Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS20100 and DZA65_RS20105 are separated by 83 nucleotides DZA65_RS20105 and DZA65_RS20110 are separated by 3 nucleotides
DZA65_RS20100: DZA65_RS20100 - chlorinating enzyme, at 4,355,409 to 4,356,368
_RS20100
DZA65_RS20105: DZA65_RS20105 - acyl carrier protein, at 4,356,452 to 4,356,718
_RS20105
DZA65_RS20110: DZA65_RS20110 - amino acid adenylation domain-containing protein, at 4,356,722 to 4,358,257
_RS20110
Position (kb) 4356
4357 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4355.453 kb on + strand at 4355.453 kb on + strand at 4355.454 kb on - strand at 4355.454 kb on - strand at 4355.524 kb on + strand, within DZA65_RS20100 at 4355.524 kb on + strand, within DZA65_RS20100 at 4355.524 kb on + strand, within DZA65_RS20100 at 4355.524 kb on + strand, within DZA65_RS20100 at 4355.524 kb on + strand, within DZA65_RS20100 at 4355.524 kb on + strand, within DZA65_RS20100 at 4355.524 kb on + strand at 4355.524 kb on + strand, within DZA65_RS20100 at 4355.525 kb on - strand, within DZA65_RS20100 at 4355.525 kb on - strand, within DZA65_RS20100 at 4355.525 kb on - strand, within DZA65_RS20100 at 4355.525 kb on - strand, within DZA65_RS20100 at 4355.525 kb on - strand, within DZA65_RS20100 at 4355.525 kb on - strand, within DZA65_RS20100 at 4355.525 kb on - strand, within DZA65_RS20100 at 4355.525 kb on - strand, within DZA65_RS20100 at 4355.525 kb on - strand, within DZA65_RS20100 at 4355.528 kb on + strand, within DZA65_RS20100 at 4355.528 kb on + strand, within DZA65_RS20100 at 4355.528 kb on + strand, within DZA65_RS20100 at 4355.528 kb on + strand, within DZA65_RS20100 at 4355.528 kb on + strand, within DZA65_RS20100 at 4355.529 kb on - strand, within DZA65_RS20100 at 4355.529 kb on - strand, within DZA65_RS20100 at 4355.529 kb on - strand, within DZA65_RS20100 at 4355.529 kb on - strand, within DZA65_RS20100 at 4355.529 kb on - strand, within DZA65_RS20100 at 4355.529 kb on - strand, within DZA65_RS20100 at 4355.551 kb on + strand, within DZA65_RS20100 at 4355.551 kb on + strand, within DZA65_RS20100 at 4355.551 kb on + strand, within DZA65_RS20100 at 4355.552 kb on - strand, within DZA65_RS20100 at 4355.578 kb on + strand, within DZA65_RS20100 at 4355.578 kb on + strand, within DZA65_RS20100 at 4355.578 kb on + strand, within DZA65_RS20100 at 4355.579 kb on - strand, within DZA65_RS20100 at 4355.579 kb on - strand, within DZA65_RS20100 at 4355.582 kb on + strand, within DZA65_RS20100 at 4355.602 kb on + strand, within DZA65_RS20100 at 4355.603 kb on - strand, within DZA65_RS20100 at 4355.603 kb on - strand, within DZA65_RS20100 at 4355.650 kb on + strand, within DZA65_RS20100 at 4355.650 kb on + strand, within DZA65_RS20100 at 4355.749 kb on - strand, within DZA65_RS20100 at 4355.754 kb on + strand, within DZA65_RS20100 at 4355.754 kb on + strand, within DZA65_RS20100 at 4355.755 kb on - strand, within DZA65_RS20100 at 4355.755 kb on - strand, within DZA65_RS20100 at 4355.764 kb on + strand, within DZA65_RS20100 at 4355.814 kb on - strand, within DZA65_RS20100 at 4355.814 kb on - strand, within DZA65_RS20100 at 4355.814 kb on - strand, within DZA65_RS20100 at 4355.830 kb on + strand, within DZA65_RS20100 at 4355.830 kb on + strand, within DZA65_RS20100 at 4355.831 kb on - strand, within DZA65_RS20100 at 4355.831 kb on - strand, within DZA65_RS20100 at 4355.831 kb on - strand, within DZA65_RS20100 at 4355.854 kb on + strand, within DZA65_RS20100 at 4355.854 kb on + strand, within DZA65_RS20100 at 4355.854 kb on + strand, within DZA65_RS20100 at 4355.854 kb on + strand, within DZA65_RS20100 at 4355.855 kb on - strand, within DZA65_RS20100 at 4355.855 kb on - strand, within DZA65_RS20100 at 4355.855 kb on - strand, within DZA65_RS20100 at 4355.883 kb on - strand, within DZA65_RS20100 at 4355.883 kb on - strand, within DZA65_RS20100 at 4355.919 kb on - strand, within DZA65_RS20100 at 4355.919 kb on - strand, within DZA65_RS20100 at 4355.919 kb on - strand, within DZA65_RS20100 at 4355.919 kb on - strand, within DZA65_RS20100 at 4355.979 kb on + strand, within DZA65_RS20100 at 4355.980 kb on - strand, within DZA65_RS20100 at 4356.123 kb on - strand, within DZA65_RS20100 at 4356.131 kb on + strand, within DZA65_RS20100 at 4356.176 kb on - strand, within DZA65_RS20100 at 4356.176 kb on - strand, within DZA65_RS20100 at 4356.176 kb on - strand, within DZA65_RS20100 at 4356.179 kb on + strand, within DZA65_RS20100 at 4356.188 kb on + strand, within DZA65_RS20100 at 4356.258 kb on - strand, within DZA65_RS20100 at 4356.289 kb on + strand at 4356.306 kb on + strand at 4356.308 kb on + strand at 4356.309 kb on - strand at 4356.309 kb on - strand at 4356.309 kb on - strand at 4356.311 kb on - strand at 4356.311 kb on - strand at 4356.329 kb on + strand at 4356.329 kb on + strand at 4356.330 kb on - strand at 4356.334 kb on - strand at 4356.393 kb on + strand at 4356.414 kb on - strand at 4356.480 kb on - strand, within DZA65_RS20105 at 4356.492 kb on + strand, within DZA65_RS20105 at 4356.492 kb on + strand, within DZA65_RS20105 at 4356.492 kb on + strand, within DZA65_RS20105 at 4356.493 kb on - strand, within DZA65_RS20105 at 4356.493 kb on - strand, within DZA65_RS20105 at 4356.589 kb on + strand, within DZA65_RS20105 at 4356.614 kb on + strand, within DZA65_RS20105 at 4356.814 kb on + strand at 4356.814 kb on + strand at 4356.814 kb on + strand at 4356.814 kb on + strand at 4356.814 kb on + strand at 4356.814 kb on + strand at 4356.814 kb on + strand at 4356.814 kb on + strand at 4356.814 kb on + strand at 4356.815 kb on - strand at 4356.815 kb on - strand at 4356.816 kb on + strand at 4356.816 kb on + strand at 4356.816 kb on + strand at 4356.816 kb on + strand at 4356.816 kb on + strand at 4356.816 kb on + strand at 4356.817 kb on - strand at 4356.817 kb on - strand at 4356.817 kb on - strand at 4356.817 kb on - strand at 4356.817 kb on - strand at 4356.818 kb on + strand at 4356.860 kb on + strand at 4356.860 kb on + strand at 4356.860 kb on + strand at 4356.861 kb on - strand at 4356.920 kb on + strand, within DZA65_RS20110 at 4356.920 kb on + strand, within DZA65_RS20110 at 4356.920 kb on + strand, within DZA65_RS20110 at 4356.920 kb on + strand, within DZA65_RS20110 at 4356.920 kb on + strand, within DZA65_RS20110 at 4356.920 kb on + strand, within DZA65_RS20110 at 4356.920 kb on + strand, within DZA65_RS20110 at 4356.920 kb on + strand, within DZA65_RS20110 at 4356.920 kb on + strand, within DZA65_RS20110 at 4356.920 kb on + strand, within DZA65_RS20110 at 4356.920 kb on + strand, within DZA65_RS20110 at 4356.920 kb on + strand, within DZA65_RS20110 at 4356.920 kb on + strand, within DZA65_RS20110 at 4356.920 kb on + strand, within DZA65_RS20110 at 4356.920 kb on + strand, within DZA65_RS20110 at 4356.921 kb on - strand at 4356.921 kb on - strand, within DZA65_RS20110 at 4356.921 kb on - strand, within DZA65_RS20110 at 4356.921 kb on - strand, within DZA65_RS20110 at 4356.921 kb on - strand, within DZA65_RS20110 at 4356.921 kb on - strand, within DZA65_RS20110 at 4356.921 kb on - strand, within DZA65_RS20110 at 4356.921 kb on - strand, within DZA65_RS20110 at 4356.921 kb on - strand, within DZA65_RS20110 at 4356.921 kb on - strand, within DZA65_RS20110 at 4356.950 kb on - strand, within DZA65_RS20110 at 4357.047 kb on + strand, within DZA65_RS20110 at 4357.048 kb on - strand, within DZA65_RS20110 at 4357.051 kb on + strand, within DZA65_RS20110 at 4357.051 kb on + strand, within DZA65_RS20110 at 4357.051 kb on + strand, within DZA65_RS20110 at 4357.051 kb on + strand, within DZA65_RS20110 at 4357.052 kb on - strand, within DZA65_RS20110 at 4357.052 kb on - strand, within DZA65_RS20110 at 4357.052 kb on - strand, within DZA65_RS20110 at 4357.052 kb on - strand, within DZA65_RS20110 at 4357.052 kb on - strand, within DZA65_RS20110 at 4357.052 kb on - strand, within DZA65_RS20110 at 4357.052 kb on - strand, within DZA65_RS20110 at 4357.052 kb on - strand, within DZA65_RS20110 at 4357.052 kb on - strand, within DZA65_RS20110 at 4357.076 kb on + strand, within DZA65_RS20110 at 4357.076 kb on + strand, within DZA65_RS20110 at 4357.077 kb on - strand, within DZA65_RS20110 at 4357.077 kb on - strand, within DZA65_RS20110 at 4357.079 kb on + strand, within DZA65_RS20110 at 4357.096 kb on - strand, within DZA65_RS20110 at 4357.098 kb on + strand, within DZA65_RS20110 at 4357.133 kb on - strand, within DZA65_RS20110 at 4357.244 kb on - strand, within DZA65_RS20110 at 4357.252 kb on - strand at 4357.356 kb on + strand, within DZA65_RS20110 at 4357.356 kb on + strand, within DZA65_RS20110 at 4357.357 kb on - strand, within DZA65_RS20110 at 4357.357 kb on - strand, within DZA65_RS20110 at 4357.360 kb on + strand, within DZA65_RS20110 at 4357.360 kb on + strand, within DZA65_RS20110 at 4357.360 kb on + strand, within DZA65_RS20110 at 4357.361 kb on - strand, within DZA65_RS20110 at 4357.361 kb on - strand, within DZA65_RS20110 at 4357.447 kb on + strand, within DZA65_RS20110 at 4357.529 kb on + strand, within DZA65_RS20110 at 4357.577 kb on + strand, within DZA65_RS20110 at 4357.635 kb on - strand, within DZA65_RS20110 at 4357.635 kb on - strand, within DZA65_RS20110 at 4357.663 kb on - strand, within DZA65_RS20110 at 4357.671 kb on + strand, within DZA65_RS20110 at 4357.672 kb on - strand, within DZA65_RS20110 at 4357.706 kb on + strand, within DZA65_RS20110 at 4357.707 kb on - strand, within DZA65_RS20110 at 4357.707 kb on - strand, within DZA65_RS20110
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 4,355,453 + -0.9 4,355,453 + -0.8 4,355,454 - -0.9 4,355,454 - +0.4 4,355,524 + DZA65_RS20100 0.12 +0.3 4,355,524 + DZA65_RS20100 0.12 -1.4 4,355,524 + DZA65_RS20100 0.12 -0.1 4,355,524 + DZA65_RS20100 0.12 -1.0 4,355,524 + DZA65_RS20100 0.12 +0.0 4,355,524 + DZA65_RS20100 0.12 +0.7 4,355,524 + +0.1 4,355,524 + DZA65_RS20100 0.12 -0.8 4,355,525 - DZA65_RS20100 0.12 -0.3 4,355,525 - DZA65_RS20100 0.12 -1.3 4,355,525 - DZA65_RS20100 0.12 -0.0 4,355,525 - DZA65_RS20100 0.12 -0.6 4,355,525 - DZA65_RS20100 0.12 -0.0 4,355,525 - DZA65_RS20100 0.12 -2.0 4,355,525 - DZA65_RS20100 0.12 +0.5 4,355,525 - DZA65_RS20100 0.12 +1.7 4,355,525 - DZA65_RS20100 0.12 -0.5 4,355,528 + DZA65_RS20100 0.12 -0.0 4,355,528 + DZA65_RS20100 0.12 +0.4 4,355,528 + DZA65_RS20100 0.12 +0.1 4,355,528 + DZA65_RS20100 0.12 +0.6 4,355,528 + DZA65_RS20100 0.12 +0.7 4,355,529 - DZA65_RS20100 0.12 +0.5 4,355,529 - DZA65_RS20100 0.12 +0.6 4,355,529 - DZA65_RS20100 0.12 +0.8 4,355,529 - DZA65_RS20100 0.12 -2.0 4,355,529 - DZA65_RS20100 0.12 +0.2 4,355,529 - DZA65_RS20100 0.12 +2.1 4,355,551 + DZA65_RS20100 0.15 +0.3 4,355,551 + DZA65_RS20100 0.15 -0.3 4,355,551 + DZA65_RS20100 0.15 -1.4 4,355,552 - DZA65_RS20100 0.15 -2.1 4,355,578 + DZA65_RS20100 0.18 -0.6 4,355,578 + DZA65_RS20100 0.18 +0.4 4,355,578 + DZA65_RS20100 0.18 -0.8 4,355,579 - DZA65_RS20100 0.18 -0.8 4,355,579 - DZA65_RS20100 0.18 +0.1 4,355,582 + DZA65_RS20100 0.18 +0.7 4,355,602 + DZA65_RS20100 0.20 -0.5 4,355,603 - DZA65_RS20100 0.20 -0.6 4,355,603 - DZA65_RS20100 0.20 +0.7 4,355,650 + DZA65_RS20100 0.25 -0.3 4,355,650 + DZA65_RS20100 0.25 -0.6 4,355,749 - DZA65_RS20100 0.35 -0.6 4,355,754 + DZA65_RS20100 0.36 +1.4 4,355,754 + DZA65_RS20100 0.36 -0.9 4,355,755 - DZA65_RS20100 0.36 -0.8 4,355,755 - DZA65_RS20100 0.36 +0.5 4,355,764 + DZA65_RS20100 0.37 +0.2 4,355,814 - DZA65_RS20100 0.42 +0.1 4,355,814 - DZA65_RS20100 0.42 +0.4 4,355,814 - DZA65_RS20100 0.42 -1.2 4,355,830 + DZA65_RS20100 0.44 +0.1 4,355,830 + DZA65_RS20100 0.44 -1.1 4,355,831 - DZA65_RS20100 0.44 +0.2 4,355,831 - DZA65_RS20100 0.44 -0.5 4,355,831 - DZA65_RS20100 0.44 -0.2 4,355,854 + DZA65_RS20100 0.46 -1.5 4,355,854 + DZA65_RS20100 0.46 -0.2 4,355,854 + DZA65_RS20100 0.46 -0.5 4,355,854 + DZA65_RS20100 0.46 -1.1 4,355,855 - DZA65_RS20100 0.46 -2.4 4,355,855 - DZA65_RS20100 0.46 +0.5 4,355,855 - DZA65_RS20100 0.46 -0.6 4,355,883 - DZA65_RS20100 0.49 +0.1 4,355,883 - DZA65_RS20100 0.49 +0.4 4,355,919 - DZA65_RS20100 0.53 -0.3 4,355,919 - DZA65_RS20100 0.53 -0.5 4,355,919 - DZA65_RS20100 0.53 -1.1 4,355,919 - DZA65_RS20100 0.53 -0.4 4,355,979 + DZA65_RS20100 0.59 -2.3 4,355,980 - DZA65_RS20100 0.59 -0.2 4,356,123 - DZA65_RS20100 0.74 -1.9 4,356,131 + DZA65_RS20100 0.75 +0.7 4,356,176 - DZA65_RS20100 0.80 -0.5 4,356,176 - DZA65_RS20100 0.80 -1.1 4,356,176 - DZA65_RS20100 0.80 -0.4 4,356,179 + DZA65_RS20100 0.80 -1.0 4,356,188 + DZA65_RS20100 0.81 -1.1 4,356,258 - DZA65_RS20100 0.88 -1.3 4,356,289 + +1.3 4,356,306 + -0.1 4,356,308 + -2.2 4,356,309 - -0.9 4,356,309 - +0.1 4,356,309 - -1.5 4,356,311 - -0.4 4,356,311 - -0.3 4,356,329 + +1.7 4,356,329 + -0.3 4,356,330 - -0.3 4,356,334 - +0.9 4,356,393 + -0.1 4,356,414 - -0.8 4,356,480 - DZA65_RS20105 0.10 -0.6 4,356,492 + DZA65_RS20105 0.15 +0.4 4,356,492 + DZA65_RS20105 0.15 +0.7 4,356,492 + DZA65_RS20105 0.15 -0.3 4,356,493 - DZA65_RS20105 0.15 -1.1 4,356,493 - DZA65_RS20105 0.15 +0.7 4,356,589 + DZA65_RS20105 0.51 +0.6 4,356,614 + DZA65_RS20105 0.61 +0.1 4,356,814 + -1.5 4,356,814 + -1.5 4,356,814 + +0.1 4,356,814 + +1.3 4,356,814 + +1.1 4,356,814 + -1.1 4,356,814 + +0.2 4,356,814 + +1.3 4,356,814 + -0.3 4,356,815 - -1.0 4,356,815 - -0.9 4,356,816 + -1.4 4,356,816 + -0.6 4,356,816 + -1.2 4,356,816 + -0.6 4,356,816 + -0.6 4,356,816 + -0.5 4,356,817 - -1.3 4,356,817 - -0.3 4,356,817 - -0.2 4,356,817 - +0.9 4,356,817 - +0.7 4,356,818 + -1.4 4,356,860 + -1.0 4,356,860 + -0.9 4,356,860 + +0.7 4,356,861 - +0.6 4,356,920 + DZA65_RS20110 0.13 -0.3 4,356,920 + DZA65_RS20110 0.13 +1.7 4,356,920 + DZA65_RS20110 0.13 +0.0 4,356,920 + DZA65_RS20110 0.13 -0.6 4,356,920 + DZA65_RS20110 0.13 +0.5 4,356,920 + DZA65_RS20110 0.13 +0.5 4,356,920 + DZA65_RS20110 0.13 +1.3 4,356,920 + DZA65_RS20110 0.13 -0.3 4,356,920 + DZA65_RS20110 0.13 -0.7 4,356,920 + DZA65_RS20110 0.13 -0.3 4,356,920 + DZA65_RS20110 0.13 -0.6 4,356,920 + DZA65_RS20110 0.13 +0.9 4,356,920 + DZA65_RS20110 0.13 -1.6 4,356,920 + DZA65_RS20110 0.13 +0.7 4,356,920 + DZA65_RS20110 0.13 -0.8 4,356,921 - +0.4 4,356,921 - DZA65_RS20110 0.13 -1.9 4,356,921 - DZA65_RS20110 0.13 +0.9 4,356,921 - DZA65_RS20110 0.13 +0.4 4,356,921 - DZA65_RS20110 0.13 -1.4 4,356,921 - DZA65_RS20110 0.13 +1.0 4,356,921 - DZA65_RS20110 0.13 -0.6 4,356,921 - DZA65_RS20110 0.13 -0.6 4,356,921 - DZA65_RS20110 0.13 -0.1 4,356,921 - DZA65_RS20110 0.13 -0.3 4,356,950 - DZA65_RS20110 0.15 -0.5 4,357,047 + DZA65_RS20110 0.21 +0.6 4,357,048 - DZA65_RS20110 0.21 +0.1 4,357,051 + DZA65_RS20110 0.21 +0.9 4,357,051 + DZA65_RS20110 0.21 -0.5 4,357,051 + DZA65_RS20110 0.21 +0.1 4,357,051 + DZA65_RS20110 0.21 +1.1 4,357,052 - DZA65_RS20110 0.21 -0.6 4,357,052 - DZA65_RS20110 0.21 +0.5 4,357,052 - DZA65_RS20110 0.21 -0.2 4,357,052 - DZA65_RS20110 0.21 +0.2 4,357,052 - DZA65_RS20110 0.21 +1.1 4,357,052 - DZA65_RS20110 0.21 -0.4 4,357,052 - DZA65_RS20110 0.21 -1.3 4,357,052 - DZA65_RS20110 0.21 -0.0 4,357,052 - DZA65_RS20110 0.21 -0.8 4,357,076 + DZA65_RS20110 0.23 +1.5 4,357,076 + DZA65_RS20110 0.23 +1.4 4,357,077 - DZA65_RS20110 0.23 -0.6 4,357,077 - DZA65_RS20110 0.23 -0.8 4,357,079 + DZA65_RS20110 0.23 +0.2 4,357,096 - DZA65_RS20110 0.24 +0.1 4,357,098 + DZA65_RS20110 0.24 -1.5 4,357,133 - DZA65_RS20110 0.27 -0.3 4,357,244 - DZA65_RS20110 0.34 +0.7 4,357,252 - +1.7 4,357,356 + DZA65_RS20110 0.41 -1.1 4,357,356 + DZA65_RS20110 0.41 -1.4 4,357,357 - DZA65_RS20110 0.41 +0.5 4,357,357 - DZA65_RS20110 0.41 -0.1 4,357,360 + DZA65_RS20110 0.42 -0.9 4,357,360 + DZA65_RS20110 0.42 -0.3 4,357,360 + DZA65_RS20110 0.42 -0.9 4,357,361 - DZA65_RS20110 0.42 -0.5 4,357,361 - DZA65_RS20110 0.42 -1.3 4,357,447 + DZA65_RS20110 0.47 +0.1 4,357,529 + DZA65_RS20110 0.53 -0.2 4,357,577 + DZA65_RS20110 0.56 -1.4 4,357,635 - DZA65_RS20110 0.59 +0.7 4,357,635 - DZA65_RS20110 0.59 -2.2 4,357,663 - DZA65_RS20110 0.61 -0.2 4,357,671 + DZA65_RS20110 0.62 +1.7 4,357,672 - DZA65_RS20110 0.62 +0.7 4,357,706 + DZA65_RS20110 0.64 -0.9 4,357,707 - DZA65_RS20110 0.64 -2.2 4,357,707 - DZA65_RS20110 0.64 -1.0
Or see this region's nucleotide sequence