Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18285

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,942,156	+				-1.5
3,942,189	+				-1.4
3,942,189	+				-0.3
3,942,189	+				-0.2
3,942,189	+				-1.1
3,942,248	-				-0.7
3,942,248	-				+0.9
3,942,251	+				-0.5
3,942,251	+				-2.0
3,942,251	+				+0.3
3,942,251	+				-0.8
3,942,251	+				+0.3
3,942,251	+				+0.2
3,942,251	+				+1.1
3,942,252	-				-0.7
3,942,252	-				-0.7
3,942,252	-				-0.5
3,942,252	-				+0.6
3,942,252	-				+0.0
3,942,252	-				-0.5
3,942,252	-				-0.6
3,942,356	-				+0.2
3,942,356	-				-1.2
3,942,364	+				-0.6
3,942,365	-				-0.4
3,942,368	+				-1.4
3,942,392	+				-2.1
3,942,393	-				+0.4
3,942,422	-				-2.1
3,942,422	-				-0.3
3,942,422	-				+1.6
3,942,472	+				-1.7
3,943,047	+				-0.2
3,943,047	+				-0.5
3,943,048	-				+1.6
3,943,048	-				+0.6
3,943,048	-				-0.4
3,943,048	-				+0.3
3,943,048	-				-0.8
3,943,048	-				-2.3
3,943,054	-				-0.7
3,943,054	-				-0.4
3,943,194	+		DZA65_RS18285	0.20	+0.0
3,943,195	-		DZA65_RS18285	0.20	-0.5
3,943,200	+		DZA65_RS18285	0.22	-1.4
3,943,200	+		DZA65_RS18285	0.22	-1.4
3,943,200	+		DZA65_RS18285	0.22	-1.0
3,943,200	+		DZA65_RS18285	0.22	-0.4
3,943,231	+		DZA65_RS18285	0.31	-0.4
3,943,288	+		DZA65_RS18285	0.47	+0.3
3,943,289	-		DZA65_RS18285	0.47	-1.0
3,943,305	+		DZA65_RS18285	0.52	-1.4
3,943,306	-		DZA65_RS18285	0.52	-0.4
3,943,317	+		DZA65_RS18285	0.55	-1.0
3,943,365	+		DZA65_RS18285	0.69	-0.4
3,943,365	+		DZA65_RS18285	0.69	-0.3
3,943,366	-		DZA65_RS18285	0.70	-2.0
3,943,366	-		DZA65_RS18285	0.70	-1.4
3,943,367	+		DZA65_RS18285	0.70	-1.5
3,943,367	+		DZA65_RS18285	0.70	-2.0
3,943,367	+		DZA65_RS18285	0.70	+0.9
3,943,367	+		DZA65_RS18285	0.70	-2.2
3,943,368	-		DZA65_RS18285	0.70	-0.6
3,943,368	-		DZA65_RS18285	0.70	+0.9
3,943,375	-		DZA65_RS18285	0.72	-0.7
3,943,462	+				-1.5
3,943,463	-				-3.0
3,943,463	-				-0.4
3,943,476	-				+0.6
3,943,490	+				-0.7
3,943,490	+				-1.8
3,943,491	-				-0.7
3,943,491	-				-0.0
3,943,491	-				+0.2
3,943,491	-				-1.2
3,943,491	-				-0.1
3,943,536	-				+0.0
3,943,536	-				-0.2
3,943,536	-				-1.4
3,943,536	-				-2.5
3,943,537	+				-0.8
3,943,537	+				+0.6
3,943,557	-				-0.7
3,943,561	+				-0.7
3,943,561	+				-0.7
3,943,561	+				+0.0
3,943,561	+				-2.0
3,943,562	-				-2.0
3,943,601	+				-0.4
3,943,601	+				-2.0
3,943,601	+				-1.4
3,943,601	+				-1.5
3,943,601	+				+0.0
3,943,601	+				-0.2
3,943,602	-				+2.0
3,943,602	-				-2.2
3,943,602	-				+0.5
3,943,602	-				-1.0
3,943,602	-				+0.6
3,943,602	-				-1.0
3,943,602	-				-2.3
3,943,602	-				-2.0
3,943,629	-				-0.3
3,943,672	-				-0.5
3,943,681	+				+0.0
3,943,681	+				+0.0
3,943,681	+				+0.6
3,943,681	+				-1.1
3,943,681	+				+0.9
3,943,682	-				-0.4
3,943,690	+				-2.2
3,943,691	-				-0.5
3,943,777	-				-0.5
3,943,777	-				-0.3
3,943,817	+				-1.0
3,943,817	+				-0.9
3,943,817	+				+0.7
3,943,818	-				-0.6
3,943,818	-				-1.5
3,944,008	+		DZA65_RS18290	0.14	-1.1
3,944,008	+		DZA65_RS18290	0.14	+0.3
3,944,008	+		DZA65_RS18290	0.14	-0.0
3,944,009	-		DZA65_RS18290	0.14	-0.2
3,944,009	-		DZA65_RS18290	0.14	-0.5
3,944,009	-		DZA65_RS18290	0.14	-0.4
3,944,009	-		DZA65_RS18290	0.14	-0.3
3,944,009	-		DZA65_RS18290	0.14	+0.6
3,944,009	-		DZA65_RS18290	0.14	+0.0
3,944,009	-		DZA65_RS18290	0.14	+1.6
3,944,021	+		DZA65_RS18290	0.14	-0.7
3,944,022	-		DZA65_RS18290	0.15	-1.0
3,944,022	-		DZA65_RS18290	0.15	-0.4
3,944,022	-		DZA65_RS18290	0.15	-1.0
3,944,022	-		DZA65_RS18290	0.15	+0.1
3,944,095	+		DZA65_RS18290	0.16	+0.2
3,944,095	+		DZA65_RS18290	0.16	-1.7
3,944,095	+		DZA65_RS18290	0.16	-0.3
3,944,095	+		DZA65_RS18290	0.16	-1.0
3,944,095	+		DZA65_RS18290	0.16	+0.3
3,944,095	+		DZA65_RS18290	0.16	-2.1
3,944,096	-		DZA65_RS18290	0.16	-0.9
3,944,127	-		DZA65_RS18290	0.17	+0.0
3,944,127	-		DZA65_RS18290	0.17	-0.2
3,944,298	+		DZA65_RS18290	0.22	-1.8
3,944,299	-		DZA65_RS18290	0.22	-1.4
3,944,469	+		DZA65_RS18290	0.26	-1.8
3,944,470	-		DZA65_RS18290	0.26	-0.4
3,944,470	-		DZA65_RS18290	0.26	-1.2
3,944,470	-		DZA65_RS18290	0.26	+0.6