Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21615

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,671,671	-				+0.3
4,671,671	-				-1.1
4,671,708	+				+0.2
4,671,708	+				-2.5
4,671,709	-				-2.3
4,671,709	-				-0.2
4,671,709	-				-0.5
4,671,709	-				-0.4
4,671,716	+				-0.5
4,671,716	+				-0.6
4,671,716	+				-0.9
4,671,716	+				+0.2
4,671,716	+				+0.7
4,671,716	+				+0.8
4,671,717	-				+1.0
4,671,717	-				-0.9
4,671,717	-				+0.8
4,671,717	-				-0.6
4,671,717	-				+0.4
4,671,717	-				-0.5
4,671,717	-				+0.2
4,671,721	+				+0.8
4,671,721	+				+0.4
4,671,721	+				+0.4
4,671,721	+				-0.5
4,671,721	+				+1.0
4,671,722	-				+0.6
4,671,722	-				+0.2
4,671,722	-				+0.2
4,671,722	-				-1.6
4,671,722	-				+0.8
4,671,722	-				-0.5
4,671,734	+				-0.4
4,671,735	-				-1.0
4,671,735	-				-0.6
4,671,742	+				+0.8
4,671,742	+				-1.6
4,671,743	-				-0.6
4,671,743	-				+1.8
4,671,743	-				-0.5
4,671,743	-				-0.1
4,671,743	-				-1.0
4,671,743	-				-0.6
4,671,743	-				-0.4
4,671,760	-				-0.2
4,671,760	-				-0.5
4,671,760	-				-0.6
4,671,773	+				+0.2
4,671,773	+				-1.6
4,671,773	+				+0.0
4,671,773	+				+0.2
4,671,773	+				-0.4
4,671,773	+				+0.3
4,671,774	-				-0.4
4,671,774	-				+1.5
4,671,774	-				-0.8
4,671,774	-				-0.8
4,671,774	-				+0.0
4,671,797	+				-0.8
4,671,797	+				-0.6
4,671,797	+				+0.4
4,671,798	-				+1.8
4,671,798	-				-0.2
4,671,798	-				+0.1
4,671,802	+				+1.8
4,671,802	+				+0.2
4,671,803	-				-0.5
4,671,803	-				-1.4
4,671,803	-				+1.5
4,671,803	-				-0.5
4,671,803	-				-0.5
4,671,836	+				-0.9
4,671,837	-				-1.9
4,671,837	-				-0.6
4,671,837	-				+0.4
4,671,846	+				-1.2
4,671,846	+				-1.2
4,671,846	+				+0.8
4,671,846	+				-0.5
4,671,846	+				-0.9
4,671,847	-				+1.8
4,671,860	-				+1.4
4,671,860	-				-1.8
4,671,870	+				+1.2
4,671,870	+				-0.9
4,671,871	-				-1.0
4,671,871	-				+0.5
4,671,871	-				-0.2
4,671,871	-				+1.0
4,671,871	-				-0.8
4,671,871	-				-0.5
4,671,871	-				-0.9
4,671,878	-				+2.1
4,671,878	-				+0.4
4,671,895	-				-0.5
4,671,895	-				-1.9
4,671,898	+				-0.3
4,671,898	+				-0.1
4,671,898	+				+1.0
4,671,899	-				-0.3
4,671,899	-				-0.5
4,671,899	-				+0.3
4,671,899	-				+0.4
4,671,899	-				-0.5
4,671,899	-				-1.0
4,671,899	-				+0.8
4,671,910	-				-1.6
4,672,017	-		DZA65_RS21610	0.16	+0.6
4,672,087	-		DZA65_RS21610	0.26	+0.4
4,672,087	-		DZA65_RS21610	0.26	-0.6
4,672,087	-		DZA65_RS21610	0.26	-0.6
4,672,192	+		DZA65_RS21610	0.41	+0.0
4,672,193	-		DZA65_RS21610	0.41	+0.1
4,672,193	-		DZA65_RS21610	0.41	-0.2
4,672,193	-		DZA65_RS21610	0.41	+1.8
4,672,193	-		DZA65_RS21610	0.41	+0.4
4,672,400	-		DZA65_RS21610	0.71	-1.0
4,672,400	-		DZA65_RS21610	0.71	-0.5
4,672,503	+				+1.8
4,672,503	+		DZA65_RS21610	0.86	-1.6
4,672,503	+		DZA65_RS21610	0.86	-0.4
4,672,503	+		DZA65_RS21610	0.86	-1.3
4,672,503	+		DZA65_RS21610	0.86	+1.8
4,672,503	+		DZA65_RS21610	0.86	-0.2
4,672,503	+		DZA65_RS21610	0.86	-0.2
4,672,503	+				-0.2
4,672,503	+		DZA65_RS21610	0.86	-1.0
4,672,503	+		DZA65_RS21610	0.86	-3.1
4,672,504	-		DZA65_RS21610	0.86	-2.2
4,672,504	-		DZA65_RS21610	0.86	+0.0
4,672,504	-		DZA65_RS21610	0.86	-0.4
4,672,504	-		DZA65_RS21610	0.86	-0.6
4,672,504	-		DZA65_RS21610	0.86	-0.5
4,672,504	-				+0.2
4,672,504	-		DZA65_RS21610	0.86	-1.5
4,672,504	-		DZA65_RS21610	0.86	+0.8
4,672,504	-		DZA65_RS21610	0.86	+0.6
4,672,504	-		DZA65_RS21610	0.86	-1.2
4,672,504	-				+0.2
4,672,504	-		DZA65_RS21610	0.86	-1.8
4,672,504	-		DZA65_RS21610	0.86	-1.2
4,672,558	-				+0.0
4,672,579	+				-0.5
4,672,580	-				+0.5
4,672,618	+				-0.2
4,672,618	+				+0.5
4,672,618	+				-1.0
4,672,618	+				+0.2
4,672,618	+				-0.2
4,672,618	+				+1.4
4,672,618	+				+0.2
4,672,618	+				-1.4
4,672,618	+				-0.7
4,672,619	-				-0.2
4,672,619	-				-0.2
4,672,619	-				-0.6
4,672,619	-				+0.6
4,672,619	-				-1.0
4,672,619	-				-0.1
4,672,634	-				-1.5
4,672,651	+				-0.4
4,672,651	+				-0.3
4,672,812	+		DZA65_RS21615	0.14	-1.6
4,672,985	+		DZA65_RS21615	0.27	-0.4
4,673,035	+		DZA65_RS21615	0.30	-1.6
4,673,035	+		DZA65_RS21615	0.30	-0.2
4,673,036	-		DZA65_RS21615	0.30	-0.5
4,673,036	-		DZA65_RS21615	0.30	+0.8
4,673,048	+		DZA65_RS21615	0.31	-0.6
4,673,049	-		DZA65_RS21615	0.31	+0.8
4,673,049	-		DZA65_RS21615	0.31	-1.1
4,673,086	+		DZA65_RS21615	0.34	-2.4
4,673,406	+		DZA65_RS21615	0.57	-0.8
4,673,409	+		DZA65_RS21615	0.58	+0.8
4,673,519	+		DZA65_RS21615	0.66	+1.2
4,673,519	+		DZA65_RS21615	0.66	-1.4
4,673,978	+				+0.3
4,673,979	-				-0.1
4,674,145	+				-0.5
4,674,145	+				+1.1
4,674,145	+				-2.9
4,674,187	+				+0.8
4,674,187	+				+0.4
4,674,187	+				-1.8
4,674,187	+				+0.1
4,674,188	-				+0.8
4,674,188	-				-0.5
4,674,188	-				-0.5
4,674,188	-				+0.6
4,674,188	-				-0.2
4,674,240	-				+0.1
4,674,245	+				-2.3
4,674,246	-				-0.5
4,674,265	-				+1.1
4,674,272	+				+0.6
4,674,273	-				+0.2
4,674,286	+				-0.4
4,674,305	+				+0.0
4,674,305	+				-0.2
4,674,306	-				-0.5
4,674,306	-				-0.6
4,674,349	+				+0.2
4,674,349	+				-1.8
4,674,350	-				-0.5
4,674,375	+				+0.2
4,674,406	-				+2.8
4,674,411	+				-0.4
4,674,411	+				+0.5
4,674,411	+				+0.6
4,674,411	+				-0.2
4,674,411	+				-1.2
4,674,411	+				-0.2
4,674,411	+				-0.9
4,674,411	+				-0.4
4,674,412	-				-1.0
4,674,412	-				+1.0
4,674,412	-				+0.0
4,674,635	+		DZA65_RS21620	0.18	+0.6
4,674,635	+		DZA65_RS21620	0.18	-1.2
4,674,635	+		DZA65_RS21620	0.18	+1.1
4,674,635	+		DZA65_RS21620	0.18	-0.1
4,674,635	+		DZA65_RS21620	0.18	+0.2
4,674,635	+		DZA65_RS21620	0.18	-1.9
4,674,635	+		DZA65_RS21620	0.18	-0.3
4,674,636	-		DZA65_RS21620	0.18	+0.0
4,674,636	-		DZA65_RS21620	0.18	-1.4
4,674,636	-		DZA65_RS21620	0.18	+0.0
4,674,636	-		DZA65_RS21620	0.18	+0.8
4,674,636	-		DZA65_RS21620	0.18	+0.2
4,674,639	+		DZA65_RS21620	0.19	-0.3
4,674,639	+		DZA65_RS21620	0.19	+1.2
4,674,639	+		DZA65_RS21620	0.19	-0.8
4,674,639	+		DZA65_RS21620	0.19	-1.2
4,674,640	-		DZA65_RS21620	0.19	+1.1
4,674,640	-		DZA65_RS21620	0.19	-1.6
4,674,640	-		DZA65_RS21620	0.19	+0.1
4,674,788	+		DZA65_RS21620	0.25	+0.2
4,674,788	+		DZA65_RS21620	0.25	-1.4
4,674,788	+		DZA65_RS21620	0.25	+0.8
4,674,789	-		DZA65_RS21620	0.25	+0.2
4,674,789	-		DZA65_RS21620	0.25	+0.5
4,674,789	-		DZA65_RS21620	0.25	-1.0
4,674,789	-				-0.2
4,674,875	-		DZA65_RS21620	0.29	+2.2
4,674,875	-		DZA65_RS21620	0.29	+1.1
4,674,898	+		DZA65_RS21620	0.30	-0.8
4,674,898	+		DZA65_RS21620	0.30	+2.8
4,674,898	+		DZA65_RS21620	0.30	-0.6
4,674,899	-		DZA65_RS21620	0.30	-0.5
4,674,899	-		DZA65_RS21620	0.30	-1.0
4,674,899	-		DZA65_RS21620	0.30	+0.1
4,674,899	-		DZA65_RS21620	0.30	-1.8
4,674,899	-		DZA65_RS21620	0.30	-0.0
4,674,899	-		DZA65_RS21620	0.30	-1.4
4,674,982	+		DZA65_RS21620	0.34	-0.2
4,674,982	+		DZA65_RS21620	0.34	-2.1
4,674,982	+		DZA65_RS21620	0.34	+0.2
4,674,982	+		DZA65_RS21620	0.34	+0.8
4,674,982	+		DZA65_RS21620	0.34	+0.2
4,674,983	-		DZA65_RS21620	0.34	-1.0
4,674,983	-		DZA65_RS21620	0.34	+0.8
4,674,983	-		DZA65_RS21620	0.34	+1.8
4,674,983	-		DZA65_RS21620	0.34	+0.5
4,674,983	-		DZA65_RS21620	0.34	-1.4
4,674,983	-		DZA65_RS21620	0.34	-0.1
4,674,984	+		DZA65_RS21620	0.34	-1.9
4,674,984	+		DZA65_RS21620	0.34	+0.2
4,674,984	+				+0.2
4,674,984	+		DZA65_RS21620	0.34	-0.9
4,674,984	+		DZA65_RS21620	0.34	-0.9
4,674,984	+				+0.8
4,674,984	+		DZA65_RS21620	0.34	-0.2
4,674,984	+		DZA65_RS21620	0.34	+0.0
4,674,984	+		DZA65_RS21620	0.34	-0.6
4,674,984	+		DZA65_RS21620	0.34	-0.8
4,674,984	+		DZA65_RS21620	0.34	-1.5
4,674,984	+		DZA65_RS21620	0.34	-0.1
4,674,984	+		DZA65_RS21620	0.34	+0.5
4,674,985	-		DZA65_RS21620	0.34	-1.0
4,674,985	-		DZA65_RS21620	0.34	+0.2
4,674,985	-		DZA65_RS21620	0.34	+0.8
4,674,985	-		DZA65_RS21620	0.34	-1.0
4,674,985	-		DZA65_RS21620	0.34	-1.0
4,674,985	-		DZA65_RS21620	0.34	-0.4
4,674,985	-		DZA65_RS21620	0.34	-0.5
4,674,985	-		DZA65_RS21620	0.34	+0.0
4,674,985	-		DZA65_RS21620	0.34	-0.2
4,674,985	-		DZA65_RS21620	0.34	-2.1
4,674,985	-		DZA65_RS21620	0.34	+0.0