Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18870

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,073,735	+		DZA65_RS18865	0.35	+0.5
4,073,735	+		DZA65_RS18865	0.35	-0.3
4,073,735	+		DZA65_RS18865	0.35	+0.7
4,073,735	+		DZA65_RS18865	0.35	-0.2
4,073,735	+		DZA65_RS18865	0.35	-0.6
4,073,735	+		DZA65_RS18865	0.35	-0.8
4,073,735	+		DZA65_RS18865	0.35	-0.3
4,073,735	+		DZA65_RS18865	0.35	-1.8
4,073,735	+		DZA65_RS18865	0.35	-1.7
4,073,735	+		DZA65_RS18865	0.35	-1.2
4,073,735	+		DZA65_RS18865	0.35	+0.1
4,073,735	+		DZA65_RS18865	0.35	-1.3
4,073,735	+		DZA65_RS18865	0.35	-0.2
4,073,735	+		DZA65_RS18865	0.35	-0.3
4,073,735	+		DZA65_RS18865	0.35	-0.2
4,073,735	+		DZA65_RS18865	0.35	-0.3
4,073,735	+		DZA65_RS18865	0.35	+1.2
4,073,735	+		DZA65_RS18865	0.35	-0.2
4,073,736	-		DZA65_RS18865	0.35	+0.3
4,073,736	-		DZA65_RS18865	0.35	-0.3
4,073,736	-		DZA65_RS18865	0.35	-1.0
4,073,736	-		DZA65_RS18865	0.35	-0.7
4,073,736	-		DZA65_RS18865	0.35	-1.5
4,073,736	-		DZA65_RS18865	0.35	-0.2
4,073,736	-		DZA65_RS18865	0.35	-0.7
4,073,871	+		DZA65_RS18865	0.47	-0.3
4,073,872	-		DZA65_RS18865	0.47	-0.3
4,073,890	+		DZA65_RS18865	0.49	+0.2
4,073,890	+		DZA65_RS18865	0.49	-0.7
4,073,890	+		DZA65_RS18865	0.49	+1.1
4,073,890	+		DZA65_RS18865	0.49	-0.7
4,073,890	+		DZA65_RS18865	0.49	-2.6
4,073,890	+		DZA65_RS18865	0.49	+0.1
4,073,890	+		DZA65_RS18865	0.49	-0.0
4,073,890	+		DZA65_RS18865	0.49	-0.5
4,073,890	+		DZA65_RS18865	0.49	-0.9
4,073,891	-		DZA65_RS18865	0.49	-1.9
4,073,891	-		DZA65_RS18865	0.49	-0.9
4,073,891	-		DZA65_RS18865	0.49	-0.5
4,073,891	-		DZA65_RS18865	0.49	-1.2
4,074,196	+		DZA65_RS18865	0.76	-0.7
4,074,205	+		DZA65_RS18865	0.77	-2.8
4,074,319	-		DZA65_RS18865	0.88	+0.8
4,074,333	-		DZA65_RS18865	0.89	-1.5
4,074,333	-		DZA65_RS18865	0.89	+0.3
4,074,381	+				+0.1
4,074,401	+				+0.1
4,074,409	-				+0.5
4,074,419	-				-2.3
4,074,419	-				-0.6
4,074,439	-				+0.1
4,074,616	+				+0.4
4,074,617	-				-1.2
4,074,617	-				-0.2
4,074,890	+		DZA65_RS18870	0.32	-0.8
4,075,037	-		DZA65_RS18870	0.46	+0.1
4,075,067	-		DZA65_RS18870	0.48	+0.5
4,075,080	+		DZA65_RS18870	0.49	-0.7
4,075,080	+		DZA65_RS18870	0.49	-0.8
4,075,080	+		DZA65_RS18870	0.49	+0.1
4,075,081	-		DZA65_RS18870	0.50	-0.3
4,075,081	-		DZA65_RS18870	0.50	+0.3
4,075,091	-		DZA65_RS18870	0.50	+0.2
4,075,091	-		DZA65_RS18870	0.50	+0.8
4,075,161	-		DZA65_RS18870	0.57	-0.8
4,075,161	-		DZA65_RS18870	0.57	+1.1
4,075,161	-		DZA65_RS18870	0.57	+1.7
4,075,390	+		DZA65_RS18870	0.78	-0.9
4,075,514	+		DZA65_RS18870	0.89	-0.7
4,075,577	+				-0.8
4,075,577	+				-0.5
4,075,578	-				-0.8
4,075,589	+				+0.3
4,075,589	+				-0.9
4,075,589	+				-1.2
4,075,590	-				+0.7
4,075,640	+				-1.3
4,075,662	+				+0.1
4,075,662	+				-0.3
4,075,662	+				-0.3
4,075,662	+				-0.9
4,075,663	-				-1.8
4,075,666	+				+0.8
4,075,666	+				+1.1
4,075,666	+				-0.6
4,075,666	+				-0.3
4,075,666	+				-1.2
4,075,666	+				-0.3
4,075,690	+				-0.3
4,075,865	+				-0.5
4,075,865	+				-0.2
4,075,865	+				-1.9
4,075,875	+				-1.0
4,075,875	+				-2.0
4,075,875	+				-0.0
4,075,875	+				-0.7
4,075,875	+				+0.2
4,075,875	+				+0.2
4,075,876	-				-0.8
4,075,876	-				-0.3
4,075,876	-				-0.8
4,075,876	-				-2.0
4,075,951	-		DZA65_RS18875	0.13	-0.5
4,075,964	+		DZA65_RS18875	0.13	+0.7
4,075,994	+				+1.7
4,075,994	+		DZA65_RS18875	0.14	-0.1
4,075,995	-		DZA65_RS18875	0.14	-1.3
4,076,036	+		DZA65_RS18875	0.16	-0.6
4,076,036	+		DZA65_RS18875	0.16	+0.9
4,076,036	+		DZA65_RS18875	0.16	+1.4
4,076,036	+		DZA65_RS18875	0.16	-0.6
4,076,037	-		DZA65_RS18875	0.16	-1.2
4,076,138	+		DZA65_RS18875	0.20	-1.2
4,076,152	+		DZA65_RS18875	0.21	-0.2
4,076,152	+		DZA65_RS18875	0.21	-0.2
4,076,153	-		DZA65_RS18875	0.21	-0.9
4,076,153	-		DZA65_RS18875	0.21	+0.2
4,076,387	+		DZA65_RS18875	0.30	+0.4
4,076,388	-		DZA65_RS18875	0.30	-0.3
4,076,388	-		DZA65_RS18875	0.30	+0.4
4,076,472	+		DZA65_RS18875	0.34	-0.9
4,076,472	+		DZA65_RS18875	0.34	-2.3
4,076,472	+		DZA65_RS18875	0.34	+0.1
4,076,529	-		DZA65_RS18875	0.36	-1.2
4,076,592	+		DZA65_RS18875	0.38	-1.7
4,076,592	+		DZA65_RS18875	0.38	-0.3
4,076,593	-		DZA65_RS18875	0.38	+1.1