Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15630

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,395,333	+				-0.7
3,395,370	+				-0.5
3,395,370	+				+0.4
3,395,371	-				+0.5
3,395,371	-				+1.1
3,395,371	-				+0.1
3,395,469	+				-1.0
3,395,469	+				+0.5
3,395,470	-				+0.4
3,395,472	+				-1.3
3,395,473	-				+1.3
3,395,473	-				-0.3
3,395,488	+				+0.5
3,395,489	-				+0.1
3,395,502	+				-1.5
3,395,503	-				-1.5
3,395,509	+				-0.2
3,395,509	+				-1.3
3,395,509	+				-0.0
3,395,509	+				+0.5
3,395,509	+				-0.8
3,395,510	-				+1.5
3,395,510	-				+0.4
3,395,530	+				-1.0
3,395,530	+				-0.0
3,395,531	-				-0.3
3,395,531	-				+0.3
3,395,550	-				+0.0
3,395,553	+				-1.3
3,395,553	+				-1.0
3,395,554	-				-1.2
3,395,554	-				+0.2
3,395,569	+				-1.1
3,395,569	+				-0.9
3,395,642	+				+0.1
3,395,643	-				-1.0
3,395,688	-				-1.3
3,395,688	-				+0.2
3,395,785	-				-0.3
3,395,842	-				-0.0
3,395,867	-				-2.0
3,395,867	-				-0.4
3,395,882	+				-0.2
3,395,883	-				+0.1
3,395,883	-				-0.6
3,395,883	-				+0.2
3,395,883	-				+0.3
3,395,883	-				-0.0
3,395,883	-				-0.9
3,395,888	+				-0.5
3,395,888	+				-1.1
3,395,888	+				-0.8
3,395,889	-				-1.3
3,395,903	+				+0.5
3,395,903	+				+0.3
3,395,904	-				-1.6
3,395,920	+				+0.3
3,395,920	+				+1.5
3,395,920	+				+0.3
3,395,920	+				+1.1
3,395,921	-				+0.2
3,395,921	-				-1.0
3,395,921	-				-0.7
3,395,921	-				-0.4
3,395,921	-				-0.5
3,395,921	-				-1.6
3,395,921	-				-1.8
3,395,921	-				-0.5
3,395,921	-				-0.0
3,395,941	+				-1.6
3,395,942	-				+0.1
3,395,942	-				+1.2
3,396,059	+				+0.6
3,396,059	+				+0.8
3,396,060	-				-0.2
3,396,060	-				-0.8
3,396,084	+				+0.2
3,396,084	+				-0.2
3,396,084	+				-0.8
3,396,084	+				+0.0
3,396,084	+				-1.0
3,396,084	+				-0.5
3,396,084	+				-1.3
3,396,084	+				+1.5
3,396,085	-				-1.7
3,396,085	-				-0.3
3,396,085	-				+0.3
3,396,085	-				-1.9
3,396,085	-				-1.5
3,396,124	+		DZA65_RS15625	0.61	+0.3
3,396,124	+		DZA65_RS15625	0.61	-0.2
3,396,124	+		DZA65_RS15625	0.61	-0.8
3,396,125	-		DZA65_RS15625	0.63	-0.6
3,396,128	+		DZA65_RS15625	0.67	-1.4
3,396,128	+		DZA65_RS15625	0.67	-0.5
3,396,128	+		DZA65_RS15625	0.67	-1.4
3,396,129	-		DZA65_RS15625	0.68	+0.0
3,396,162	+				-0.3
3,396,163	-				+0.3
3,396,214	+				-1.2
3,396,420	+		DZA65_RS15630	0.10	-0.0
3,396,421	-		DZA65_RS15630	0.11	-1.1
3,396,421	-		DZA65_RS15630	0.11	+0.5
3,396,427	-		DZA65_RS15630	0.11	-0.8
3,396,535	+		DZA65_RS15630	0.24	-0.3
3,396,593	+		DZA65_RS15630	0.31	-1.8
3,396,661	-		DZA65_RS15630	0.39	-0.8
3,396,673	-		DZA65_RS15630	0.40	-0.3
3,396,673	-		DZA65_RS15630	0.40	-1.3
3,396,692	-		DZA65_RS15630	0.42	-0.0
3,396,995	+		DZA65_RS15630	0.78	-1.4
3,397,105	-				-0.5
3,397,126	+				-0.8
3,397,127	-				+0.5
3,397,147	-				-0.0
3,397,228	+				-1.6
3,397,299	+				-0.2
3,397,364	+				+2.5
3,397,394	-				-0.8
3,397,548	+		DZA65_RS15635	0.38	-0.8
3,397,549	-		DZA65_RS15635	0.38	-0.5
3,397,549	-		DZA65_RS15635	0.38	-0.5
3,397,621	+		DZA65_RS15635	0.53	+0.8
3,397,754	+				-0.0
3,397,754	+		DZA65_RS15635	0.80	-0.6
3,397,754	+		DZA65_RS15635	0.80	-0.8
3,397,754	+		DZA65_RS15635	0.80	+0.2
3,397,754	+		DZA65_RS15635	0.80	+0.2
3,397,754	+		DZA65_RS15635	0.80	-1.3
3,397,754	+		DZA65_RS15635	0.80	+1.0
3,397,754	+		DZA65_RS15635	0.80	+0.3
3,397,755	-		DZA65_RS15635	0.80	-0.5
3,397,755	-		DZA65_RS15635	0.80	-0.5
3,397,755	-		DZA65_RS15635	0.80	-1.3
3,397,757	+		DZA65_RS15635	0.81	+0.1
3,397,757	+		DZA65_RS15635	0.81	-0.0
3,397,757	+		DZA65_RS15635	0.81	-0.9
3,397,757	+		DZA65_RS15635	0.81	+0.3
3,397,757	+		DZA65_RS15635	0.81	-0.5
3,397,757	+		DZA65_RS15635	0.81	+1.1
3,397,757	+		DZA65_RS15635	0.81	-3.2
3,397,757	+		DZA65_RS15635	0.81	+1.1
3,397,757	+		DZA65_RS15635	0.81	+0.4
3,397,757	+		DZA65_RS15635	0.81	+0.5
3,397,757	+		DZA65_RS15635	0.81	-0.6
3,397,757	+		DZA65_RS15635	0.81	-0.5
3,397,758	-		DZA65_RS15635	0.81	+0.7
3,397,758	-		DZA65_RS15635	0.81	+0.4
3,397,758	-		DZA65_RS15635	0.81	+0.3
3,397,758	-		DZA65_RS15635	0.81	+0.5
3,397,758	-		DZA65_RS15635	0.81	-0.0
3,397,758	-		DZA65_RS15635	0.81	+0.5
3,397,758	-		DZA65_RS15635	0.81	-1.0
3,397,758	-		DZA65_RS15635	0.81	-1.0
3,397,758	-		DZA65_RS15635	0.81	+0.1
3,397,758	-		DZA65_RS15635	0.81	-1.6
3,397,758	-		DZA65_RS15635	0.81	-1.2
3,397,758	-		DZA65_RS15635	0.81	-1.3
3,397,758	-		DZA65_RS15635	0.81	-0.7
3,397,870	-				-0.3
3,397,927	+				-0.4
3,397,927	+				-0.5
3,397,927	+				-0.1
3,397,928	-				+1.0
3,397,928	-				+0.4
3,397,928	-				-1.3
3,397,928	-				+0.6
3,397,966	+				+0.2
3,397,966	+				+0.7
3,397,966	+				+0.0
3,397,966	+				+0.1
3,397,967	-				+0.8
3,397,967	-				-0.8
3,397,967	-				-1.8
3,397,967	-				-0.5
3,397,967	-				-0.8