Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21640

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,677,253	+				-0.4
4,677,253	+				-1.6
4,677,254	-				-0.2
4,677,254	-				-0.5
4,677,299	+		DZA65_RS21630	0.18	+0.5
4,677,299	+		DZA65_RS21630	0.18	-0.2
4,677,299	+		DZA65_RS21630	0.18	-0.9
4,677,300	-		DZA65_RS21630	0.19	+0.5
4,677,300	-		DZA65_RS21630	0.19	+2.2
4,677,300	-		DZA65_RS21630	0.19	-0.4
4,677,407	-		DZA65_RS21630	0.42	-1.4
4,677,490	+		DZA65_RS21630	0.60	+0.6
4,677,490	+		DZA65_RS21630	0.60	-1.8
4,677,491	-		DZA65_RS21630	0.60	-0.2
4,677,491	-		DZA65_RS21630	0.60	-0.4
4,677,491	-		DZA65_RS21630	0.60	-0.4
4,677,491	-		DZA65_RS21630	0.60	-0.7
4,677,491	-		DZA65_RS21630	0.60	-1.2
4,677,526	+		DZA65_RS21630	0.67	-0.6
4,677,623	+		DZA65_RS21630	0.88	-2.1
4,677,626	+		DZA65_RS21630	0.89	-0.5
4,677,626	+		DZA65_RS21630	0.89	+0.8
4,677,626	+		DZA65_RS21630	0.89	+1.0
4,677,626	+		DZA65_RS21630	0.89	+0.6
4,677,626	+		DZA65_RS21630	0.89	-1.5
4,677,626	+		DZA65_RS21630	0.89	-0.6
4,677,626	+		DZA65_RS21630	0.89	-0.7
4,677,626	+		DZA65_RS21630	0.89	-0.3
4,677,626	+		DZA65_RS21630	0.89	-0.1
4,677,627	-		DZA65_RS21630	0.89	+1.0
4,677,627	-		DZA65_RS21630	0.89	+2.5
4,677,627	-		DZA65_RS21630	0.89	-0.8
4,677,658	+				-0.4
4,677,659	-				+0.8
4,677,659	-				-0.4
4,677,668	+				+1.4
4,677,668	+				-2.2
4,677,680	+				+1.1
4,677,680	+				-0.3
4,677,681	-				-1.4
4,677,681	-				+0.2
4,677,681	-				-0.3
4,677,681	-				-0.6
4,677,681	-				-0.2
4,677,691	-				-1.1
4,677,712	-				+0.1
4,677,712	-				-1.6
4,677,712	-				-0.4
4,677,713	+				-0.8
4,677,750	-				-0.5
4,677,798	+				+2.4
4,677,810	+				-0.2
4,677,810	+				-0.5
4,677,811	-				+1.2
4,677,811	-				+0.9
4,677,811	-				+0.5
4,677,854	+				-0.1
4,677,855	-				+1.2
4,677,857	+				-0.2
4,677,857	+				-0.1
4,677,858	-				+0.2
4,677,858	-				-2.6
4,677,858	-				-0.8
4,677,918	-		DZA65_RS21635	0.19	-0.5
4,677,951	+		DZA65_RS21635	0.32	-0.9
4,677,951	+		DZA65_RS21635	0.32	+0.8
4,677,951	+		DZA65_RS21635	0.32	+0.4
4,677,951	+		DZA65_RS21635	0.32	-1.0
4,677,951	+		DZA65_RS21635	0.32	-0.2
4,677,951	+		DZA65_RS21635	0.32	+1.1
4,677,952	-		DZA65_RS21635	0.32	-0.2
4,677,955	-		DZA65_RS21635	0.33	-0.7
4,677,978	+		DZA65_RS21635	0.42	+0.4
4,677,978	+		DZA65_RS21635	0.42	-1.1
4,677,978	+		DZA65_RS21635	0.42	-0.1
4,677,978	+		DZA65_RS21635	0.42	-0.5
4,677,979	-		DZA65_RS21635	0.43	+0.4
4,678,018	-		DZA65_RS21635	0.57	+0.2
4,678,051	+		DZA65_RS21635	0.70	+0.4
4,678,051	+		DZA65_RS21635	0.70	+0.2
4,678,052	-		DZA65_RS21635	0.70	-1.0
4,678,052	-		DZA65_RS21635	0.70	+0.5
4,678,113	+				+0.6
4,678,114	-				+0.0
4,678,180	+				-1.2
4,678,181	-				+1.1
4,678,181	-				-0.5
4,678,221	-				+0.2
4,678,280	+		DZA65_RS21640	0.11	+1.1
4,678,280	+		DZA65_RS21640	0.11	-1.4
4,678,281	-		DZA65_RS21640	0.11	-0.7
4,678,281	-		DZA65_RS21640	0.11	-2.3
4,678,281	-		DZA65_RS21640	0.11	-0.2
4,678,300	+		DZA65_RS21640	0.13	-1.1
4,678,300	+		DZA65_RS21640	0.13	+1.4
4,678,300	+		DZA65_RS21640	0.13	-2.0
4,678,300	+		DZA65_RS21640	0.13	-1.0
4,678,300	+		DZA65_RS21640	0.13	-0.8
4,678,301	-		DZA65_RS21640	0.13	+0.9
4,678,301	-		DZA65_RS21640	0.13	-1.3
4,678,301	-		DZA65_RS21640	0.13	-0.2
4,678,304	+		DZA65_RS21640	0.13	-0.2
4,678,304	+		DZA65_RS21640	0.13	-1.5
4,678,304	+		DZA65_RS21640	0.13	-0.8
4,678,304	+		DZA65_RS21640	0.13	-0.6
4,678,304	+		DZA65_RS21640	0.13	+0.8
4,678,305	-		DZA65_RS21640	0.13	+0.2
4,678,305	-		DZA65_RS21640	0.13	+0.6
4,678,305	-		DZA65_RS21640	0.13	-0.2
4,678,404	+		DZA65_RS21640	0.24	-2.4
4,678,427	+		DZA65_RS21640	0.26	-0.6
4,678,427	+		DZA65_RS21640	0.26	-1.9
4,678,428	-		DZA65_RS21640	0.26	+0.0
4,678,428	-		DZA65_RS21640	0.26	-0.4
4,678,428	-		DZA65_RS21640	0.26	-0.9
4,678,428	-		DZA65_RS21640	0.26	-0.0
4,678,463	-		DZA65_RS21640	0.30	-0.8
4,678,509	+		DZA65_RS21640	0.34	-0.6
4,678,509	+		DZA65_RS21640	0.34	+1.2
4,678,509	+		DZA65_RS21640	0.34	-1.0
4,678,509	+		DZA65_RS21640	0.34	+0.1
4,678,509	+		DZA65_RS21640	0.34	-1.4
4,678,509	+		DZA65_RS21640	0.34	-1.9
4,678,509	+		DZA65_RS21640	0.34	+0.8
4,678,509	+		DZA65_RS21640	0.34	-2.6
4,678,509	+		DZA65_RS21640	0.34	-1.6
4,678,509	+		DZA65_RS21640	0.34	-0.5
4,678,510	-		DZA65_RS21640	0.35	+1.2
4,678,510	-		DZA65_RS21640	0.35	-1.0
4,678,510	-		DZA65_RS21640	0.35	-0.2
4,678,510	-		DZA65_RS21640	0.35	+0.6
4,678,510	-		DZA65_RS21640	0.35	+0.1
4,678,510	-		DZA65_RS21640	0.35	+0.0
4,678,524	-		DZA65_RS21640	0.36	-2.8
4,678,535	+		DZA65_RS21640	0.37	+0.3
4,678,535	+		DZA65_RS21640	0.37	-0.2
4,678,535	+		DZA65_RS21640	0.37	-1.9
4,678,536	-		DZA65_RS21640	0.37	+0.2
4,678,536	-		DZA65_RS21640	0.37	-1.0
4,678,536	-		DZA65_RS21640	0.37	-0.4
4,678,536	-		DZA65_RS21640	0.37	-0.2
4,678,536	-		DZA65_RS21640	0.37	-1.0
4,678,573	+		DZA65_RS21640	0.41	-0.4
4,678,573	+		DZA65_RS21640	0.41	-0.5
4,678,808	+		DZA65_RS21640	0.66	-1.2
4,678,809	-		DZA65_RS21640	0.66	-1.1
4,678,809	-		DZA65_RS21640	0.66	-0.8
4,678,854	+		DZA65_RS21640	0.71	-0.2
4,679,060	-				+1.1
4,679,060	-				-0.3
4,679,123	+				-1.0
4,679,124	-				-1.2
4,679,124	-				+0.4
4,679,124	-				+0.4
4,679,186	+				-1.2
4,679,206	-				-0.4
4,679,206	-				+0.2
4,679,206	-				-0.8
4,679,244	+				-1.8
4,679,245	-				-1.0
4,679,325	-				+1.8
4,679,325	-				-1.6
4,679,325	-				-1.6
4,679,328	+				+0.1
4,679,328	+				+2.5
4,679,328	+				-0.5
4,679,328	+				+0.2
4,679,328	+				-0.3
4,679,329	-				-1.5
4,679,329	-				+0.2
4,679,350	+				-0.4
4,679,351	-				-1.0
4,679,421	+		DZA65_RS21645	0.13	-0.7
4,679,421	+		DZA65_RS21645	0.13	-1.1
4,679,421	+		DZA65_RS21645	0.13	+1.8
4,679,422	-		DZA65_RS21645	0.13	-1.6
4,679,423	+		DZA65_RS21645	0.13	-0.5
4,679,423	+		DZA65_RS21645	0.13	-0.8
4,679,423	+		DZA65_RS21645	0.13	+0.6
4,679,423	+		DZA65_RS21645	0.13	+0.1
4,679,423	+		DZA65_RS21645	0.13	-0.9
4,679,423	+		DZA65_RS21645	0.13	-0.9
4,679,423	+		DZA65_RS21645	0.13	-0.9
4,679,423	+		DZA65_RS21645	0.13	+1.0
4,679,424	-		DZA65_RS21645	0.14	-0.9
4,679,424	-		DZA65_RS21645	0.14	-0.8
4,679,424	-		DZA65_RS21645	0.14	-1.5
4,679,424	-		DZA65_RS21645	0.14	+0.1
4,679,424	-		DZA65_RS21645	0.14	-1.4
4,679,424	-		DZA65_RS21645	0.14	+0.1
4,679,424	-		DZA65_RS21645	0.14	+0.4
4,679,424	-		DZA65_RS21645	0.14	-0.3
4,679,424	-		DZA65_RS21645	0.14	-0.2
4,679,424	-		DZA65_RS21645	0.14	-1.1
4,679,424	-		DZA65_RS21645	0.14	-1.6
4,679,490	+		DZA65_RS21645	0.22	+0.2
4,679,650	-		DZA65_RS21645	0.44	-0.4
4,679,745	-		DZA65_RS21645	0.57	-1.2
4,679,745	-		DZA65_RS21645	0.57	-1.2
4,680,099	+				-0.3
4,680,099	+				-0.5
4,680,099	+				-0.9
4,680,099	+				+0.2
4,680,099	+				+0.2
4,680,099	+				-1.6
4,680,099	+				-0.3
4,680,100	-				-0.5
4,680,100	-				-1.5
4,680,100	-				-1.1
4,680,100	-				+0.2
4,680,100	-				-0.0
4,680,101	+				+0.4
4,680,101	+				-0.5
4,680,101	+				+0.0
4,680,101	+				-0.5
4,680,101	+				+0.5
4,680,101	+				-2.6
4,680,101	+				-1.5