Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18110

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,896,651	-				+0.0
3,896,687	+				-1.0
3,896,727	-				-0.6
3,896,727	-				-2.0
3,896,744	-				-0.3
3,896,793	+				-0.4
3,896,800	+				-1.2
3,897,022	-				-1.0
3,897,039	+				+0.9
3,897,039	+				-1.0
3,897,040	-				-0.9
3,897,072	-				+0.9
3,897,072	-				-1.0
3,897,072	-				+0.3
3,897,074	+				-0.5
3,897,075	-				-0.6
3,897,106	+				-1.7
3,897,107	-				-0.5
3,897,107	-				-1.3
3,897,135	+				-0.2
3,897,135	+				+0.0
3,897,136	-				-1.0
3,897,243	+		DZA65_RS18105	0.19	-2.2
3,897,244	-		DZA65_RS18105	0.20	-0.7
3,897,244	-		DZA65_RS18105	0.20	+2.0
3,897,310	+				-0.7
3,897,310	+		DZA65_RS18105	0.37	+0.0
3,897,310	+		DZA65_RS18105	0.37	+0.0
3,897,310	+		DZA65_RS18105	0.37	+2.2
3,897,311	-		DZA65_RS18105	0.38	+0.3
3,897,313	-		DZA65_RS18105	0.38	-1.2
3,897,385	+		DZA65_RS18105	0.58	+0.6
3,897,538	+				-0.4
3,897,538	+				+0.3
3,897,538	+				-1.8
3,897,610	+				+0.9
3,897,610	+				-0.3
3,897,610	+				+0.9
3,897,611	-				-0.4
3,897,611	-				-0.6
3,897,611	-				+0.0
3,897,611	-				-0.1
3,897,611	-				+1.6
3,897,631	+				-0.7
3,897,639	+				+0.9
3,897,639	+				+0.6
3,897,640	-				-0.8
3,897,691	+		DZA65_RS18110	0.10	+1.0
3,897,691	+		DZA65_RS18110	0.10	+0.7
3,897,692	-		DZA65_RS18110	0.10	+0.2
3,897,875	-		DZA65_RS18110	0.38	+0.0
3,898,067	+		DZA65_RS18110	0.66	-1.0
3,898,068	-		DZA65_RS18110	0.66	+2.2
3,898,068	-		DZA65_RS18110	0.66	+0.0
3,898,117	+		DZA65_RS18110	0.74	-1.0
3,898,177	+		DZA65_RS18110	0.82	+0.3
3,898,190	-		DZA65_RS18110	0.84	-0.4
3,898,190	-		DZA65_RS18110	0.84	+0.6
3,898,190	-		DZA65_RS18110	0.84	+0.1
3,898,190	-		DZA65_RS18110	0.84	-0.5
3,898,288	-				-1.0
3,898,306	-				+0.4
3,898,406	-				-1.6
3,898,406	-				+0.0
3,898,406	-				+0.6
3,898,454	+				+0.0
3,898,454	+				+1.3
3,898,455	-				-0.8
3,898,462	+				-0.4
3,898,462	+				-0.7
3,898,462	+				-1.0
3,898,463	-				-0.1
3,898,468	+				-1.8
3,898,476	+				+1.2
3,898,476	+				-1.2
3,898,476	+				-2.0
3,898,486	+				-1.7
3,898,486	+				-0.8
3,898,487	-				-1.8
3,898,487	-				+0.1
3,898,487	-				-2.2
3,898,487	-				-0.1
3,898,487	-				-1.0
3,898,487	-				-0.3
3,898,487	-				-0.2
3,898,487	-				+0.0
3,898,530	+				+0.6
3,898,530	+				-1.2
3,898,530	+				-0.1
3,898,592	+		DZA65_RS18115	0.10	-1.0
3,898,603	+		DZA65_RS18115	0.12	-1.6
3,898,603	+		DZA65_RS18115	0.12	-0.8
3,898,604	-		DZA65_RS18115	0.12	+1.0
3,898,718	+		DZA65_RS18115	0.23	-2.6
3,898,719	-		DZA65_RS18115	0.23	+1.6
3,898,884	+		DZA65_RS18115	0.40	-0.2
3,898,884	+		DZA65_RS18115	0.40	-0.1
3,898,884	+		DZA65_RS18115	0.40	-1.2
3,898,885	-		DZA65_RS18115	0.41	-0.2
3,898,946	+		DZA65_RS18115	0.47	-1.0
3,898,946	+		DZA65_RS18115	0.47	-0.7
3,898,947	-		DZA65_RS18115	0.47	-1.4
3,898,964	+		DZA65_RS18115	0.49	-0.3
3,898,964	+		DZA65_RS18115	0.49	-0.1
3,898,964	+		DZA65_RS18115	0.49	-1.0
3,898,964	+		DZA65_RS18115	0.49	-2.0
3,898,964	+		DZA65_RS18115	0.49	+0.4
3,898,964	+		DZA65_RS18115	0.49	+1.0
3,898,965	-		DZA65_RS18115	0.49	-0.9
3,898,965	-				-0.4
3,898,965	-		DZA65_RS18115	0.49	+0.0
3,899,052	+		DZA65_RS18115	0.58	-0.7
3,899,125	+		DZA65_RS18115	0.65	-0.5
3,899,125	+		DZA65_RS18115	0.65	-1.4
3,899,125	+		DZA65_RS18115	0.65	+0.8
3,899,126	-		DZA65_RS18115	0.65	-0.7
3,899,128	+		DZA65_RS18115	0.65	-0.6
3,899,129	-		DZA65_RS18115	0.66	+0.6
3,899,129	-		DZA65_RS18115	0.66	-1.7
3,899,129	-		DZA65_RS18115	0.66	-0.7
3,899,129	-		DZA65_RS18115	0.66	+0.9
3,899,129	-		DZA65_RS18115	0.66	-0.8
3,899,131	+		DZA65_RS18115	0.66	-1.0
3,899,143	+		DZA65_RS18115	0.67	-1.3
3,899,143	+		DZA65_RS18115	0.67	-0.4
3,899,167	+		DZA65_RS18115	0.69	-0.3
3,899,167	+		DZA65_RS18115	0.69	-0.1
3,899,167	+		DZA65_RS18115	0.69	-1.6
3,899,167	+		DZA65_RS18115	0.69	-0.4
3,899,167	+		DZA65_RS18115	0.69	+0.9
3,899,167	+		DZA65_RS18115	0.69	-1.2
3,899,168	-		DZA65_RS18115	0.70	+0.0
3,899,168	-		DZA65_RS18115	0.70	-0.6
3,899,168	-		DZA65_RS18115	0.70	-0.5
3,899,168	-		DZA65_RS18115	0.70	-0.6
3,899,223	+		DZA65_RS18115	0.75	-0.6
3,899,224	-		DZA65_RS18115	0.75	-0.4
3,899,224	-		DZA65_RS18115	0.75	+0.6
3,899,224	-		DZA65_RS18115	0.75	-1.0