695	0.78	-0.3
4,695,773	-		DZA65_RS21695	0.78	+1.3
4,695,773	-		DZA65_RS21695	0.78	-0.5
4,695,889	+				-0.6
4,695,889	+				-1.6
4,695,890	-				+0.3
4,695,928	+				-0.4
4,695,928	+				-1.0
4,695,929	-				+0.2
4,695,929	-				-0.1