Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18055

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,882,993	-		DZA65_RS18045	0.61	+1.2
3,883,274	-				-0.9
3,883,274	-				-0.1
3,883,280	-				-1.7
3,883,280	-				-1.7
3,883,280	-				-1.0
3,883,280	-				-2.0
3,883,280	-				-1.9
3,883,280	-				+0.6
3,883,280	-				-0.9
3,883,601	-				-1.6
3,883,643	-				+0.0
3,883,643	-				+0.8
3,883,807	+				-0.8
3,883,807	+				-1.2
3,883,807	+				-1.1
3,883,808	-				+0.3
3,883,808	-				+0.3
3,883,808	-				-1.2
3,883,808	-				-2.1
3,883,820	+				-1.7
3,883,820	+				-0.5
3,883,820	+				+2.2
3,883,820	+				-1.7
3,883,820	+				-0.2
3,883,821	-				-0.4
3,883,821	-				-1.2
3,883,821	-				-0.6
3,883,837	+				-0.4
3,883,946	+		DZA65_RS18055	0.31	-0.2
3,883,957	-		DZA65_RS18055	0.34	+0.2
3,883,996	+		DZA65_RS18055	0.45	-0.4
3,883,996	+		DZA65_RS18055	0.45	-1.0
3,883,996	+		DZA65_RS18055	0.45	-0.6
3,883,997	-		DZA65_RS18055	0.45	-1.0
3,883,997	-		DZA65_RS18055	0.45	+0.3
3,883,997	-		DZA65_RS18055	0.45	-0.2
3,883,997	-		DZA65_RS18055	0.45	+0.2
3,884,029	+		DZA65_RS18055	0.55	-0.8
3,884,030	-		DZA65_RS18055	0.55	-1.4
3,884,030	-		DZA65_RS18055	0.55	-0.7
3,884,030	-		DZA65_RS18055	0.55	+0.2
3,884,030	-		DZA65_RS18055	0.55	+0.6
3,884,062	+		DZA65_RS18055	0.64	-0.2
3,884,063	-		DZA65_RS18055	0.64	+0.5
3,884,063	-		DZA65_RS18055	0.64	+0.4
3,884,128	+		DZA65_RS18055	0.82	+0.0
3,884,129	-		DZA65_RS18055	0.83	-0.6
3,884,129	-		DZA65_RS18055	0.83	+0.5
3,884,144	-		DZA65_RS18055	0.87	-1.3
3,884,144	-				+1.0
3,884,156	+				+0.0
3,884,156	+				-0.3
3,884,157	-				-1.0
3,884,162	+				-0.3
3,884,163	-				-2.6
3,884,169	+				+1.6
3,884,170	-				-0.2
3,884,205	-				-1.3
3,884,205	-				-0.4
3,884,205	-				+0.3
3,884,280	+				-1.0
3,884,280	+				-1.0
3,884,280	+				-0.7
3,884,280	+				-1.8
3,884,281	-				-1.4
3,884,281	-				+0.5
3,884,281	-				-0.5
3,884,281	-				-0.5
3,884,312	+				+1.4
3,884,312	+				+1.2
3,884,312	+				+0.8
3,884,313	-				+0.0
3,884,313	-				-0.5
3,884,313	-				-1.6
3,884,313	-				-0.4
3,884,313	-				-0.8
3,884,320	-				+0.0
3,884,320	-				-1.4
3,884,320	-				+0.6
3,884,337	+				-1.4
3,884,337	+				-0.3
3,884,337	+				+0.4
3,884,338	-				-0.8
3,884,338	-				+0.3
3,884,338	-				-1.5
3,884,338	-				-0.6
3,884,338	-				+2.6
3,884,341	+				+0.8
3,884,341	+				-0.4
3,884,341	+				-1.0
3,884,341	+				-0.3
3,884,341	+				-1.6
3,884,344	+				-0.4
3,884,345	-				-0.6
3,884,414	+		DZA65_RS18060	0.17	+0.9
3,884,415	-		DZA65_RS18060	0.17	+0.3
3,884,415	-		DZA65_RS18060	0.17	+1.2
3,884,470	+		DZA65_RS18060	0.25	+0.9
3,884,470	+		DZA65_RS18060	0.25	-0.0
3,884,471	-		DZA65_RS18060	0.26	-0.6
3,884,590	-		DZA65_RS18060	0.45	-1.2
3,884,602	+		DZA65_RS18060	0.47	-1.2
3,884,603	-		DZA65_RS18060	0.47	+0.8
3,884,603	-		DZA65_RS18060	0.47	+1.0
3,884,732	+		DZA65_RS18060	0.67	-1.5
3,884,732	+		DZA65_RS18060	0.67	-0.6
3,884,732	+		DZA65_RS18060	0.67	-1.4
3,884,732	+		DZA65_RS18060	0.67	+1.1
3,884,733	-		DZA65_RS18060	0.68	-2.3
3,884,733	-		DZA65_RS18060	0.68	-1.7
3,884,733	-		DZA65_RS18060	0.68	-0.2
3,884,733	-		DZA65_RS18060	0.68	-2.0
3,884,733	-		DZA65_RS18060	0.68	-1.0
3,884,733	-		DZA65_RS18060	0.68	-1.0
3,884,733	-		DZA65_RS18060	0.68	-0.4
3,884,733	-		DZA65_RS18060	0.68	-0.4
3,884,887	+				-0.7
3,884,887	+				-1.7
3,884,887	+				-0.6
3,884,887	+				+0.0
3,884,887	+				+0.3
3,884,887	+				-2.7
3,884,887	+				-1.2
3,884,887	+				-0.6
3,884,888	-				+0.0
3,884,888	-				+0.0
3,884,888	-				+0.6
3,884,888	-				-0.1
3,884,888	-				-0.6
3,884,888	-				-0.6
3,884,888	-				+0.6
3,884,888	-				+0.6
3,884,888	-				-2.0
3,884,888	-				-0.8
3,884,888	-				+2.0
3,884,888	-				+0.0
3,884,937	+				+1.6
3,884,938	-				-0.7
3,885,022	-				+1.0
3,885,139	-		DZA65_RS18065	0.14	+0.5
3,885,139	-		DZA65_RS18065	0.14	-2.1
3,885,139	-		DZA65_RS18065	0.14	+0.8