Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15375

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,331,191	+		DZA65_RS15365	0.87	-0.5
3,331,192	-		DZA65_RS15365	0.87	+1.3
3,331,207	-		DZA65_RS15365	0.89	+0.8
3,331,207	-		DZA65_RS15365	0.89	-0.5
3,331,262	-				+1.1
3,331,268	+				-1.1
3,331,282	+				-0.3
3,331,295	-				-1.6
3,331,347	+				-0.4
3,331,348	-				+0.2
3,331,434	-		DZA65_RS15370	0.11	-0.1
3,331,560	+		DZA65_RS15370	0.26	-0.5
3,331,561	+		DZA65_RS15370	0.26	+0.1
3,331,561	+		DZA65_RS15370	0.26	-1.8
3,331,602	+		DZA65_RS15370	0.31	-1.1
3,331,602	+		DZA65_RS15370	0.31	+0.5
3,331,602	+		DZA65_RS15370	0.31	-2.3
3,331,602	+		DZA65_RS15370	0.31	+0.5
3,331,602	+				-0.1
3,331,602	+		DZA65_RS15370	0.31	+0.3
3,331,602	+		DZA65_RS15370	0.31	-1.5
3,331,603	-		DZA65_RS15370	0.31	+0.9
3,331,603	-		DZA65_RS15370	0.31	-1.5
3,331,603	-		DZA65_RS15370	0.31	-0.9
3,331,603	-		DZA65_RS15370	0.31	-1.1
3,331,752	+		DZA65_RS15370	0.49	-1.6
3,331,801	-		DZA65_RS15370	0.55	-1.9
3,332,097	+				+0.1
3,332,116	-				-1.5
3,332,116	-				-0.1
3,332,178	-				-0.5
3,332,245	-				+0.2
3,332,281	+		DZA65_RS15375	0.10	-1.5
3,332,296	-		DZA65_RS15375	0.12	-0.1
3,332,311	-		DZA65_RS15375	0.13	-0.5
3,332,446	+		DZA65_RS15375	0.27	-0.8
3,332,446	+		DZA65_RS15375	0.27	-1.6
3,332,446	+		DZA65_RS15375	0.27	-1.9
3,332,446	+		DZA65_RS15375	0.27	-2.2
3,332,446	+				-1.3
3,332,446	+		DZA65_RS15375	0.27	+0.6
3,332,447	-		DZA65_RS15375	0.27	-1.1
3,332,447	-		DZA65_RS15375	0.27	+0.8
3,332,447	-		DZA65_RS15375	0.27	+0.5
3,332,447	-		DZA65_RS15375	0.27	-0.8
3,332,447	-		DZA65_RS15375	0.27	-0.5
3,332,447	-		DZA65_RS15375	0.27	+0.8
3,332,447	-		DZA65_RS15375	0.27	-0.1
3,332,449	+		DZA65_RS15375	0.27	-2.2
3,332,449	+		DZA65_RS15375	0.27	-1.6
3,332,450	-		DZA65_RS15375	0.27	+0.1
3,332,450	-		DZA65_RS15375	0.27	-0.9
3,332,450	-		DZA65_RS15375	0.27	-0.5
3,332,466	-		DZA65_RS15375	0.29	-0.5
3,332,466	-		DZA65_RS15375	0.29	-0.5
3,332,466	-		DZA65_RS15375	0.29	-0.9
3,332,522	-		DZA65_RS15375	0.34	-0.6
3,332,522	-		DZA65_RS15375	0.34	-0.5
3,332,522	-		DZA65_RS15375	0.34	-1.3
3,332,522	-		DZA65_RS15375	0.34	-0.2
3,332,522	-		DZA65_RS15375	0.34	-0.7
3,332,671	+		DZA65_RS15375	0.49	-1.1
3,332,812	-		DZA65_RS15375	0.63	-0.9
3,332,821	-		DZA65_RS15375	0.64	-0.1
3,332,821	-		DZA65_RS15375	0.64	-1.1
3,333,040	-		DZA65_RS15375	0.85	-1.1
3,333,084	-		DZA65_RS15375	0.90	-1.1
3,333,084	-		DZA65_RS15375	0.90	+0.5
3,333,084	-		DZA65_RS15375	0.90	-0.8
3,333,208	-				+0.5
3,333,208	-				+0.1
3,333,214	+				+0.7
3,333,214	+				-0.4
3,333,214	+				-2.5
3,333,215	-				+0.2
3,333,215	-				-1.3
3,333,215	-				-1.3
3,333,215	-				-0.1
3,333,215	-				-1.2
3,333,250	-				-2.4
3,333,250	-				-0.5
3,333,273	+				-0.2
3,333,379	-				-0.1
3,333,456	+		DZA65_RS15380	0.16	-0.8
3,333,456	+		DZA65_RS15380	0.16	-0.2
3,333,456	+		DZA65_RS15380	0.16	-0.8
3,333,456	+		DZA65_RS15380	0.16	-1.5
3,333,456	+		DZA65_RS15380	0.16	-1.1
3,333,456	+		DZA65_RS15380	0.16	-0.8
3,333,456	+		DZA65_RS15380	0.16	-1.6
3,333,457	-		DZA65_RS15380	0.16	-0.5
3,333,457	-		DZA65_RS15380	0.16	-1.5
3,333,457	-		DZA65_RS15380	0.16	+0.5
3,333,457	-		DZA65_RS15380	0.16	-1.3
3,333,457	-		DZA65_RS15380	0.16	-3.2
3,333,457	-		DZA65_RS15380	0.16	-0.5
3,333,457	-		DZA65_RS15380	0.16	-0.1
3,333,631	+		DZA65_RS15380	0.32	-1.1
3,333,631	+		DZA65_RS15380	0.32	-2.6
3,333,631	+		DZA65_RS15380	0.32	-2.4
3,333,631	+		DZA65_RS15380	0.32	-1.3
3,333,631	+		DZA65_RS15380	0.32	-1.1
3,333,632	-		DZA65_RS15380	0.32	-1.1
3,333,633	+		DZA65_RS15380	0.32	-1.6
3,333,633	+		DZA65_RS15380	0.32	-1.3
3,333,633	+		DZA65_RS15380	0.32	-0.1
3,333,643	+		DZA65_RS15380	0.33	-0.1
3,333,802	+		DZA65_RS15380	0.47	-1.3
3,333,802	+		DZA65_RS15380	0.47	-2.6
3,333,858	+		DZA65_RS15380	0.52	-0.9
3,333,858	+		DZA65_RS15380	0.52	-0.8
3,334,055	-		DZA65_RS15380	0.69	+1.5
3,334,055	-		DZA65_RS15380	0.69	-1.3
3,334,113	+		DZA65_RS15380	0.74	+0.2
3,334,113	+		DZA65_RS15380	0.74	-0.8
3,334,113	+		DZA65_RS15380	0.74	-5.6
3,334,113	+		DZA65_RS15380	0.74	-1.8
3,334,114	-		DZA65_RS15380	0.74	-0.5
3,334,114	-		DZA65_RS15380	0.74	-1.5
3,334,114	-		DZA65_RS15380	0.74	-1.3
3,334,114	-				+0.5
3,334,114	-		DZA65_RS15380	0.74	-2.1
3,334,114	-		DZA65_RS15380	0.74	-0.1