Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15365

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,330,431	-				-0.2
3,330,501	-				-1.9
3,330,551	-				-1.2
3,330,558	-				-1.1
3,330,558	-				-0.6
3,330,558	-				-0.1
3,330,601	+				+0.1
3,330,602	-				+1.3
3,330,602	-				+0.2
3,330,606	+				-0.3
3,330,618	+				-0.6
3,330,619	-				+0.5
3,330,619	-				-0.5
3,330,619	-				+0.8
3,330,625	+				+1.2
3,330,626	-				-0.6
3,330,711	-		DZA65_RS15365	0.14	+0.5
3,330,711	-		DZA65_RS15365	0.14	-0.1
3,330,711	-		DZA65_RS15365	0.14	-0.2
3,330,711	-		DZA65_RS15365	0.14	+0.8
3,330,754	-		DZA65_RS15365	0.21	+0.7
3,330,762	+		DZA65_RS15365	0.22	+0.5
3,330,762	+		DZA65_RS15365	0.22	-0.9
3,330,762	+		DZA65_RS15365	0.22	-0.8
3,330,762	+		DZA65_RS15365	0.22	-0.8
3,330,763	-		DZA65_RS15365	0.22	-0.5
3,330,763	-		DZA65_RS15365	0.22	-0.1
3,330,763	-		DZA65_RS15365	0.22	+0.5
3,330,763	-		DZA65_RS15365	0.22	-1.3
3,330,799	+		DZA65_RS15365	0.27	-0.2
3,330,799	+		DZA65_RS15365	0.27	-0.1
3,330,799	+		DZA65_RS15365	0.27	-0.5
3,330,799	+		DZA65_RS15365	0.27	-1.4
3,330,799	+		DZA65_RS15365	0.27	+0.7
3,330,799	+		DZA65_RS15365	0.27	+0.4
3,330,800	-		DZA65_RS15365	0.28	+0.6
3,330,800	-		DZA65_RS15365	0.28	-0.5
3,330,800	-		DZA65_RS15365	0.28	-1.5
3,330,800	-		DZA65_RS15365	0.28	-0.2
3,330,800	-		DZA65_RS15365	0.28	-0.8
3,330,800	-		DZA65_RS15365	0.28	-0.4
3,330,800	-		DZA65_RS15365	0.28	+0.3
3,330,804	+		DZA65_RS15365	0.28	-0.3
3,330,805	-		DZA65_RS15365	0.28	-0.9
3,330,805	-		DZA65_RS15365	0.28	-0.7
3,330,805	-		DZA65_RS15365	0.28	+0.8
3,330,805	-		DZA65_RS15365	0.28	+0.3
3,330,805	-		DZA65_RS15365	0.28	+2.3
3,330,893	+		DZA65_RS15365	0.42	+0.3
3,330,894	-		DZA65_RS15365	0.42	-1.6
3,330,894	-		DZA65_RS15365	0.42	-0.5
3,330,894	-		DZA65_RS15365	0.42	+1.5
3,330,918	+		DZA65_RS15365	0.45	+0.9
3,330,942	+		DZA65_RS15365	0.49	+0.1
3,330,942	+		DZA65_RS15365	0.49	-1.3
3,330,942	+		DZA65_RS15365	0.49	-0.6
3,330,942	+		DZA65_RS15365	0.49	+0.8
3,330,943	-		DZA65_RS15365	0.49	+0.5
3,330,943	-				+1.5
3,331,006	+		DZA65_RS15365	0.59	-1.3
3,331,011	+		DZA65_RS15365	0.59	-1.8
3,331,011	+		DZA65_RS15365	0.59	-0.4
3,331,011	+		DZA65_RS15365	0.59	+1.5
3,331,011	+		DZA65_RS15365	0.59	+0.8
3,331,011	+		DZA65_RS15365	0.59	-0.6
3,331,011	+		DZA65_RS15365	0.59	-0.6
3,331,012	-		DZA65_RS15365	0.60	+0.2
3,331,012	-		DZA65_RS15365	0.60	-0.6
3,331,012	-		DZA65_RS15365	0.60	+0.1
3,331,012	-		DZA65_RS15365	0.60	+0.4
3,331,012	-		DZA65_RS15365	0.60	-2.8
3,331,012	-		DZA65_RS15365	0.60	+0.7
3,331,191	+		DZA65_RS15365	0.87	-0.5
3,331,192	-		DZA65_RS15365	0.87	+1.3
3,331,207	-		DZA65_RS15365	0.89	+0.8
3,331,207	-		DZA65_RS15365	0.89	-0.5
3,331,262	-				+1.1
3,331,268	+				-1.1
3,331,282	+				-0.3
3,331,295	-				-1.6
3,331,347	+				-0.4
3,331,348	-				+0.2
3,331,434	-		DZA65_RS15370	0.11	-0.1
3,331,560	+		DZA65_RS15370	0.26	-0.5
3,331,561	+		DZA65_RS15370	0.26	+0.1
3,331,561	+		DZA65_RS15370	0.26	-1.8
3,331,602	+		DZA65_RS15370	0.31	-1.1
3,331,602	+		DZA65_RS15370	0.31	+0.5
3,331,602	+		DZA65_RS15370	0.31	-2.3
3,331,602	+		DZA65_RS15370	0.31	+0.5
3,331,602	+				-0.1
3,331,602	+		DZA65_RS15370	0.31	+0.3
3,331,602	+		DZA65_RS15370	0.31	-1.5
3,331,603	-		DZA65_RS15370	0.31	+0.9
3,331,603	-		DZA65_RS15370	0.31	-1.5
3,331,603	-		DZA65_RS15370	0.31	-0.9
3,331,603	-		DZA65_RS15370	0.31	-1.1
3,331,752	+		DZA65_RS15370	0.49	-1.6
3,331,801	-		DZA65_RS15370	0.55	-1.9
3,332,097	+				+0.1
3,332,116	-				-1.5
3,332,116	-				-0.1
3,332,178	-				-0.5
3,332,245	-				+0.2