Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15795

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,429,456	-		DZA65_RS15785	0.40	-0.8
3,429,470	+		DZA65_RS15785	0.41	-1.2
3,429,470	+		DZA65_RS15785	0.41	-0.0
3,429,470	+		DZA65_RS15785	0.41	-2.0
3,429,470	+		DZA65_RS15785	0.41	+1.5
3,429,471	-		DZA65_RS15785	0.42	-2.3
3,429,471	-				+0.2
3,429,471	-		DZA65_RS15785	0.42	-0.0
3,429,471	-		DZA65_RS15785	0.42	-0.8
3,429,471	-		DZA65_RS15785	0.42	+0.1
3,429,567	+		DZA65_RS15785	0.50	-1.1
3,429,574	+		DZA65_RS15785	0.51	+0.5
3,429,574	+		DZA65_RS15785	0.51	-1.4
3,429,574	+		DZA65_RS15785	0.51	-0.3
3,429,574	+		DZA65_RS15785	0.51	-1.3
3,429,574	+		DZA65_RS15785	0.51	-2.5
3,429,574	+		DZA65_RS15785	0.51	+0.8
3,429,574	+		DZA65_RS15785	0.51	+0.1
3,429,575	-		DZA65_RS15785	0.51	-1.0
3,429,575	-		DZA65_RS15785	0.51	+0.4
3,429,575	-		DZA65_RS15785	0.51	+0.2
3,429,575	-		DZA65_RS15785	0.51	+0.3
3,429,575	-		DZA65_RS15785	0.51	+0.3
3,429,575	-		DZA65_RS15785	0.51	-1.8
3,429,575	-		DZA65_RS15785	0.51	-0.8
3,429,575	-		DZA65_RS15785	0.51	-1.1
3,429,575	-		DZA65_RS15785	0.51	-0.4
3,429,575	-		DZA65_RS15785	0.51	-0.4
3,429,575	-		DZA65_RS15785	0.51	-1.5
3,429,575	-		DZA65_RS15785	0.51	+0.8
3,429,575	-		DZA65_RS15785	0.51	+0.3
3,429,575	-		DZA65_RS15785	0.51	+0.4
3,429,629	+		DZA65_RS15785	0.56	-1.0
3,429,629	+		DZA65_RS15785	0.56	-1.0
3,429,673	+				+0.5
3,429,673	+		DZA65_RS15785	0.60	+0.2
3,429,674	-		DZA65_RS15785	0.60	-1.5
3,429,674	-		DZA65_RS15785	0.60	+0.7
3,429,676	+		DZA65_RS15785	0.60	-0.5
3,429,676	+		DZA65_RS15785	0.60	-0.5
3,429,676	+		DZA65_RS15785	0.60	-0.6
3,429,676	+		DZA65_RS15785	0.60	-0.5
3,429,676	+		DZA65_RS15785	0.60	-0.6
3,429,676	+		DZA65_RS15785	0.60	-1.1
3,429,677	-		DZA65_RS15785	0.60	-2.2
3,429,677	-		DZA65_RS15785	0.60	+0.4
3,429,677	-		DZA65_RS15785	0.60	-0.3
3,429,677	-		DZA65_RS15785	0.60	-0.3
3,429,677	-				-0.0
3,429,677	-		DZA65_RS15785	0.60	-2.5
3,429,946	+		DZA65_RS15785	0.84	+0.3
3,429,946	+		DZA65_RS15785	0.84	-0.1
3,429,946	+		DZA65_RS15785	0.84	-1.3
3,429,946	+		DZA65_RS15785	0.84	-0.0
3,429,947	-		DZA65_RS15785	0.84	-0.0
3,429,947	-		DZA65_RS15785	0.84	-0.2
3,429,947	-		DZA65_RS15785	0.84	+0.8
3,429,965	-		DZA65_RS15785	0.86	-0.5
3,430,149	-				-0.4
3,430,188	+				-0.6
3,430,188	+				-1.0
3,430,189	-				+1.2
3,430,189	-				-0.5
3,430,327	+				-0.7
3,430,335	-				-0.0
3,430,337	+				+1.3
3,430,338	-				-0.8
3,430,338	-				-1.0
3,430,354	-				-0.0
3,430,360	+				+1.1
3,430,361	-				-0.0
3,430,361	-				-0.3
3,430,392	+				-1.3
3,430,446	+				-1.5
3,430,447	-				-2.3
3,430,450	+				-0.2
3,430,450	+				-0.8
3,430,554	+		DZA65_RS15795	0.37	+0.5
3,430,625	-		DZA65_RS15795	0.61	+0.5
3,430,768	+				+0.8
3,430,768	+				-0.3
3,430,769	-				-0.5
3,430,769	-				+0.5
3,430,772	+				-0.4
3,430,772	+				-1.8
3,430,773	-				+0.3
3,430,796	+				-0.4
3,430,807	+				-0.5
3,430,816	-				-0.0
3,430,817	+				+0.1
3,430,817	+				-0.3
3,430,817	+				+0.1
3,430,817	+				-0.6
3,430,818	-				-1.0
3,430,818	-				+0.8
3,430,818	-				-0.5
3,430,818	-				-0.8
3,430,821	+				+0.1
3,430,822	-				-0.8
3,430,825	+				-1.3
3,430,826	-				-1.0
3,430,826	-				+1.2
3,430,845	+				-1.5
3,430,845	+				-1.0
3,430,846	-				-0.7
3,430,846	-				-0.7
3,430,853	+				-0.8
3,430,854	-				-0.6
3,430,854	-				-0.8
3,430,856	-				-2.1
3,430,864	+				-3.0
3,430,865	-				-0.2
3,430,895	-				+0.2
3,430,987	+				-0.3
3,430,987	+				-0.3
3,430,987	+				-2.4
3,430,987	+				+0.5
3,430,987	+				-1.1
3,430,987	+				+0.8
3,430,988	-				+0.9
3,431,095	+				-0.0
3,431,124	+				-1.0
3,431,124	+				+0.7
3,431,124	+				+1.1
3,431,125	-				-0.0
3,431,125	-				-0.0
3,431,153	+				-0.9
3,431,153	+				-0.5
3,431,154	-				-0.3
3,431,154	-				+0.2
3,431,154	-				-0.8
3,431,156	+				-0.5
3,431,156	+				+1.1
3,431,214	+				+1.0
3,431,215	-				-0.7
3,431,242	+				-0.9
3,431,248	-				+0.2
3,431,265	+				+1.1
3,431,265	+				-0.6
3,431,266	-				+1.2
3,431,266	-				-0.6
3,431,266	-				+0.9
3,431,270	-				+0.2
3,431,270	-				-0.1
3,431,488	+				-1.3
3,431,527	-				-1.9
3,431,566	+				-0.5
3,431,567	-				-0.8
3,431,579	+				-0.0
3,431,579	+				-1.0
3,431,579	+				+0.2
3,431,585	+				-1.2
3,431,585	+				-1.3
3,431,586	-				-0.8
3,431,593	+				+1.7
3,431,597	-				-0.1
3,431,608	+				-2.2
3,431,608	+				-0.3
3,431,609	-				+0.9
3,431,609	-				+1.1
3,431,612	+				-0.5
3,431,612	+				+1.6
3,431,612	+				-1.3
3,431,613	-				+1.3
3,431,613	-				+1.8
3,431,613	-				-0.5
3,431,650	+				-1.0
3,431,650	+				+1.5
3,431,651	-				+0.8
3,431,651	-				+1.0
3,431,651	-				+0.5
3,431,675	+				+1.0
3,431,675	+				-0.0
3,431,676	-				-1.3
3,431,676	-				+0.2
3,431,676	-				+1.0
3,431,679	+				-0.0
3,431,679	+				-0.3
3,431,680	-				-0.1
3,431,680	-				-1.5
3,431,705	+		DZA65_RS15805	0.12	+1.8
3,431,706	-		DZA65_RS15805	0.12	-2.2
3,431,706	-		DZA65_RS15805	0.12	-1.0