Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17985

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,871,047	-				-0.3
3,871,047	-				-0.3
3,871,049	-				-2.1
3,871,049	-				-0.2
3,871,052	-				-0.7
3,871,052	-				-0.2
3,871,052	-				-0.0
3,871,052	-				+0.6
3,871,052	-				+1.1
3,871,052	-				-0.3
3,871,223	+				-0.5
3,871,252	+				-0.5
3,871,253	-				+0.8
3,871,271	-				+1.6
3,871,392	+		DZA65_RS17985	0.30	-1.0
3,871,394	+		DZA65_RS17985	0.30	-0.7
3,871,395	-		DZA65_RS17985	0.31	-0.4
3,871,395	-		DZA65_RS17985	0.31	-0.8
3,871,520	+		DZA65_RS17985	0.53	+1.0
3,871,520	+		DZA65_RS17985	0.53	-1.2
3,871,521	-		DZA65_RS17985	0.53	-1.3
3,871,521	-		DZA65_RS17985	0.53	-0.4
3,871,780	-				+0.0
3,871,790	+				-1.0
3,871,790	+				-1.2
3,871,811	-				-1.6
3,871,811	-				-0.2
3,871,825	-				-0.5
3,871,825	-				-1.6
3,871,925	+				-1.6
3,871,926	-				-0.2
3,871,926	-				-2.1
3,871,926	-				-1.1
3,871,968	+				+1.0
3,871,968	+				-1.2
3,871,989	+				-0.3
3,871,990	-				-0.1
3,872,069	-				-0.8
3,872,069	-				-0.7
3,872,097	+		DZA65_RS17990	0.12	+2.0
3,872,097	+		DZA65_RS17990	0.12	-1.0
3,872,097	+		DZA65_RS17990	0.12	-1.0
3,872,153	+		DZA65_RS17990	0.18	-0.6
3,872,153	+		DZA65_RS17990	0.18	-1.7
3,872,153	+		DZA65_RS17990	0.18	+0.0
3,872,153	+		DZA65_RS17990	0.18	-1.2
3,872,153	+		DZA65_RS17990	0.18	-1.0
3,872,154	-		DZA65_RS17990	0.18	+0.3
3,872,154	-		DZA65_RS17990	0.18	-2.8
3,872,154	-		DZA65_RS17990	0.18	-0.4
3,872,154	-		DZA65_RS17990	0.18	-1.1
3,872,154	-		DZA65_RS17990	0.18	+0.9
3,872,154	-		DZA65_RS17990	0.18	+0.6
3,872,259	+		DZA65_RS17990	0.28	+0.0
3,872,259	+		DZA65_RS17990	0.28	-1.0
3,872,259	+		DZA65_RS17990	0.28	-1.1
3,872,259	+		DZA65_RS17990	0.28	+0.0
3,872,259	+		DZA65_RS17990	0.28	+1.4
3,872,259	+		DZA65_RS17990	0.28	-0.8
3,872,260	-		DZA65_RS17990	0.28	-2.6
3,872,260	-		DZA65_RS17990	0.28	-1.6
3,872,260	-		DZA65_RS17990	0.28	-1.6
3,872,260	-		DZA65_RS17990	0.28	+0.4
3,872,260	-				+2.2
3,872,260	-		DZA65_RS17990	0.28	+0.0
3,872,260	-		DZA65_RS17990	0.28	-0.9
3,872,264	+		DZA65_RS17990	0.29	-1.2
3,872,264	+		DZA65_RS17990	0.29	+0.4
3,872,265	-		DZA65_RS17990	0.29	-0.2
3,872,332	+		DZA65_RS17990	0.35	-0.1
3,872,332	+		DZA65_RS17990	0.35	+0.4
3,872,332	+		DZA65_RS17990	0.35	-0.6
3,872,332	+		DZA65_RS17990	0.35	-0.7
3,872,502	+		DZA65_RS17990	0.52	+0.6
3,872,502	+		DZA65_RS17990	0.52	+0.3
3,872,502	+		DZA65_RS17990	0.52	-3.3
3,872,502	+		DZA65_RS17990	0.52	-1.4
3,872,503	-		DZA65_RS17990	0.52	+1.1
3,872,503	-		DZA65_RS17990	0.52	-1.2
3,872,503	-		DZA65_RS17990	0.52	-1.4
3,872,559	+		DZA65_RS17990	0.57	-0.6
3,872,559	+		DZA65_RS17990	0.57	+0.3
3,872,560	-		DZA65_RS17990	0.57	+0.3
3,872,560	-		DZA65_RS17990	0.57	-0.8
3,872,586	+		DZA65_RS17990	0.60	-0.3
3,872,586	+		DZA65_RS17990	0.60	-0.7
3,872,586	+		DZA65_RS17990	0.60	-1.6
3,872,586	+		DZA65_RS17990	0.60	-1.8
3,872,586	+		DZA65_RS17990	0.60	-1.2
3,872,587	-		DZA65_RS17990	0.60	-2.4
3,872,587	-		DZA65_RS17990	0.60	+1.6
3,872,587	-		DZA65_RS17990	0.60	-0.6
3,872,587	-		DZA65_RS17990	0.60	-1.2
3,872,587	-		DZA65_RS17990	0.60	-1.3
3,872,637	+		DZA65_RS17990	0.65	-0.2
3,872,725	+		DZA65_RS17990	0.73	-0.5
3,872,726	-		DZA65_RS17990	0.73	-1.7
3,872,779	-		DZA65_RS17990	0.78	+1.4