Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15745

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,417,523	+		DZA65_RS15735	0.65	-0.6
3,417,524	-		DZA65_RS15735	0.65	+1.1
3,417,524	-		DZA65_RS15735	0.65	-0.6
3,417,582	+		DZA65_RS15735	0.70	-0.5
3,417,583	-		DZA65_RS15735	0.71	+0.8
3,417,583	-		DZA65_RS15735	0.71	-0.9
3,417,583	-		DZA65_RS15735	0.71	-1.2
3,417,605	+		DZA65_RS15735	0.73	-0.5
3,417,652	+		DZA65_RS15735	0.77	-1.5
3,417,806	-				-1.9
3,417,883	-				+0.2
3,417,910	+				-1.1
3,417,910	+				-1.0
3,417,911	-				-0.0
3,417,921	+				-2.0
3,417,930	+				-1.3
3,418,074	+				-1.6
3,418,074	+				-1.2
3,418,074	+				-1.2
3,418,074	+				-0.6
3,418,074	+				-1.0
3,418,074	+				+1.1
3,418,075	-				+1.3
3,418,075	-				-1.0
3,418,075	-				-1.4
3,418,075	-				-2.5
3,418,075	-				-2.5
3,418,075	-				-0.6
3,418,075	-				-0.2
3,418,080	+				-0.2
3,418,081	-				-0.6
3,418,081	-				-0.6
3,418,144	+				+0.5
3,418,144	+				-0.0
3,418,144	+				-0.6
3,418,144	+				-1.5
3,418,195	+		DZA65_RS15740	0.20	-0.6
3,418,195	+		DZA65_RS15740	0.20	-0.5
3,418,196	-		DZA65_RS15740	0.21	-0.8
3,418,196	-		DZA65_RS15740	0.21	+1.2
3,418,226	-		DZA65_RS15740	0.37	-1.2
3,418,269	+		DZA65_RS15740	0.59	-1.0
3,418,273	+		DZA65_RS15740	0.61	-1.3
3,418,273	+		DZA65_RS15740	0.61	+1.0
3,418,273	+		DZA65_RS15740	0.61	-0.9
3,418,274	-		DZA65_RS15740	0.62	-1.8
3,418,327	+				-1.3
3,418,327	+				+0.5
3,418,343	+				-1.3
3,418,343	+				-0.6
3,418,344	-				+0.5
3,418,375	+				-0.8
3,418,375	+				+0.5
3,418,376	-				-0.6
3,418,376	-				+1.0
3,418,376	-				-0.8
3,418,376	-				-2.2
3,418,394	-				+0.7
3,418,456	-				-1.3
3,418,456	-				-0.8
3,418,753	+		DZA65_RS15745	0.22	-0.2
3,418,753	+		DZA65_RS15745	0.22	-1.3
3,418,754	-		DZA65_RS15745	0.22	-0.0
3,418,754	-		DZA65_RS15745	0.22	-0.3
3,418,754	-		DZA65_RS15745	0.22	-0.9
3,418,824	+		DZA65_RS15745	0.29	-1.6
3,418,824	+		DZA65_RS15745	0.29	-0.5
3,418,825	-		DZA65_RS15745	0.29	-1.5
3,418,995	+		DZA65_RS15745	0.45	-1.1
3,418,995	+		DZA65_RS15745	0.45	-0.6
3,419,059	+		DZA65_RS15745	0.51	-1.2
3,419,059	+		DZA65_RS15745	0.51	+0.3
3,419,060	-		DZA65_RS15745	0.51	-0.1
3,419,060	-		DZA65_RS15745	0.51	+1.0
3,419,060	-		DZA65_RS15745	0.51	-0.5
3,419,065	+		DZA65_RS15745	0.51	-0.0
3,419,065	+		DZA65_RS15745	0.51	-2.1
3,419,065	+		DZA65_RS15745	0.51	-2.2
3,419,066	-		DZA65_RS15745	0.51	-0.8
3,419,066	-		DZA65_RS15745	0.51	-0.0
3,419,066	-		DZA65_RS15745	0.51	-2.0
3,419,066	-		DZA65_RS15745	0.51	+0.8
3,419,066	-		DZA65_RS15745	0.51	-1.3
3,419,066	-		DZA65_RS15745	0.51	-1.5
3,419,066	-		DZA65_RS15745	0.51	-0.6
3,419,066	-		DZA65_RS15745	0.51	+0.2
3,419,100	-		DZA65_RS15745	0.54	-0.0
3,419,308	+		DZA65_RS15745	0.74	-0.1
3,419,318	+		DZA65_RS15745	0.75	-0.9
3,419,326	+		DZA65_RS15745	0.76	+0.1
3,419,443	+		DZA65_RS15745	0.86	-1.4
3,419,444	-		DZA65_RS15745	0.86	-1.8
3,419,444	-		DZA65_RS15745	0.86	-0.3
3,419,444	-		DZA65_RS15745	0.86	-0.3
3,419,507	+				-0.5
3,419,507	+				-1.0
3,419,534	-				+1.0
3,419,565	+				-1.9
3,419,566	-				-0.3
3,419,757	+				+0.5
3,419,758	-				-1.3
3,419,831	+				-0.8
3,419,882	+				-1.5
3,419,887	+				+0.2
3,419,900	-				-2.5
3,420,055	-		DZA65_RS15750	0.16	-0.9
3,420,055	-		DZA65_RS15750	0.16	-0.5
3,420,085	-		DZA65_RS15750	0.18	-0.9
3,420,109	-		DZA65_RS15750	0.20	+0.0
3,420,264	+		DZA65_RS15750	0.32	-1.3
3,420,264	+		DZA65_RS15750	0.32	-1.0
3,420,267	+		DZA65_RS15750	0.32	-0.1
3,420,267	+				-1.3
3,420,267	+		DZA65_RS15750	0.32	+0.3
3,420,268	-		DZA65_RS15750	0.32	+0.4
3,420,268	-		DZA65_RS15750	0.32	-1.0
3,420,268	-		DZA65_RS15750	0.32	+0.4
3,420,268	-		DZA65_RS15750	0.32	-1.5
3,420,303	+		DZA65_RS15750	0.35	-0.6
3,420,303	+		DZA65_RS15750	0.35	+0.1
3,420,303	+		DZA65_RS15750	0.35	-0.0
3,420,304	-		DZA65_RS15750	0.35	+0.3
3,420,311	+		DZA65_RS15750	0.36	-1.3
3,420,312	-		DZA65_RS15750	0.36	+0.5
3,420,312	-		DZA65_RS15750	0.36	+1.9
3,420,343	-		DZA65_RS15750	0.38	+0.5
3,420,343	-		DZA65_RS15750	0.38	-0.9
3,420,343	-		DZA65_RS15750	0.38	-0.3
3,420,343	-		DZA65_RS15750	0.38	-1.8
3,420,343	-		DZA65_RS15750	0.38	-1.6
3,420,344	+		DZA65_RS15750	0.38	+0.4
3,420,344	+		DZA65_RS15750	0.38	-1.4
3,420,432	-		DZA65_RS15750	0.45	-0.0
3,420,441	+		DZA65_RS15750	0.46	+0.3
3,420,441	+		DZA65_RS15750	0.46	+0.2
3,420,441	+		DZA65_RS15750	0.46	+1.1
3,420,441	+		DZA65_RS15750	0.46	+0.7
3,420,442	-		DZA65_RS15750	0.46	-0.5
3,420,442	-		DZA65_RS15750	0.46	+1.0
3,420,442	-		DZA65_RS15750	0.46	+0.2
3,420,456	+		DZA65_RS15750	0.47	-0.9
3,420,555	+		DZA65_RS15750	0.55	-1.0
3,420,556	-		DZA65_RS15750	0.55	-1.5
3,420,556	-		DZA65_RS15750	0.55	-0.2
3,420,556	-		DZA65_RS15750	0.55	-0.5