Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS20980

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,535,344	-				-1.4
4,535,353	+				+1.3
4,535,353	+				+0.8
4,535,353	+				-0.2
4,535,353	+				-1.6
4,535,354	-				+0.1
4,535,354	-				-1.0
4,535,354	-				-0.8
4,535,354	-				+0.2
4,535,354	-				+0.8
4,535,381	+				-0.8
4,535,381	+				-1.2
4,535,382	-				-1.8
4,535,382	-				+0.6
4,535,382	-				-0.3
4,535,382	-				-0.1
4,535,382	-				+0.5
4,535,382	-				-0.3
4,535,382	-				-0.7
4,535,382	-				-0.3
4,535,382	-				-0.3
4,535,383	+				+1.3
4,535,383	+				-0.7
4,535,383	+				-0.4
4,535,383	+				-0.2
4,535,383	+				-1.0
4,535,383	+				-0.1
4,535,384	-				+2.1
4,535,384	-				+1.8
4,535,384	-				-0.1
4,535,384	-				-0.2
4,535,384	-				-0.8
4,535,384	-				+1.2
4,535,384	-				+0.1
4,535,384	-				-1.4
4,535,384	-				-0.0
4,535,384	-				+0.4
4,535,541	+				+1.0
4,535,541	+				-0.2
4,535,541	+				-1.2
4,535,542	-				-0.7
4,535,542	-				-0.5
4,535,552	+				-1.5
4,535,552	+				-0.4
4,535,553	-				+1.8
4,535,575	+				-1.2
4,535,575	+				-0.7
4,535,575	+				-0.7
4,535,576	-				+1.8
4,535,590	+				+1.8
4,535,591	-				+1.2
4,535,591	-				+1.0
4,535,591	-				-0.1
4,535,604	-				-1.2
4,535,646	+				+0.3
4,535,647	-				+0.4
4,535,647	-				-0.8
4,535,647	-				-0.3
4,535,647	-				-1.9
4,535,692	-				-1.4
4,535,698	+				-0.5
4,535,702	+				+1.3
4,535,702	+				-1.2
4,535,715	-				-0.6
4,535,722	-				-0.6
4,535,748	-				-0.6
4,535,748	-				+0.3
4,535,761	-				-0.2
4,535,789	+				+0.8
4,535,793	+				-1.0
4,535,793	+				-1.1
4,535,844	-				-0.5
4,535,872	-				-0.7
4,535,872	-				-1.2
4,535,882	+				-0.0
4,535,953	+				-0.2
4,535,954	-				+1.2
4,536,006	+				+2.1
4,536,054	-				+0.2
4,536,054	-				-1.2
4,536,057	+				-0.8
4,536,058	-				+0.0
4,536,105	+				+1.2
4,536,129	+				+0.3
4,536,135	-				-0.0
4,536,154	+				+0.2
4,536,170	-				-1.0
4,536,235	-				-3.0
4,536,235	-				-1.6
4,536,305	+				-1.6
4,536,352	-				-0.7
4,536,463	+				-0.9
4,536,489	+		DZA65_RS20980	0.11	-1.2
4,536,565	-		DZA65_RS20980	0.16	-0.9
4,536,619	+		DZA65_RS20980	0.20	-0.2
4,536,638	-		DZA65_RS20980	0.21	-0.3
4,536,638	-		DZA65_RS20980	0.21	-0.2
4,536,675	-		DZA65_RS20980	0.24	+0.6
4,536,675	-		DZA65_RS20980	0.24	+0.8
4,536,675	-		DZA65_RS20980	0.24	+0.8
4,536,676	+		DZA65_RS20980	0.24	+0.2
4,536,676	+		DZA65_RS20980	0.24	-0.0
4,536,752	+		DZA65_RS20980	0.29	-2.1
4,536,752	+		DZA65_RS20980	0.29	+0.6
4,536,752	+		DZA65_RS20980	0.29	+0.3
4,536,752	+		DZA65_RS20980	0.29	-0.0
4,536,752	+		DZA65_RS20980	0.29	-1.0
4,536,752	+		DZA65_RS20980	0.29	+0.4
4,536,752	+		DZA65_RS20980	0.29	+0.9
4,536,753	-		DZA65_RS20980	0.29	-0.6
4,536,753	-		DZA65_RS20980	0.29	+1.2
4,536,753	-		DZA65_RS20980	0.29	-0.6
4,536,753	-		DZA65_RS20980	0.29	-0.6
4,536,753	-		DZA65_RS20980	0.29	-0.0
4,536,753	-		DZA65_RS20980	0.29	-1.6
4,536,753	-		DZA65_RS20980	0.29	+0.8
4,536,753	-		DZA65_RS20980	0.29	-2.0
4,536,756	+		DZA65_RS20980	0.29	+0.2
4,536,757	-		DZA65_RS20980	0.29	-0.1
4,536,853	+		DZA65_RS20980	0.36	+0.9
4,536,900	-		DZA65_RS20980	0.39	+0.8
4,536,941	-		DZA65_RS20980	0.42	+0.4
4,536,961	+		DZA65_RS20980	0.43	-0.4
4,537,026	+		DZA65_RS20980	0.48	-0.3
4,537,073	+		DZA65_RS20980	0.51	-1.8
4,537,073	+		DZA65_RS20980	0.51	+0.2
4,537,074	-		DZA65_RS20980	0.51	-2.1
4,537,090	+		DZA65_RS20980	0.52	-0.0
4,537,090	+		DZA65_RS20980	0.52	+0.3
4,537,180	+		DZA65_RS20980	0.58	-0.1
4,537,180	+		DZA65_RS20980	0.58	-0.7
4,537,293	+		DZA65_RS20980	0.66	+0.2
4,537,295	+		DZA65_RS20980	0.66	-1.4
4,537,298	+		DZA65_RS20980	0.66	-0.4
4,537,299	-		DZA65_RS20980	0.66	-0.5
4,537,357	+		DZA65_RS20980	0.70	-0.8
4,537,366	-		DZA65_RS20980	0.71	-0.1
4,537,366	-		DZA65_RS20980	0.71	-1.6
4,537,366	-		DZA65_RS20980	0.71	-0.0
4,537,367	+		DZA65_RS20980	0.71	-0.7
4,537,368	-		DZA65_RS20980	0.71	-2.0
4,537,369	+		DZA65_RS20980	0.71	-0.7
4,537,418	+		DZA65_RS20980	0.74	+0.8
4,537,423	+		DZA65_RS20980	0.74	+0.8
4,537,468	+		DZA65_RS20980	0.77	-0.2
4,537,552	+		DZA65_RS20980	0.83	-1.6
4,537,553	-		DZA65_RS20980	0.83	+0.2
4,537,554	+		DZA65_RS20980	0.83	+0.4
4,537,554	+		DZA65_RS20980	0.83	-1.0
4,537,554	+		DZA65_RS20980	0.83	-0.8
4,537,554	+		DZA65_RS20980	0.83	+0.1
4,537,554	+		DZA65_RS20980	0.83	-1.2
4,537,555	-		DZA65_RS20980	0.83	+0.1
4,537,555	-		DZA65_RS20980	0.83	+0.5
4,537,596	+		DZA65_RS20980	0.86	+1.0
4,537,597	-		DZA65_RS20980	0.86	-0.2
4,537,597	-		DZA65_RS20980	0.86	-2.0
4,537,597	-		DZA65_RS20980	0.86	+0.2
4,537,597	-		DZA65_RS20980	0.86	+0.8
4,537,597	-		DZA65_RS20980	0.86	+1.2
4,537,597	-		DZA65_RS20980	0.86	-1.0
4,537,622	-		DZA65_RS20980	0.88	-0.8
4,537,638	-		DZA65_RS20980	0.89	-0.6
4,537,638	-		DZA65_RS20980	0.89	+2.1
4,537,649	+		DZA65_RS20980	0.90	+2.0
4,537,649	+		DZA65_RS20980	0.90	+0.1
4,537,649	+		DZA65_RS20980	0.90	-0.2
4,537,650	-		DZA65_RS20980	0.90	-0.9
4,537,650	-		DZA65_RS20980	0.90	-0.7
4,537,651	+		DZA65_RS20980	0.90	+0.4
4,537,651	+		DZA65_RS20980	0.90	-1.0
4,537,651	+		DZA65_RS20980	0.90	+0.2
4,537,651	+		DZA65_RS20980	0.90	-1.0
4,537,652	-		DZA65_RS20980	0.90	+1.1
4,537,657	+				-0.7
4,537,657	+				-0.4
4,537,657	+				-0.0
4,537,657	+				-0.4
4,537,657	+				-1.2
4,537,657	+				+1.3
4,537,657	+				+0.2
4,537,657	+				-0.2
4,537,657	+				+0.1
4,537,658	-				+1.2
4,537,658	-				+0.7
4,537,658	-				-0.2
4,537,658	-				-0.6
4,537,658	-				-0.5
4,537,658	-				-0.8
4,537,658	-				-0.0
4,537,658	-				-1.4
4,537,658	-				-0.6
4,537,658	-				-1.8
4,537,666	+				-0.8
4,537,666	+				+1.2
4,537,666	+				-0.5
4,537,666	+				-0.2
4,537,667	-				+0.8
4,537,667	-				-0.4
4,537,667	-				+0.4
4,537,667	-				-1.0
4,537,667	-				-0.0
4,537,745	+				+1.2
4,537,745	+				+0.2
4,537,745	+				+0.2
4,537,746	-				+0.3
4,537,746	-				-1.0
4,537,763	-				-1.4
4,537,763	-				+1.2
4,537,763	-				-1.1
4,537,782	+				-0.4
4,537,782	+				-0.7
4,537,786	+				+0.6
4,537,786	+				+0.8
4,537,787	-				-1.8
4,537,787	-				-1.8
4,537,787	-				-0.5
4,537,799	+				-0.7
4,537,799	+				-0.1
4,537,800	-				+1.0
4,537,804	+				+0.8
4,537,804	+				-0.6
4,537,804	+				+0.8
4,537,804	+				-0.2
4,537,804	+				+0.2
4,537,804	+				-0.6
4,537,804	+				-0.4
4,537,804	+				-0.7
4,537,805	-				-0.4
4,537,805	-				-0.2
4,537,805	-				+0.6
4,537,805	-				-0.0
4,537,805	-				+2.0
4,537,805	-				-0.5
4,537,805	-				-0.5
4,537,805	-				+0.2
4,537,805	-				+0.1
4,537,805	-				-0.6
4,537,805	-				-1.2
4,537,819	+				+2.8
4,537,820	-				+0.2
4,537,828	+				+0.5
4,537,829	-				+0.4
4,537,927	+		DZA65_RS20985	0.14	-1.2
4,537,927	+		DZA65_RS20985	0.14	-0.8
4,537,927	+		DZA65_RS20985	0.14	-0.5
4,537,927	+		DZA65_RS20985	0.14	-0.2
4,537,927	+		DZA65_RS20985	0.14	+0.5
4,537,928	-		DZA65_RS20985	0.14	-0.9
4,537,928	-		DZA65_RS20985	0.14	-0.8
4,537,928	-		DZA65_RS20985	0.14	+0.4
4,537,928	-		DZA65_RS20985	0.14	-0.6
4,537,929	+		DZA65_RS20985	0.15	-0.1
4,537,929	+		DZA65_RS20985	0.15	+0.1
4,537,929	+		DZA65_RS20985	0.15	-0.1
4,537,929	+		DZA65_RS20985	0.15	-1.2
4,537,929	+		DZA65_RS20985	0.15	+0.8
4,537,929	+		DZA65_RS20985	0.15	-1.2
4,537,929	+		DZA65_RS20985	0.15	+0.1
4,537,929	+		DZA65_RS20985	0.15	-0.5
4,537,929	+		DZA65_RS20985	0.15	-1.2
4,537,929	+		DZA65_RS20985	0.15	+0.6
4,537,929	+		DZA65_RS20985	0.15	-1.2
4,537,930	-		DZA65_RS20985	0.15	+0.8
4,537,930	-		DZA65_RS20985	0.15	+0.6
4,537,930	-		DZA65_RS20985	0.15	-2.1
4,537,947	+		DZA65_RS20985	0.17	+0.8
4,537,948	-		DZA65_RS20985	0.17	-2.0
4,537,968	+		DZA65_RS20985	0.20	+1.3
4,537,969	-		DZA65_RS20985	0.20	-0.6
4,537,969	-		DZA65_RS20985	0.20	+1.1
4,537,993	+		DZA65_RS20985	0.23	+0.2
4,537,993	+		DZA65_RS20985	0.23	+1.4
4,537,993	+		DZA65_RS20985	0.23	+0.4
4,537,993	+		DZA65_RS20985	0.23	+0.6
4,537,993	+				+0.8
4,537,994	-		DZA65_RS20985	0.23	-0.7
4,537,994	-		DZA65_RS20985	0.23	+1.3
4,537,994	-		DZA65_RS20985	0.23	+0.2
4,537,994	-		DZA65_RS20985	0.23	+0.3
4,537,997	+		DZA65_RS20985	0.24	+1.0
4,537,997	+		DZA65_RS20985	0.24	+0.3
4,537,997	+		DZA65_RS20985	0.24	+0.8
4,537,997	+		DZA65_RS20985	0.24	-0.1
4,537,997	+		DZA65_RS20985	0.24	+0.0
4,537,997	+		DZA65_RS20985	0.24	-0.9
4,537,997	+		DZA65_RS20985	0.24	-0.1
4,537,998	-		DZA65_RS20985	0.24	-0.2
4,537,998	-		DZA65_RS20985	0.24	+0.2
4,537,998	-		DZA65_RS20985	0.24	-1.2
4,537,998	-		DZA65_RS20985	0.24	-0.2
4,537,998	-		DZA65_RS20985	0.24	+0.5
4,537,998	-		DZA65_RS20985	0.24	+0.2
4,537,998	-		DZA65_RS20985	0.24	+0.5
4,537,998	-		DZA65_RS20985	0.24	-0.8
4,538,000	+		DZA65_RS20985	0.24	+1.0
4,538,000	+		DZA65_RS20985	0.24	-0.8
4,538,000	+		DZA65_RS20985	0.24	+0.8
4,538,001	-		DZA65_RS20985	0.24	-1.0
4,538,010	+		DZA65_RS20985	0.25	-2.1
4,538,011	-		DZA65_RS20985	0.26	-0.3
4,538,044	+		DZA65_RS20985	0.30	-0.2
4,538,044	+		DZA65_RS20985	0.30	+0.3
4,538,044	+		DZA65_RS20985	0.30	-2.3
4,538,044	+		DZA65_RS20985	0.30	-0.1
4,538,045	-		DZA65_RS20985	0.30	-0.0
4,538,046	+		DZA65_RS20985	0.30	-0.9
4,538,075	-		DZA65_RS20985	0.34	-0.8
4,538,082	+		DZA65_RS20985	0.35	-0.8
4,538,082	+		DZA65_RS20985	0.35	-0.5
4,538,082	+		DZA65_RS20985	0.35	-1.3
4,538,083	-				+0.8
4,538,083	-		DZA65_RS20985	0.35	-0.7
4,538,127	+		DZA65_RS20985	0.41	-0.2
4,538,127	+				+2.2
4,538,128	-		DZA65_RS20985	0.41	-1.6
4,538,128	-		DZA65_RS20985	0.41	+1.8
4,538,128	-		DZA65_RS20985	0.41	-0.4
4,538,131	+		DZA65_RS20985	0.42	-1.2
4,538,131	+		DZA65_RS20985	0.42	+0.2
4,538,131	+		DZA65_RS20985	0.42	-0.9
4,538,131	+		DZA65_RS20985	0.42	-0.4
4,538,131	+		DZA65_RS20985	0.42	+0.2
4,538,131	+		DZA65_RS20985	0.42	-0.0
4,538,131	+		DZA65_RS20985	0.42	-0.0
4,538,132	-		DZA65_RS20985	0.42	+0.3
4,538,132	-		DZA65_RS20985	0.42	-0.2
4,538,132	-		DZA65_RS20985	0.42	+1.3
4,538,132	-		DZA65_RS20985	0.42	+2.5
4,538,132	-		DZA65_RS20985	0.42	-1.3
4,538,132	-		DZA65_RS20985	0.42	-1.2
4,538,133	-		DZA65_RS20985	0.42	-0.9
4,538,160	-		DZA65_RS20985	0.46	-0.8
4,538,160	-		DZA65_RS20985	0.46	-0.8
4,538,192	-		DZA65_RS20985	0.50	-0.7
4,538,202	+		DZA65_RS20985	0.51	-0.2
4,538,224	+		DZA65_RS20985	0.54	-0.6
4,538,224	+		DZA65_RS20985	0.54	-0.6
4,538,288	-		DZA65_RS20985	0.63	+1.2
4,538,288	-		DZA65_RS20985	0.63	-1.7
4,538,308	+		DZA65_RS20985	0.65	-0.7
4,538,309	-		DZA65_RS20985	0.65	-1.2
4,538,346	+		DZA65_RS20985	0.70	-2.2
4,538,346	+		DZA65_RS20985	0.70	-0.8
4,538,347	-		DZA65_RS20985	0.71	+0.4
4,538,362	-		DZA65_RS20985	0.73	-0.0
4,538,405	-		DZA65_RS20985	0.78	-0.3
4,538,417	+		DZA65_RS20985	0.80	-0.1
4,538,417	+				+1.3
4,538,417	+		DZA65_RS20985	0.80	+1.6
4,538,417	+		DZA65_RS20985	0.80	-1.8
4,538,417	+		DZA65_RS20985	0.80	+0.4
4,538,417	+		DZA65_RS20985	0.80	+1.6
4,538,417	+		DZA65_RS20985	0.80	-0.4
4,538,417	+		DZA65_RS20985	0.80	-0.2
4,538,417	+		DZA65_RS20985	0.80	+0.8
4,538,417	+		DZA65_RS20985	0.80	+0.3
4,538,417	+		DZA65_RS20985	0.80	-0.4
4,538,417	+		DZA65_RS20985	0.80	-0.6
4,538,417	+		DZA65_RS20985	0.80	-0.8
4,538,417	+		DZA65_RS20985	0.80	+0.4
4,538,417	+		DZA65_RS20985	0.80	-0.8
4,538,417	+		DZA65_RS20985	0.80	+0.6
4,538,417	+		DZA65_RS20985	0.80	-0.0
4,538,417	+		DZA65_RS20985	0.80	-0.5
4,538,417	+		DZA65_RS20985	0.80	-0.6
4,538,417	+		DZA65_RS20985	0.80	-0.5
4,538,417	+		DZA65_RS20985	0.80	+0.8
4,538,417	+		DZA65_RS20985	0.80	+0.5
4,538,417	+		DZA65_RS20985	0.80	+0.1
4,538,418	-		DZA65_RS20985	0.80	+1.3
4,538,418	-		DZA65_RS20985	0.80	-1.2
4,538,418	-		DZA65_RS20985	0.80	-0.0
4,538,418	-		DZA65_RS20985	0.80	-0.1
4,538,418	-		DZA65_RS20985	0.80	-1.4
4,538,418	-		DZA65_RS20985	0.80	-1.2
4,538,418	-		DZA65_RS20985	0.80	+0.2
4,538,418	-		DZA65_RS20985	0.80	+0.0
4,538,418	-		DZA65_RS20985	0.80	-0.4
4,538,418	-		DZA65_RS20985	0.80	+0.3
4,538,418	-		DZA65_RS20985	0.80	+0.8
4,538,418	-		DZA65_RS20985	0.80	-0.6
4,538,418	-		DZA65_RS20985	0.80	+0.8
4,538,418	-		DZA65_RS20985	0.80	-1.2
4,538,418	-		DZA65_RS20985	0.80	+1.0
4,538,541	+				-0.3
4,538,541	+				-1.4
4,538,541	+				+0.5
4,538,548	+				+0.2
4,538,548	+				-0.7
4,538,549	-				+1.5
4,538,560	+				-1.0
4,538,560	+				+0.4
4,538,560	+				+0.4
4,538,560	+				+0.3
4,538,560	+				+0.8
4,538,560	+				+0.4
4,538,560	+				-1.0
4,538,560	+				-1.6
4,538,561	-				-0.6
4,538,561	-				-0.1
4,538,582	+				+0.8
4,538,582	+				+0.3
4,538,583	-				-0.2