Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17800

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,830,781	+		DZA65_RS17795	0.21	-0.1
3,830,781	+		DZA65_RS17795	0.21	-0.2
3,830,781	+		DZA65_RS17795	0.21	+0.7
3,830,782	-		DZA65_RS17795	0.21	+0.6
3,830,970	+		DZA65_RS17795	0.36	-0.0
3,831,091	+		DZA65_RS17795	0.45	-0.2
3,831,091	+		DZA65_RS17795	0.45	-0.7
3,831,091	+		DZA65_RS17795	0.45	-0.4
3,831,091	+		DZA65_RS17795	0.45	-0.1
3,831,091	+		DZA65_RS17795	0.45	+0.4
3,831,091	+		DZA65_RS17795	0.45	+0.0
3,831,092	-		DZA65_RS17795	0.45	-0.4
3,831,175	+		DZA65_RS17795	0.52	-1.3
3,831,175	+		DZA65_RS17795	0.52	+0.0
3,831,175	+		DZA65_RS17795	0.52	-1.0
3,831,189	+		DZA65_RS17795	0.53	-0.1
3,831,189	+		DZA65_RS17795	0.53	-1.0
3,831,190	-		DZA65_RS17795	0.53	+0.3
3,831,413	+		DZA65_RS17795	0.71	+0.9
3,831,413	+				+2.2
3,831,413	+		DZA65_RS17795	0.71	+1.6
3,831,414	-		DZA65_RS17795	0.71	+1.6
3,831,414	-		DZA65_RS17795	0.71	-0.4
3,831,414	-				+0.3
3,831,414	-		DZA65_RS17795	0.71	+3.2
3,831,414	-		DZA65_RS17795	0.71	-1.0
3,831,553	-		DZA65_RS17795	0.82	-2.5
3,831,565	+		DZA65_RS17795	0.83	+0.1
3,831,565	+		DZA65_RS17795	0.83	+0.0
3,831,566	-		DZA65_RS17795	0.83	+0.3
3,831,566	-		DZA65_RS17795	0.83	-2.2
3,831,566	-		DZA65_RS17795	0.83	-2.5
3,831,569	-		DZA65_RS17795	0.83	+0.2
3,831,657	+		DZA65_RS17795	0.90	-0.8
3,831,658	-				-0.6
3,831,658	-				-0.1
3,831,658	-				+1.0
3,831,658	-				+0.3
3,831,806	+				+1.6
3,831,806	+				+0.3
3,831,806	+				+0.9
3,831,806	+				+0.2
3,831,806	+				-1.2
3,831,806	+				+0.0
3,831,806	+				+0.0
3,831,806	+				-0.1
3,831,807	-				+1.6
3,831,807	-				-1.4
3,831,807	-				-0.8
3,831,807	-				+2.2
3,831,920	+		DZA65_RS17800	0.11	-1.3
3,831,920	+		DZA65_RS17800	0.11	-1.0
3,831,921	-		DZA65_RS17800	0.11	+0.1
3,831,921	-		DZA65_RS17800	0.11	+1.2
3,832,085	+		DZA65_RS17800	0.24	+0.5
3,832,086	-		DZA65_RS17800	0.24	-0.7
3,832,153	-		DZA65_RS17800	0.30	-0.1
3,832,180	-		DZA65_RS17800	0.32	-0.7
3,832,180	-		DZA65_RS17800	0.32	+0.3
3,832,284	-		DZA65_RS17800	0.40	+0.2
3,832,284	-		DZA65_RS17800	0.40	-1.4
3,832,284	-		DZA65_RS17800	0.40	-1.6
3,832,292	+		DZA65_RS17800	0.41	-0.8
3,832,292	+		DZA65_RS17800	0.41	-0.8
3,832,292	+		DZA65_RS17800	0.41	+0.6
3,832,292	+		DZA65_RS17800	0.41	-0.4
3,832,293	-		DZA65_RS17800	0.41	-0.6
3,832,345	+		DZA65_RS17800	0.45	+0.8
3,832,345	+		DZA65_RS17800	0.45	-0.0
3,832,353	+		DZA65_RS17800	0.46	+0.6
3,832,353	+		DZA65_RS17800	0.46	+0.4
3,832,354	-		DZA65_RS17800	0.46	+0.2
3,832,354	-		DZA65_RS17800	0.46	+0.6
3,832,354	-		DZA65_RS17800	0.46	-0.1
3,832,354	-		DZA65_RS17800	0.46	-1.3
3,832,354	-		DZA65_RS17800	0.46	-1.2
3,832,377	+		DZA65_RS17800	0.48	-0.8
3,832,377	+				+0.6
3,832,378	-		DZA65_RS17800	0.48	+0.2
3,832,378	-		DZA65_RS17800	0.48	+0.4
3,832,509	+		DZA65_RS17800	0.58	-0.1
3,832,510	-		DZA65_RS17800	0.59	+0.2
3,832,511	+		DZA65_RS17800	0.59	-1.1
3,832,512	-		DZA65_RS17800	0.59	-0.6
3,832,512	-		DZA65_RS17800	0.59	+1.4
3,832,512	-		DZA65_RS17800	0.59	-1.2
3,832,539	+		DZA65_RS17800	0.61	-1.2
3,832,539	+		DZA65_RS17800	0.61	+0.6
3,832,539	+		DZA65_RS17800	0.61	+0.6
3,832,540	-		DZA65_RS17800	0.61	-1.6
3,832,636	+		DZA65_RS17800	0.69	+0.8
3,832,636	+		DZA65_RS17800	0.69	-0.6
3,832,636	+		DZA65_RS17800	0.69	-0.7
3,832,637	-		DZA65_RS17800	0.69	+0.8
3,832,637	-		DZA65_RS17800	0.69	+0.9
3,832,637	-		DZA65_RS17800	0.69	-0.2
3,832,637	-		DZA65_RS17800	0.69	-0.4
3,832,637	-		DZA65_RS17800	0.69	+0.6
3,832,637	-		DZA65_RS17800	0.69	-0.8
3,832,637	-		DZA65_RS17800	0.69	-0.2
3,832,637	-		DZA65_RS17800	0.69	+0.0
3,832,637	-		DZA65_RS17800	0.69	-0.6
3,832,862	+		DZA65_RS17800	0.87	+0.2
3,832,862	+		DZA65_RS17800	0.87	-0.5
3,832,862	+		DZA65_RS17800	0.87	+1.6
3,832,862	+		DZA65_RS17800	0.87	-0.3
3,832,862	+		DZA65_RS17800	0.87	+0.4
3,832,887	-		DZA65_RS17800	0.89	+0.3
3,832,907	+				+1.2
3,832,908	-				-1.8
3,832,908	-				-0.1
3,832,908	-				+0.7
3,832,908	-				+0.3
3,832,908	-				-2.9
3,832,908	-				+0.6
3,832,942	+				-0.3
3,832,943	-				-0.4
3,832,943	-				-1.0
3,832,943	-				-0.2
3,832,943	-				+0.2
3,833,020	-				-0.4
3,833,056	+				-0.8
3,833,056	+				-0.3
3,833,057	-				-0.2
3,833,057	-				+0.0
3,833,057	-				-0.4
3,833,057	-				-0.1
3,833,057	-				-1.4
3,833,089	+				-0.5
3,833,159	+				-1.1
3,833,159	+				-0.2
3,833,159	+				-0.4
3,833,159	+				-1.4
3,833,160	-				-1.7
3,833,208	+		DZA65_RS17805	0.16	+0.0
3,833,325	+		DZA65_RS17805	0.32	-0.7
3,833,325	+		DZA65_RS17805	0.32	+0.5
3,833,325	+		DZA65_RS17805	0.32	+0.4
3,833,416	+		DZA65_RS17805	0.45	+0.6
3,833,416	+		DZA65_RS17805	0.45	+1.6
3,833,419	+		DZA65_RS17805	0.45	-0.7
3,833,419	+		DZA65_RS17805	0.45	-1.1
3,833,419	+		DZA65_RS17805	0.45	-0.3
3,833,420	-		DZA65_RS17805	0.45	-1.0
3,833,420	-		DZA65_RS17805	0.45	-1.7
3,833,493	-		DZA65_RS17805	0.55	+0.8
3,833,493	-		DZA65_RS17805	0.55	-0.2
3,833,621	+		DZA65_RS17805	0.73	-2.6
3,833,621	+		DZA65_RS17805	0.73	+0.7
3,833,621	+		DZA65_RS17805	0.73	+0.4
3,833,621	+		DZA65_RS17805	0.73	+1.2
3,833,656	+		DZA65_RS17805	0.78	+2.4
3,833,656	+		DZA65_RS17805	0.78	-1.0
3,833,690	+		DZA65_RS17805	0.82	-1.7
3,833,691	-		DZA65_RS17805	0.82	+0.0
3,833,691	-		DZA65_RS17805	0.82	-1.4
3,833,782	+				-1.4
3,833,785	+				+0.4
3,833,785	+				-1.2
3,833,785	+				+2.2
3,833,786	-				+0.0
3,833,786	-				+0.2
3,833,786	-				+0.5
3,833,786	-				-0.3
3,833,786	-				-1.6
3,833,786	-				-0.8
3,833,789	+				-0.5
3,833,789	+				-0.5
3,833,789	+				-0.9
3,833,789	+				+0.4
3,833,789	+				+0.6
3,833,789	+				+0.6
3,833,789	+				-1.0
3,833,789	+				-0.6
3,833,790	-				+0.6
3,833,790	-				-0.0
3,833,790	-				-1.4
3,833,846	+				+0.0
3,833,846	+				+2.0
3,833,846	+				-0.7
3,833,847	-				+0.0
3,833,847	-				-0.3
3,833,847	-				-0.1
3,833,847	-				-0.4
3,833,847	-				-1.0
3,833,850	-				-0.2
3,833,850	-				+0.6
3,833,850	-				-0.8
3,833,850	-				-0.9
3,833,850	-				+0.0
3,833,850	-				-2.8
3,833,861	+				+0.6
3,833,862	-				-1.0
3,833,877	-		DZA65_RS17810	0.12	-0.7
3,833,877	-		DZA65_RS17810	0.12	-0.2
3,833,899	+		DZA65_RS17810	0.15	+1.4
3,833,899	+		DZA65_RS17810	0.15	-1.7
3,833,900	-		DZA65_RS17810	0.15	-2.8
3,833,900	-		DZA65_RS17810	0.15	-0.1
3,833,926	-		DZA65_RS17810	0.19	-1.4