Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15740

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,417,175	+		DZA65_RS15735	0.34	+0.5
3,417,175	+		DZA65_RS15735	0.34	-0.6
3,417,175	+		DZA65_RS15735	0.34	-0.8
3,417,176	-		DZA65_RS15735	0.34	-0.6
3,417,176	-		DZA65_RS15735	0.34	-0.5
3,417,187	-		DZA65_RS15735	0.35	-0.9
3,417,326	+		DZA65_RS15735	0.48	-0.2
3,417,326	+		DZA65_RS15735	0.48	-1.5
3,417,326	+		DZA65_RS15735	0.48	-1.8
3,417,326	+		DZA65_RS15735	0.48	-0.5
3,417,326	+		DZA65_RS15735	0.48	+1.5
3,417,327	-				+1.5
3,417,327	-		DZA65_RS15735	0.48	+0.5
3,417,327	-		DZA65_RS15735	0.48	-0.5
3,417,327	-		DZA65_RS15735	0.48	-0.5
3,417,327	-		DZA65_RS15735	0.48	-2.2
3,417,327	-		DZA65_RS15735	0.48	-0.3
3,417,328	+		DZA65_RS15735	0.48	-1.1
3,417,328	+		DZA65_RS15735	0.48	-0.3
3,417,328	+		DZA65_RS15735	0.48	-0.6
3,417,328	+		DZA65_RS15735	0.48	-0.6
3,417,328	+		DZA65_RS15735	0.48	-0.2
3,417,328	+		DZA65_RS15735	0.48	-1.3
3,417,328	+		DZA65_RS15735	0.48	-1.5
3,417,329	-		DZA65_RS15735	0.48	-0.8
3,417,329	-		DZA65_RS15735	0.48	+0.8
3,417,329	-		DZA65_RS15735	0.48	+0.3
3,417,329	-		DZA65_RS15735	0.48	-1.1
3,417,330	+		DZA65_RS15735	0.48	+0.5
3,417,330	+		DZA65_RS15735	0.48	-0.2
3,417,330	+		DZA65_RS15735	0.48	-0.5
3,417,330	+		DZA65_RS15735	0.48	-0.7
3,417,330	+		DZA65_RS15735	0.48	-1.3
3,417,330	+		DZA65_RS15735	0.48	-0.5
3,417,331	-		DZA65_RS15735	0.48	+0.1
3,417,331	-		DZA65_RS15735	0.48	-0.3
3,417,331	-		DZA65_RS15735	0.48	-1.3
3,417,382	+		DZA65_RS15735	0.53	-0.5
3,417,382	+		DZA65_RS15735	0.53	+0.0
3,417,383	-		DZA65_RS15735	0.53	+1.5
3,417,420	-		DZA65_RS15735	0.56	+1.3
3,417,420	-		DZA65_RS15735	0.56	+0.8
3,417,439	+		DZA65_RS15735	0.58	-0.6
3,417,439	+				+0.5
3,417,439	+		DZA65_RS15735	0.58	+0.5
3,417,439	+		DZA65_RS15735	0.58	-0.6
3,417,440	-		DZA65_RS15735	0.58	-1.5
3,417,472	+		DZA65_RS15735	0.61	+0.2
3,417,472	+		DZA65_RS15735	0.61	-0.0
3,417,472	+		DZA65_RS15735	0.61	-1.7
3,417,472	+		DZA65_RS15735	0.61	-0.9
3,417,472	+		DZA65_RS15735	0.61	+0.5
3,417,473	-		DZA65_RS15735	0.61	-1.0
3,417,473	-		DZA65_RS15735	0.61	-0.8
3,417,473	-		DZA65_RS15735	0.61	-1.2
3,417,473	-		DZA65_RS15735	0.61	+0.7
3,417,474	+		DZA65_RS15735	0.61	-1.3
3,417,475	-				-0.5
3,417,475	-		DZA65_RS15735	0.61	-0.0
3,417,475	-		DZA65_RS15735	0.61	-0.6
3,417,489	-		DZA65_RS15735	0.62	+0.2
3,417,489	-		DZA65_RS15735	0.62	-0.8
3,417,489	-		DZA65_RS15735	0.62	-0.2
3,417,523	+		DZA65_RS15735	0.65	-0.6
3,417,524	-		DZA65_RS15735	0.65	+1.1
3,417,524	-		DZA65_RS15735	0.65	-0.6
3,417,582	+		DZA65_RS15735	0.70	-0.5
3,417,583	-		DZA65_RS15735	0.71	+0.8
3,417,583	-		DZA65_RS15735	0.71	-0.9
3,417,583	-		DZA65_RS15735	0.71	-1.2
3,417,605	+		DZA65_RS15735	0.73	-0.5
3,417,652	+		DZA65_RS15735	0.77	-1.5
3,417,806	-				-1.9
3,417,883	-				+0.2
3,417,910	+				-1.1
3,417,910	+				-1.0
3,417,911	-				-0.0
3,417,921	+				-2.0
3,417,930	+				-1.3
3,418,074	+				-1.6
3,418,074	+				-1.2
3,418,074	+				-1.2
3,418,074	+				-0.6
3,418,074	+				-1.0
3,418,074	+				+1.1
3,418,075	-				+1.3
3,418,075	-				-1.0
3,418,075	-				-1.4
3,418,075	-				-2.5
3,418,075	-				-2.5
3,418,075	-				-0.6
3,418,075	-				-0.2
3,418,080	+				-0.2
3,418,081	-				-0.6
3,418,081	-				-0.6
3,418,144	+				+0.5
3,418,144	+				-0.0
3,418,144	+				-0.6
3,418,144	+				-1.5
3,418,195	+		DZA65_RS15740	0.20	-0.6
3,418,195	+		DZA65_RS15740	0.20	-0.5
3,418,196	-		DZA65_RS15740	0.21	-0.8
3,418,196	-		DZA65_RS15740	0.21	+1.2
3,418,226	-		DZA65_RS15740	0.37	-1.2
3,418,269	+		DZA65_RS15740	0.59	-1.0
3,418,273	+		DZA65_RS15740	0.61	-1.3
3,418,273	+		DZA65_RS15740	0.61	+1.0
3,418,273	+		DZA65_RS15740	0.61	-0.9
3,418,274	-		DZA65_RS15740	0.62	-1.8
3,418,327	+				-1.3
3,418,327	+				+0.5
3,418,343	+				-1.3
3,418,343	+				-0.6
3,418,344	-				+0.5
3,418,375	+				-0.8
3,418,375	+				+0.5
3,418,376	-				-0.6
3,418,376	-				+1.0
3,418,376	-				-0.8
3,418,376	-				-2.2
3,418,394	-				+0.7
3,418,456	-				-1.3
3,418,456	-				-0.8
3,418,753	+		DZA65_RS15745	0.22	-0.2
3,418,753	+		DZA65_RS15745	0.22	-1.3
3,418,754	-		DZA65_RS15745	0.22	-0.0
3,418,754	-		DZA65_RS15745	0.22	-0.3
3,418,754	-		DZA65_RS15745	0.22	-0.9
3,418,824	+		DZA65_RS15745	0.29	-1.6
3,418,824	+		DZA65_RS15745	0.29	-0.5
3,418,825	-		DZA65_RS15745	0.29	-1.5
3,418,995	+		DZA65_RS15745	0.45	-1.1
3,418,995	+		DZA65_RS15745	0.45	-0.6
3,419,059	+		DZA65_RS15745	0.51	-1.2
3,419,059	+		DZA65_RS15745	0.51	+0.3
3,419,060	-		DZA65_RS15745	0.51	-0.1
3,419,060	-		DZA65_RS15745	0.51	+1.0
3,419,060	-		DZA65_RS15745	0.51	-0.5
3,419,065	+		DZA65_RS15745	0.51	-0.0
3,419,065	+		DZA65_RS15745	0.51	-2.1
3,419,065	+		DZA65_RS15745	0.51	-2.2
3,419,066	-		DZA65_RS15745	0.51	-0.8
3,419,066	-		DZA65_RS15745	0.51	-0.0
3,419,066	-		DZA65_RS15745	0.51	-2.0
3,419,066	-		DZA65_RS15745	0.51	+0.8
3,419,066	-		DZA65_RS15745	0.51	-1.3
3,419,066	-		DZA65_RS15745	0.51	-1.5
3,419,066	-		DZA65_RS15745	0.51	-0.6
3,419,066	-		DZA65_RS15745	0.51	+0.2
3,419,100	-		DZA65_RS15745	0.54	-0.0
3,419,308	+		DZA65_RS15745	0.74	-0.1
3,419,318	+		DZA65_RS15745	0.75	-0.9
3,419,326	+		DZA65_RS15745	0.76	+0.1