Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS19805

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,285,931	+		DZA65_RS19800	0.31	+0.8
4,285,931	+		DZA65_RS19800	0.31	-0.1
4,285,931	+		DZA65_RS19800	0.31	+1.7
4,285,931	+		DZA65_RS19800	0.31	-2.2
4,285,932	-		DZA65_RS19800	0.31	+0.1
4,285,935	+		DZA65_RS19800	0.32	+0.4
4,285,935	+		DZA65_RS19800	0.32	+0.7
4,285,936	-		DZA65_RS19800	0.32	-1.1
4,285,936	-		DZA65_RS19800	0.32	+0.7
4,285,936	-		DZA65_RS19800	0.32	+1.4
4,286,023	+		DZA65_RS19800	0.39	-1.5
4,286,023	+		DZA65_RS19800	0.39	-1.0
4,286,023	+		DZA65_RS19800	0.39	+0.5
4,286,023	+		DZA65_RS19800	0.39	+0.7
4,286,024	-		DZA65_RS19800	0.39	-0.3
4,286,024	-		DZA65_RS19800	0.39	-0.2
4,286,024	-		DZA65_RS19800	0.39	-1.1
4,286,024	-		DZA65_RS19800	0.39	+0.1
4,286,024	-		DZA65_RS19800	0.39	-0.9
4,286,024	-		DZA65_RS19800	0.39	+0.5
4,286,134	+		DZA65_RS19800	0.48	+0.2
4,286,134	+		DZA65_RS19800	0.48	+0.3
4,286,135	-		DZA65_RS19800	0.48	-1.3
4,286,135	-		DZA65_RS19800	0.48	-0.5
4,286,135	-		DZA65_RS19800	0.48	-0.3
4,286,135	-		DZA65_RS19800	0.48	+1.7
4,286,135	-		DZA65_RS19800	0.48	+0.7
4,286,135	-		DZA65_RS19800	0.48	+0.6
4,286,135	-		DZA65_RS19800	0.48	-1.9
4,286,149	+		DZA65_RS19800	0.49	-0.5
4,286,149	+		DZA65_RS19800	0.49	-0.7
4,286,150	-		DZA65_RS19800	0.50	-0.8
4,286,150	-		DZA65_RS19800	0.50	+0.2
4,286,150	-		DZA65_RS19800	0.50	-0.4
4,286,168	+		DZA65_RS19800	0.51	+0.3
4,286,168	+		DZA65_RS19800	0.51	+1.4
4,286,168	+		DZA65_RS19800	0.51	+0.5
4,286,168	+		DZA65_RS19800	0.51	-0.1
4,286,168	+		DZA65_RS19800	0.51	+0.3
4,286,168	+		DZA65_RS19800	0.51	-1.1
4,286,168	+		DZA65_RS19800	0.51	+0.4
4,286,168	+		DZA65_RS19800	0.51	+0.3
4,286,169	-		DZA65_RS19800	0.51	-2.6
4,286,169	-		DZA65_RS19800	0.51	+0.7
4,286,169	-		DZA65_RS19800	0.51	+0.3
4,286,169	-		DZA65_RS19800	0.51	-1.3
4,286,169	-				+1.7
4,286,169	-		DZA65_RS19800	0.51	-0.1
4,286,169	-		DZA65_RS19800	0.51	+0.2
4,286,169	-		DZA65_RS19800	0.51	-0.7
4,286,169	-		DZA65_RS19800	0.51	-1.3
4,286,169	-		DZA65_RS19800	0.51	-2.7
4,286,169	-		DZA65_RS19800	0.51	-2.3
4,286,172	+		DZA65_RS19800	0.51	+0.5
4,286,173	-		DZA65_RS19800	0.51	-0.3
4,286,173	-		DZA65_RS19800	0.51	-0.1
4,286,173	-		DZA65_RS19800	0.51	-2.7
4,286,173	-		DZA65_RS19800	0.51	-1.7
4,286,173	-		DZA65_RS19800	0.51	-1.0
4,286,173	-		DZA65_RS19800	0.51	+0.3
4,286,173	-		DZA65_RS19800	0.51	-1.3
4,286,173	-		DZA65_RS19800	0.51	-0.3
4,286,173	-		DZA65_RS19800	0.51	+1.4
4,286,187	+		DZA65_RS19800	0.53	-1.2
4,286,221	+		DZA65_RS19800	0.55	-1.3
4,286,222	-		DZA65_RS19800	0.56	-2.0
4,286,222	-		DZA65_RS19800	0.56	-0.4
4,286,222	-		DZA65_RS19800	0.56	-1.1
4,286,233	+		DZA65_RS19800	0.56	+0.7
4,286,234	-		DZA65_RS19800	0.57	+0.7
4,286,235	+		DZA65_RS19800	0.57	-1.6
4,286,235	+		DZA65_RS19800	0.57	-0.9
4,286,235	+		DZA65_RS19800	0.57	-0.7
4,286,235	+		DZA65_RS19800	0.57	-0.9
4,286,236	-		DZA65_RS19800	0.57	-0.3
4,286,236	-		DZA65_RS19800	0.57	+0.1
4,286,236	-		DZA65_RS19800	0.57	-0.1
4,286,236	-		DZA65_RS19800	0.57	+1.1
4,286,236	-		DZA65_RS19800	0.57	-0.3
4,286,236	-		DZA65_RS19800	0.57	+0.1
4,286,236	-		DZA65_RS19800	0.57	-0.1
4,286,236	-		DZA65_RS19800	0.57	-0.0
4,286,236	-		DZA65_RS19800	0.57	-1.0
4,286,245	+		DZA65_RS19800	0.57	+0.5
4,286,245	+		DZA65_RS19800	0.57	-1.5
4,286,245	+		DZA65_RS19800	0.57	+0.1
4,286,245	+		DZA65_RS19800	0.57	-1.3
4,286,245	+		DZA65_RS19800	0.57	-0.7
4,286,245	+		DZA65_RS19800	0.57	+0.1
4,286,245	+		DZA65_RS19800	0.57	-0.4
4,286,245	+		DZA65_RS19800	0.57	-0.7
4,286,246	-		DZA65_RS19800	0.58	+0.3
4,286,274	+		DZA65_RS19800	0.60	-0.8
4,286,274	+		DZA65_RS19800	0.60	+0.7
4,286,275	-		DZA65_RS19800	0.60	-0.1
4,286,334	-		DZA65_RS19800	0.65	-0.8
4,286,463	+		DZA65_RS19800	0.76	+0.9
4,286,463	+		DZA65_RS19800	0.76	-1.3
4,286,463	+		DZA65_RS19800	0.76	-0.7
4,286,464	-		DZA65_RS19800	0.76	-0.7
4,286,464	-		DZA65_RS19800	0.76	-0.1
4,286,464	-		DZA65_RS19800	0.76	-0.1
4,286,464	-		DZA65_RS19800	0.76	+0.9
4,286,464	-		DZA65_RS19800	0.76	-1.0
4,286,464	-		DZA65_RS19800	0.76	-0.1
4,286,507	+		DZA65_RS19800	0.79	+1.1
4,286,527	-		DZA65_RS19800	0.81	+0.3
4,286,558	+		DZA65_RS19800	0.83	-1.3
4,286,581	-		DZA65_RS19800	0.85	-0.5
4,286,670	+				+0.6
4,286,671	-				-1.0
4,286,671	-				-0.1
4,286,685	+				-1.0
4,286,685	+				+0.3
4,286,686	-				+0.1
4,286,691	-				+0.1
4,286,726	+				+1.7
4,286,792	+				-1.5
4,286,792	+				-0.9
4,286,831	+				-0.7
4,286,832	-				+0.9
4,286,832	-				+0.4
4,286,850	+				+0.4
4,286,850	+				-2.6
4,286,850	+				-0.9
4,286,850	+				+0.2
4,286,851	-				-0.7
4,286,851	-				+0.2
4,286,851	-				+1.0
4,286,851	-				+0.2
4,286,856	+				-1.3
4,286,856	+				-1.3
4,286,856	+				+0.1
4,286,856	+				-0.7
4,286,856	+				-0.2
4,286,856	+				+0.3
4,286,856	+				-0.4
4,286,856	+				-1.3
4,286,856	+				-0.4
4,286,856	+				-2.3
4,286,857	-				+1.7
4,286,857	-				-1.2
4,286,857	-				-0.5
4,286,857	-				-0.8
4,286,857	-				-0.0
4,286,857	-				-0.6
4,286,857	-				-0.3
4,286,857	-				+1.7
4,286,857	-				-0.7
4,286,857	-				-1.7
4,286,857	-				-0.7
4,286,857	-				-1.8
4,286,857	-				-0.1
4,286,857	-				+0.9
4,286,857	-				-1.8
4,286,858	+				+0.9
4,286,858	+				-0.1
4,286,858	+				-0.9
4,286,858	+				+0.1
4,286,858	+				+0.5
4,286,858	+				-0.2
4,286,858	+				+0.3
4,286,858	+				-0.0
4,286,858	+				-2.3
4,286,858	+				-0.1
4,286,858	+				-1.7
4,286,858	+				+1.3
4,286,858	+				-0.3
4,286,858	+				+0.2
4,286,858	+				-0.7
4,286,859	-				+0.7
4,286,859	-				-1.1
4,286,859	-				+0.1
4,286,859	-				-1.1
4,286,859	-				-0.2
4,286,859	-				+0.8
4,286,859	-				+0.7
4,286,859	-				+1.7
4,286,859	-				+2.0
4,286,859	-				+2.1
4,286,871	+				+0.9
4,286,871	+				+0.9
4,286,871	+				-1.5
4,286,871	+				-0.3
4,286,871	+				-1.1
4,286,871	+				+0.1
4,286,871	+				-1.8
4,286,871	+				+0.3
4,286,871	+				-0.3
4,286,872	-				+0.7
4,286,872	-				-0.5
4,286,872	-				+0.1
4,286,872	-				+0.1
4,286,872	-				+1.0
4,286,872	-				+1.1
4,286,872	-				+0.5
4,286,872	-				-0.0
4,286,872	-				-0.8
4,286,872	-				-0.5
4,286,872	-				+0.7
4,286,873	+				+0.9
4,286,873	+				-0.5
4,286,873	+				+0.8
4,286,874	-				-0.2
4,286,874	-				-2.3
4,286,886	+				+0.5
4,286,886	+				+0.3
4,286,887	-				+1.1
4,286,887	-				+0.1
4,286,888	+				+0.1
4,286,888	+				+1.4
4,286,888	+				+1.1
4,286,888	+				-1.7
4,286,888	+				-0.7
4,286,889	-				+0.7
4,286,889	-				-1.1
4,286,889	-				-0.3
4,286,901	+				-1.5
4,286,901	+				-0.1
4,286,901	+				+0.4
4,286,901	+				-3.1
4,286,901	+				-0.7
4,286,901	+				-0.5
4,286,902	-				-2.8
4,286,902	-				-0.3
4,286,902	-				-0.1
4,286,902	-				+0.4
4,286,902	-				+0.6
4,286,961	+				-0.3
4,286,961	+				+0.7
4,286,962	-				-0.9
4,286,962	-				-0.1
4,287,029	+		DZA65_RS19805	0.13	-0.1
4,287,030	-		DZA65_RS19805	0.13	-0.2
4,287,030	-		DZA65_RS19805	0.13	+0.9
4,287,030	-		DZA65_RS19805	0.13	-2.3
4,287,030	-		DZA65_RS19805	0.13	-1.1
4,287,141	+		DZA65_RS19805	0.28	-1.0
4,287,141	+		DZA65_RS19805	0.28	-0.3
4,287,141	+		DZA65_RS19805	0.28	-1.7
4,287,190	+		DZA65_RS19805	0.34	+0.9
4,287,190	+		DZA65_RS19805	0.34	-1.1
4,287,190	+		DZA65_RS19805	0.34	-0.7
4,287,190	+		DZA65_RS19805	0.34	-0.7
4,287,190	+		DZA65_RS19805	0.34	+1.0
4,287,190	+		DZA65_RS19805	0.34	-0.3
4,287,191	-		DZA65_RS19805	0.34	-2.2
4,287,191	-		DZA65_RS19805	0.34	-1.4
4,287,191	-		DZA65_RS19805	0.34	-0.2
4,287,191	-		DZA65_RS19805	0.34	-0.4
4,287,210	+		DZA65_RS19805	0.37	-2.1
4,287,210	+		DZA65_RS19805	0.37	-2.7
4,287,210	+		DZA65_RS19805	0.37	-0.3
4,287,210	+		DZA65_RS19805	0.37	+1.1
4,287,211	-		DZA65_RS19805	0.37	+0.2
4,287,254	+		DZA65_RS19805	0.42	-0.1
4,287,344	+		DZA65_RS19805	0.54	+1.1
4,287,350	+		DZA65_RS19805	0.55	-0.7
4,287,350	+		DZA65_RS19805	0.55	-0.7
4,287,351	-		DZA65_RS19805	0.55	-0.9
4,287,374	+		DZA65_RS19805	0.58	-0.1
4,287,374	+		DZA65_RS19805	0.58	+0.7
4,287,374	+		DZA65_RS19805	0.58	-2.0
4,287,374	+		DZA65_RS19805	0.58	-1.9
4,287,374	+		DZA65_RS19805	0.58	+0.3
4,287,374	+				-0.3
4,287,375	-		DZA65_RS19805	0.58	+0.1
4,287,375	-		DZA65_RS19805	0.58	+0.9
4,287,375	-		DZA65_RS19805	0.58	+0.3
4,287,410	+		DZA65_RS19805	0.63	-1.2
4,287,410	+		DZA65_RS19805	0.63	-1.9
4,287,410	+				+1.1
4,287,411	-		DZA65_RS19805	0.63	+1.0
4,287,411	-		DZA65_RS19805	0.63	-0.3
4,287,411	-		DZA65_RS19805	0.63	-0.1
4,287,411	-		DZA65_RS19805	0.63	-1.0
4,287,567	-		DZA65_RS19805	0.83	-2.1
4,287,620	+		DZA65_RS19805	0.90	+0.1
4,287,620	+		DZA65_RS19805	0.90	-0.4
4,287,620	+		DZA65_RS19805	0.90	-0.7
4,287,621	-		DZA65_RS19805	0.90	-0.9
4,287,626	+				-0.9
4,287,626	+				-0.9
4,287,626	+				-0.5
4,287,627	-				-0.0
4,287,646	-				-0.4
4,287,646	-				+0.4
4,287,705	+				-0.6
4,287,706	-				+0.2
4,287,711	+				-0.9
4,287,711	+				-0.7
4,287,712	-				+2.1
4,287,712	-				-1.7
4,287,714	-				+0.0
4,287,714	-				-0.9
4,287,827	-		DZA65_RS19810	0.12	-0.1
4,287,908	-		DZA65_RS19810	0.20	-0.7
4,287,951	-		DZA65_RS19810	0.24	+1.0
4,287,961	+		DZA65_RS19810	0.25	+0.1
4,287,962	-		DZA65_RS19810	0.26	+0.3
4,287,962	-		DZA65_RS19810	0.26	+0.7
4,287,962	-		DZA65_RS19810	0.26	+0.7
4,287,979	-		DZA65_RS19810	0.27	-0.7
4,288,008	-		DZA65_RS19810	0.30	-0.4
4,288,045	+		DZA65_RS19810	0.34	-1.3
4,288,055	-		DZA65_RS19810	0.35	+0.1
4,288,111	-		DZA65_RS19810	0.41	+0.3
4,288,127	-		DZA65_RS19810	0.42	-0.3
4,288,143	+		DZA65_RS19810	0.44	-0.3
4,288,143	+		DZA65_RS19810	0.44	-0.5
4,288,143	+		DZA65_RS19810	0.44	+1.2
4,288,143	+		DZA65_RS19810	0.44	+0.4
4,288,144	-		DZA65_RS19810	0.44	-1.0
4,288,144	-		DZA65_RS19810	0.44	-1.1
4,288,144	-		DZA65_RS19810	0.44	-1.4
4,288,144	-		DZA65_RS19810	0.44	+0.1
4,288,252	+		DZA65_RS19810	0.55	-0.7
4,288,252	+		DZA65_RS19810	0.55	+2.0
4,288,252	+		DZA65_RS19810	0.55	-0.5
4,288,253	-		DZA65_RS19810	0.55	-0.3
4,288,253	-		DZA65_RS19810	0.55	+0.4
4,288,253	-		DZA65_RS19810	0.55	-1.4
4,288,253	-		DZA65_RS19810	0.55	+1.1
4,288,294	+		DZA65_RS19810	0.59	-0.2
4,288,295	-		DZA65_RS19810	0.59	+1.9
4,288,326	-		DZA65_RS19810	0.62	-1.3
4,288,334	+		DZA65_RS19810	0.63	-1.5
4,288,334	+		DZA65_RS19810	0.63	+0.1
4,288,334	+		DZA65_RS19810	0.63	-1.3
4,288,335	-		DZA65_RS19810	0.63	+1.7
4,288,335	-		DZA65_RS19810	0.63	-1.3
4,288,335	-		DZA65_RS19810	0.63	+0.7
4,288,335	-		DZA65_RS19810	0.63	-0.8
4,288,335	-		DZA65_RS19810	0.63	+1.1
4,288,379	-		DZA65_RS19810	0.68	+1.4
4,288,379	-		DZA65_RS19810	0.68	-1.7
4,288,400	+		DZA65_RS19810	0.70	+0.6
4,288,400	+		DZA65_RS19810	0.70	+0.1
4,288,400	+		DZA65_RS19810	0.70	-0.3
4,288,400	+		DZA65_RS19810	0.70	-0.7
4,288,400	+		DZA65_RS19810	0.70	-0.2
4,288,400	+		DZA65_RS19810	0.70	-0.5
4,288,401	-		DZA65_RS19810	0.70	-0.0
4,288,401	-		DZA65_RS19810	0.70	-2.2
4,288,401	-		DZA65_RS19810	0.70	-1.1
4,288,411	+		DZA65_RS19810	0.71	+0.4
4,288,411	+		DZA65_RS19810	0.71	-0.7
4,288,411	+		DZA65_RS19810	0.71	+0.8
4,288,411	+		DZA65_RS19810	0.71	+0.9
4,288,411	+		DZA65_RS19810	0.71	-2.2
4,288,411	+		DZA65_RS19810	0.71	+0.1
4,288,411	+		DZA65_RS19810	0.71	-0.7
4,288,411	+		DZA65_RS19810	0.71	-0.1
4,288,411	+		DZA65_RS19810	0.71	-0.4
4,288,411	+		DZA65_RS19810	0.71	+2.3
4,288,411	+		DZA65_RS19810	0.71	-0.5
4,288,412	-		DZA65_RS19810	0.71	-1.4
4,288,412	-		DZA65_RS19810	0.71	-1.2
4,288,412	-		DZA65_RS19810	0.71	-1.6
4,288,412	-		DZA65_RS19810	0.71	-0.1
4,288,412	-		DZA65_RS19810	0.71	-1.8
4,288,412	-		DZA65_RS19810	0.71	-0.1
4,288,415	+		DZA65_RS19810	0.71	-0.7
4,288,415	+		DZA65_RS19810	0.71	+0.7
4,288,415	+		DZA65_RS19810	0.71	+0.3
4,288,415	+		DZA65_RS19810	0.71	+0.8
4,288,415	+		DZA65_RS19810	0.71	-1.5
4,288,416	-		DZA65_RS19810	0.72	+1.1
4,288,416	-		DZA65_RS19810	0.72	-0.0
4,288,416	-		DZA65_RS19810	0.72	+1.3
4,288,416	-		DZA65_RS19810	0.72	+0.9
4,288,416	-				+0.3
4,288,416	-		DZA65_RS19810	0.72	-0.7
4,288,416	-		DZA65_RS19810	0.72	-1.1
4,288,495	+		DZA65_RS19810	0.80	-0.9
4,288,496	-		DZA65_RS19810	0.80	-0.7
4,288,496	-		DZA65_RS19810	0.80	-1.1
4,288,573	+		DZA65_RS19810	0.87	+0.3
4,288,573	+		DZA65_RS19810	0.87	+0.8
4,288,573	+		DZA65_RS19810	0.87	+1.7
4,288,663	+				-1.5
4,288,663	+				-0.6
4,288,663	+				-0.6
4,288,664	-				+1.0