Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17835

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,837,980	+		DZA65_RS17830	0.46	+0.2
3,837,981	-		DZA65_RS17830	0.46	+1.3
3,837,981	-		DZA65_RS17830	0.46	+0.9
3,837,996	-		DZA65_RS17830	0.47	-2.1
3,837,996	-		DZA65_RS17830	0.47	-0.1
3,837,996	-		DZA65_RS17830	0.47	+0.9
3,838,140	+		DZA65_RS17830	0.56	-1.0
3,838,140	+		DZA65_RS17830	0.56	+0.8
3,838,140	+		DZA65_RS17830	0.56	-0.3
3,838,140	+		DZA65_RS17830	0.56	+0.8
3,838,140	+		DZA65_RS17830	0.56	-1.0
3,838,140	+		DZA65_RS17830	0.56	+0.0
3,838,140	+		DZA65_RS17830	0.56	+1.1
3,838,140	+		DZA65_RS17830	0.56	+0.4
3,838,140	+		DZA65_RS17830	0.56	-0.4
3,838,140	+		DZA65_RS17830	0.56	-1.2
3,838,140	+		DZA65_RS17830	0.56	-1.4
3,838,140	+		DZA65_RS17830	0.56	-0.3
3,838,140	+		DZA65_RS17830	0.56	-0.8
3,838,140	+		DZA65_RS17830	0.56	-1.0
3,838,140	+		DZA65_RS17830	0.56	-0.8
3,838,140	+		DZA65_RS17830	0.56	-0.7
3,838,140	+		DZA65_RS17830	0.56	-1.2
3,838,140	+		DZA65_RS17830	0.56	-1.1
3,838,140	+		DZA65_RS17830	0.56	-1.8
3,838,141	-		DZA65_RS17830	0.56	-1.0
3,838,141	-		DZA65_RS17830	0.56	-0.5
3,838,141	-		DZA65_RS17830	0.56	-0.5
3,838,141	-		DZA65_RS17830	0.56	-0.2
3,838,141	-		DZA65_RS17830	0.56	+0.2
3,838,141	-		DZA65_RS17830	0.56	-1.0
3,838,141	-		DZA65_RS17830	0.56	+0.4
3,838,141	-		DZA65_RS17830	0.56	-1.4
3,838,141	-		DZA65_RS17830	0.56	+0.0
3,838,173	-		DZA65_RS17830	0.58	+0.0
3,838,332	+		DZA65_RS17830	0.68	+0.2
3,838,332	+		DZA65_RS17830	0.68	-1.0
3,838,332	+		DZA65_RS17830	0.68	-0.3
3,838,332	+		DZA65_RS17830	0.68	-0.4
3,838,332	+		DZA65_RS17830	0.68	+0.2
3,838,333	-		DZA65_RS17830	0.68	+0.3
3,838,333	-		DZA65_RS17830	0.68	+0.6
3,838,333	-		DZA65_RS17830	0.68	+1.9
3,838,506	+		DZA65_RS17830	0.79	-1.2
3,838,506	+		DZA65_RS17830	0.79	+0.1
3,838,506	+		DZA65_RS17830	0.79	-1.0
3,838,506	+		DZA65_RS17830	0.79	-2.3
3,838,507	-		DZA65_RS17830	0.79	+0.0
3,838,507	-				+0.6
3,838,507	-		DZA65_RS17830	0.79	-0.7
3,838,507	-		DZA65_RS17830	0.79	-1.6
3,838,507	-		DZA65_RS17830	0.79	+0.4
3,838,507	-		DZA65_RS17830	0.79	-0.7
3,838,507	-		DZA65_RS17830	0.79	+2.0
3,838,781	+				+0.4
3,838,781	+				+0.9
3,838,833	+				+0.6
3,838,834	-				+0.8
3,838,842	+				+0.0
3,838,843	-				-0.6
3,838,852	+				+1.0
3,838,853	-				-0.4
3,838,853	-				-1.6
3,838,853	-				-0.8
3,838,853	-				-1.3
3,838,867	+				+0.1
3,838,920	+		DZA65_RS17835	0.20	-0.2
3,838,920	+		DZA65_RS17835	0.20	-1.2
3,838,920	+		DZA65_RS17835	0.20	-1.1
3,838,921	-		DZA65_RS17835	0.20	-0.7
3,838,985	+		DZA65_RS17835	0.53	-1.6
3,838,986	-		DZA65_RS17835	0.53	-0.7
3,838,986	-		DZA65_RS17835	0.53	-0.6
3,839,180	+				-2.2
3,839,180	+				-1.6
3,839,181	-				-1.5
3,839,181	-				-0.3
3,839,181	-				-1.2
3,839,201	+				-0.2
3,839,201	+				-1.6
3,839,202	-				-0.2
3,839,202	-				-0.4
3,839,456	+		DZA65_RS17840	0.27	+0.6
3,839,456	+		DZA65_RS17840	0.27	+0.3
3,839,456	+		DZA65_RS17840	0.27	+0.2
3,839,457	-		DZA65_RS17840	0.27	+0.4
3,839,457	-		DZA65_RS17840	0.27	-0.6
3,839,462	+		DZA65_RS17840	0.27	-1.0
3,839,470	+		DZA65_RS17840	0.28	+1.6
3,839,470	+		DZA65_RS17840	0.28	-0.5
3,839,470	+		DZA65_RS17840	0.28	-0.4
3,839,489	+		DZA65_RS17840	0.29	-0.5
3,839,671	-		DZA65_RS17840	0.42	-0.1
3,839,756	+		DZA65_RS17840	0.48	-0.2
3,839,756	+		DZA65_RS17840	0.48	-2.6
3,839,757	-		DZA65_RS17840	0.48	+0.0
3,839,757	-		DZA65_RS17840	0.48	-0.4
3,839,757	-		DZA65_RS17840	0.48	-0.2
3,839,757	-		DZA65_RS17840	0.48	-0.2
3,839,757	-		DZA65_RS17840	0.48	-1.3
3,839,757	-		DZA65_RS17840	0.48	-0.7
3,839,757	-		DZA65_RS17840	0.48	-1.0
3,839,757	-		DZA65_RS17840	0.48	-0.1
3,839,873	+		DZA65_RS17840	0.56	+1.1
3,839,874	-		DZA65_RS17840	0.57	+0.0
3,839,914	-		DZA65_RS17840	0.59	+2.2
3,839,934	+		DZA65_RS17840	0.61	-1.2
3,839,935	-		DZA65_RS17840	0.61	-0.4
3,839,992	+		DZA65_RS17840	0.65	+0.4
3,839,993	-		DZA65_RS17840	0.65	+0.6
3,840,023	+		DZA65_RS17840	0.67	-0.4
3,840,024	-		DZA65_RS17840	0.67	-0.3