Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS16155

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,498,682	+		DZA65_RS16150	0.23	+1.5
3,498,683	-		DZA65_RS16150	0.24	-0.6
3,498,683	-		DZA65_RS16150	0.24	+0.3
3,498,740	-		DZA65_RS16150	0.29	+1.0
3,498,772	+		DZA65_RS16150	0.33	-0.5
3,498,772	+		DZA65_RS16150	0.33	-0.3
3,498,773	-		DZA65_RS16150	0.33	-1.0
3,498,775	+		DZA65_RS16150	0.33	+0.1
3,498,776	-		DZA65_RS16150	0.33	-2.0
3,498,829	+		DZA65_RS16150	0.39	-1.3
3,498,829	+		DZA65_RS16150	0.39	+0.9
3,498,830	-		DZA65_RS16150	0.39	-0.2
3,498,844	+		DZA65_RS16150	0.40	+1.2
3,498,844	+				+2.5
3,498,844	+		DZA65_RS16150	0.40	-0.2
3,498,844	+		DZA65_RS16150	0.40	-2.7
3,498,845	-		DZA65_RS16150	0.40	+0.4
3,498,845	-		DZA65_RS16150	0.40	+0.5
3,498,853	+		DZA65_RS16150	0.41	-1.8
3,498,853	+		DZA65_RS16150	0.41	-1.0
3,498,854	-		DZA65_RS16150	0.41	+0.1
3,498,854	-		DZA65_RS16150	0.41	-1.6
3,498,874	+		DZA65_RS16150	0.43	-0.0
3,498,934	+		DZA65_RS16150	0.50	-0.3
3,498,935	-		DZA65_RS16150	0.50	-1.5
3,498,935	-		DZA65_RS16150	0.50	-0.3
3,498,935	-		DZA65_RS16150	0.50	+0.5
3,498,935	-		DZA65_RS16150	0.50	-1.7
3,498,935	-		DZA65_RS16150	0.50	+0.4
3,498,957	+		DZA65_RS16150	0.52	-0.4
3,499,014	-		DZA65_RS16150	0.58	-0.5
3,499,019	+		DZA65_RS16150	0.58	+1.1
3,499,019	+		DZA65_RS16150	0.58	-0.0
3,499,019	+		DZA65_RS16150	0.58	+0.9
3,499,019	+		DZA65_RS16150	0.58	-1.0
3,499,020	-		DZA65_RS16150	0.59	-0.5
3,499,039	+		DZA65_RS16150	0.61	+0.7
3,499,039	+		DZA65_RS16150	0.61	-0.2
3,499,049	+		DZA65_RS16150	0.62	+0.4
3,499,049	+		DZA65_RS16150	0.62	-1.9
3,499,050	-		DZA65_RS16150	0.62	-1.9
3,499,051	+		DZA65_RS16150	0.62	+0.2
3,499,051	+		DZA65_RS16150	0.62	-0.7
3,499,051	+		DZA65_RS16150	0.62	-1.3
3,499,051	+		DZA65_RS16150	0.62	+0.4
3,499,051	+		DZA65_RS16150	0.62	+0.2
3,499,051	+		DZA65_RS16150	0.62	-1.6
3,499,051	+		DZA65_RS16150	0.62	-0.6
3,499,052	-		DZA65_RS16150	0.62	-1.0
3,499,052	-		DZA65_RS16150	0.62	+0.7
3,499,097	+		DZA65_RS16150	0.67	+0.1
3,499,097	+		DZA65_RS16150	0.67	-0.8
3,499,097	+		DZA65_RS16150	0.67	-0.6
3,499,098	-		DZA65_RS16150	0.67	-0.5
3,499,098	-		DZA65_RS16150	0.67	+0.2
3,499,099	+		DZA65_RS16150	0.67	+0.8
3,499,099	+		DZA65_RS16150	0.67	+0.1
3,499,099	+		DZA65_RS16150	0.67	-0.0
3,499,099	+		DZA65_RS16150	0.67	-0.5
3,499,099	+		DZA65_RS16150	0.67	+0.4
3,499,099	+		DZA65_RS16150	0.67	-0.5
3,499,100	-		DZA65_RS16150	0.67	-0.5
3,499,100	-		DZA65_RS16150	0.67	-0.5
3,499,100	-		DZA65_RS16150	0.67	-0.5
3,499,100	-		DZA65_RS16150	0.67	-1.0
3,499,100	-		DZA65_RS16150	0.67	-0.6
3,499,143	+		DZA65_RS16150	0.71	-1.9
3,499,143	+		DZA65_RS16150	0.71	-1.5
3,499,157	+		DZA65_RS16150	0.73	-1.0
3,499,157	+		DZA65_RS16150	0.73	+0.5
3,499,158	-		DZA65_RS16150	0.73	-0.9
3,499,161	+		DZA65_RS16150	0.73	-1.0
3,499,227	-		DZA65_RS16150	0.80	-0.0
3,499,249	+		DZA65_RS16150	0.82	+0.5
3,499,249	+		DZA65_RS16150	0.82	-0.0
3,499,250	-		DZA65_RS16150	0.82	+0.7
3,499,268	+		DZA65_RS16150	0.84	+0.5
3,499,268	+		DZA65_RS16150	0.84	+0.2
3,499,268	+		DZA65_RS16150	0.84	-0.7
3,499,269	-		DZA65_RS16150	0.84	-1.2
3,499,329	-				+0.8
3,499,373	+				+0.4
3,499,373	+				+0.2
3,499,374	-				-0.8
3,499,374	-				-1.2
3,499,398	+				-0.5
3,499,398	+				-0.3
3,499,398	+				-1.3
3,499,398	+				+0.1
3,499,398	+				-0.9
3,499,398	+				-2.1
3,499,398	+				+0.4
3,499,399	-				-0.5
3,499,399	-				-0.5
3,499,399	-				-0.8
3,499,399	-				-0.6
3,499,399	-				-0.6
3,499,472	+				-1.4
3,499,472	+				+0.9
3,499,506	+				-1.6
3,499,506	+				+0.5
3,499,537	+				+0.7
3,499,537	+				-1.2
3,499,537	+				-0.5
3,499,537	+				-1.0
3,499,537	+				-0.3
3,499,538	-				-1.0
3,499,538	-				+0.2
3,499,558	+				-0.3
3,499,577	+				-1.2
3,499,596	+				+1.3
3,499,596	+				-1.3
3,499,596	+				-1.0
3,499,596	+				-0.5
3,499,596	+				+0.1
3,499,596	+				-1.2
3,499,597	-				+0.1
3,499,597	-				+1.0
3,499,597	-				-3.0
3,499,609	-				-1.3
3,499,609	-				-0.3
3,499,621	+				-0.3
3,499,621	+				-0.3
3,499,621	+				-1.0
3,499,621	+				+0.2
3,499,622	-				-1.0
3,499,625	+				-0.4
3,499,625	+				-2.3
3,499,691	+				-0.9
3,499,766	+				+0.2
3,499,766	+				-2.6
3,499,767	-				-1.6
3,499,767	-				-2.5
3,499,767	-				-0.6
3,499,780	+				+0.2
3,499,804	-		DZA65_RS16155	0.11	-0.8
3,499,815	+		DZA65_RS16155	0.12	-0.8
3,499,816	-		DZA65_RS16155	0.12	+0.6
3,499,925	+		DZA65_RS16155	0.21	-2.0
3,499,925	+		DZA65_RS16155	0.21	+1.1
3,499,925	+		DZA65_RS16155	0.21	-0.3
3,499,926	-		DZA65_RS16155	0.22	-0.6
3,499,948	+		DZA65_RS16155	0.23	+0.8
3,499,949	-				-0.4
3,500,166	+		DZA65_RS16155	0.42	+0.7
3,500,166	+				-0.8
3,500,166	+		DZA65_RS16155	0.42	-2.4
3,500,166	+		DZA65_RS16155	0.42	-0.4
3,500,166	+		DZA65_RS16155	0.42	-1.0
3,500,166	+		DZA65_RS16155	0.42	-0.6
3,500,167	-		DZA65_RS16155	0.42	+0.6
3,500,167	-				-0.8
3,500,167	-		DZA65_RS16155	0.42	-0.0
3,500,167	-		DZA65_RS16155	0.42	-1.0
3,500,167	-		DZA65_RS16155	0.42	-2.2
3,500,167	-		DZA65_RS16155	0.42	+1.2
3,500,167	-		DZA65_RS16155	0.42	-0.9
3,500,171	+		DZA65_RS16155	0.42	-0.3
3,500,171	+		DZA65_RS16155	0.42	-1.8
3,500,172	-		DZA65_RS16155	0.42	-0.0
3,500,172	-		DZA65_RS16155	0.42	-0.2
3,500,220	+		DZA65_RS16155	0.46	+0.6
3,500,220	+		DZA65_RS16155	0.46	-0.8
3,500,220	+		DZA65_RS16155	0.46	-1.7
3,500,220	+		DZA65_RS16155	0.46	+0.2
3,500,220	+		DZA65_RS16155	0.46	-0.0
3,500,220	+		DZA65_RS16155	0.46	+1.1
3,500,221	-		DZA65_RS16155	0.47	-1.3
3,500,221	-		DZA65_RS16155	0.47	-0.4
3,500,221	-		DZA65_RS16155	0.47	+0.7
3,500,221	-		DZA65_RS16155	0.47	-0.8
3,500,244	+		DZA65_RS16155	0.48	+1.7
3,500,245	-		DZA65_RS16155	0.49	-0.4
3,500,245	-		DZA65_RS16155	0.49	-0.6
3,500,311	-		DZA65_RS16155	0.54	-1.4
3,500,388	+		DZA65_RS16155	0.61	-1.6
3,500,388	+		DZA65_RS16155	0.61	-0.6
3,500,518	-		DZA65_RS16155	0.72	-0.0
3,500,518	-		DZA65_RS16155	0.72	-2.8
3,500,527	-		DZA65_RS16155	0.72	-1.3
3,500,582	+		DZA65_RS16155	0.77	+0.2
3,500,583	-		DZA65_RS16155	0.77	-0.9
3,500,585	+		DZA65_RS16155	0.77	-0.0
3,500,621	+		DZA65_RS16155	0.80	-1.4
3,500,621	+		DZA65_RS16155	0.80	-1.9
3,500,766	-				-1.3
3,500,796	+				-1.5
3,500,796	+				-0.0
3,500,797	-				-1.4
3,500,797	-				-2.0
3,500,895	+				-1.0
3,500,895	+				+0.3
3,500,895	+				-0.9
3,500,896	-				-0.0
3,500,948	+				+0.2
3,500,948	+				-0.7
3,500,948	+				+0.4
3,500,948	+				-0.8
3,500,948	+				-1.0
3,500,948	+				+0.1
3,500,948	+				-0.2
3,500,948	+				-1.9
3,500,948	+				+0.6
3,500,949	-				-1.6
3,500,949	-				-0.0
3,500,949	-				+0.5
3,500,949	-				+0.4
3,500,949	-				-0.8
3,500,949	-				+0.7
3,500,949	-				-1.9
3,500,949	-				-0.8
3,500,949	-				-1.0
3,500,949	-				-0.8
3,500,949	-				+0.2
3,500,949	-				-0.9
3,500,949	-				-1.3
3,500,949	-				-1.4
3,500,957	+				+0.4
3,500,958	-				+0.9
3,500,995	+				-0.2
3,500,995	+				+0.6
3,500,995	+				-0.9
3,500,996	-				-0.0
3,500,998	+				-0.3
3,500,999	-				-0.6
3,501,004	-				-0.4
3,501,004	-				-1.1
3,501,006	+				-0.4
3,501,006	+				-1.1
3,501,006	+				+0.2
3,501,007	-				-1.3
3,501,026	+				+0.6
3,501,060	+				-0.7
3,501,060	+				-1.3
3,501,061	-				+1.0
3,501,064	+				+0.6
3,501,064	+				-1.1
3,501,065	-				+0.2
3,501,081	+				-0.5
3,501,081	+				-0.6
3,501,081	+				-0.4
3,501,082	-				-0.5
3,501,082	-				+1.1
3,501,110	-				+1.0
3,501,235	+		DZA65_RS16160	0.14	-0.2
3,501,236	-		DZA65_RS16160	0.14	-0.2
3,501,287	+		DZA65_RS16160	0.18	-0.0
3,501,287	+		DZA65_RS16160	0.18	-0.8
3,501,288	-		DZA65_RS16160	0.18	-0.9
3,501,288	-		DZA65_RS16160	0.18	-0.5
3,501,290	+		DZA65_RS16160	0.18	-0.3
3,501,290	+		DZA65_RS16160	0.18	+0.3
3,501,290	+		DZA65_RS16160	0.18	-0.3
3,501,290	+		DZA65_RS16160	0.18	-1.4
3,501,291	-		DZA65_RS16160	0.18	-0.6
3,501,291	-		DZA65_RS16160	0.18	+0.3
3,501,291	-		DZA65_RS16160	0.18	-1.9
3,501,336	+		DZA65_RS16160	0.22	+0.8
3,501,336	+		DZA65_RS16160	0.22	+0.8
3,501,336	+		DZA65_RS16160	0.22	-2.0
3,501,336	+		DZA65_RS16160	0.22	-0.8
3,501,337	-		DZA65_RS16160	0.22	-0.3
3,501,337	-		DZA65_RS16160	0.22	-1.4
3,501,340	+		DZA65_RS16160	0.22	+0.6
3,501,340	+		DZA65_RS16160	0.22	-0.3
3,501,340	+		DZA65_RS16160	0.22	-2.8
3,501,341	-		DZA65_RS16160	0.22	-0.1
3,501,341	-		DZA65_RS16160	0.22	+0.4
3,501,341	-		DZA65_RS16160	0.22	-0.7
3,501,341	-		DZA65_RS16160	0.22	-1.3
3,501,341	-		DZA65_RS16160	0.22	-0.0
3,501,341	-		DZA65_RS16160	0.22	-1.3
3,501,341	-		DZA65_RS16160	0.22	-0.2
3,501,438	+		DZA65_RS16160	0.30	-0.8
3,501,438	+		DZA65_RS16160	0.30	-0.0
3,501,438	+		DZA65_RS16160	0.30	-0.1
3,501,439	-		DZA65_RS16160	0.30	-0.2
3,501,590	+		DZA65_RS16160	0.42	+0.6
3,501,590	+		DZA65_RS16160	0.42	-0.3
3,501,591	-		DZA65_RS16160	0.42	-0.6
3,501,591	-		DZA65_RS16160	0.42	-0.9
3,501,639	+		DZA65_RS16160	0.46	+0.7
3,501,639	+		DZA65_RS16160	0.46	+0.2
3,501,640	-		DZA65_RS16160	0.46	+0.1
3,501,640	-		DZA65_RS16160	0.46	-1.2
3,501,640	-		DZA65_RS16160	0.46	-0.6
3,501,650	+		DZA65_RS16160	0.47	+0.1
3,501,713	+		DZA65_RS16160	0.52	-1.0
3,501,713	+		DZA65_RS16160	0.52	-1.4
3,501,713	+		DZA65_RS16160	0.52	+1.0
3,501,713	+		DZA65_RS16160	0.52	-1.0
3,501,713	+		DZA65_RS16160	0.52	-1.3
3,501,714	-		DZA65_RS16160	0.52	-0.8
3,501,714	-		DZA65_RS16160	0.52	-1.3
3,501,714	-		DZA65_RS16160	0.52	-1.4
3,501,714	-		DZA65_RS16160	0.52	-0.7
3,501,714	-		DZA65_RS16160	0.52	-0.6
3,501,714	-		DZA65_RS16160	0.52	-0.6
3,501,714	-		DZA65_RS16160	0.52	-1.3
3,501,730	+		DZA65_RS16160	0.54	-0.8