Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15020

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,277,470	+		DZA65_RS15010	0.46	-0.1
3,277,475	+		DZA65_RS15010	0.47	-1.3
3,277,475	+		DZA65_RS15010	0.47	+0.5
3,277,501	+		DZA65_RS15010	0.50	+2.5
3,277,501	+		DZA65_RS15010	0.50	-0.8
3,277,501	+		DZA65_RS15010	0.50	-1.0
3,277,531	+		DZA65_RS15010	0.55	+0.2
3,277,531	+		DZA65_RS15010	0.55	-0.8
3,277,531	+		DZA65_RS15010	0.55	-0.6
3,277,531	+		DZA65_RS15010	0.55	-1.4
3,277,531	+		DZA65_RS15010	0.55	-0.5
3,277,552	+		DZA65_RS15010	0.58	+1.9
3,277,552	+		DZA65_RS15010	0.58	-2.4
3,277,552	+		DZA65_RS15010	0.58	+1.0
3,277,552	+		DZA65_RS15010	0.58	+0.1
3,277,553	-		DZA65_RS15010	0.58	+0.0
3,277,566	+		DZA65_RS15010	0.60	-1.0
3,277,566	+		DZA65_RS15010	0.60	+1.9
3,277,566	+		DZA65_RS15010	0.60	-1.5
3,277,566	+		DZA65_RS15010	0.60	-1.3
3,277,567	-		DZA65_RS15010	0.60	-0.3
3,277,567	-		DZA65_RS15010	0.60	-1.5
3,277,567	-		DZA65_RS15010	0.60	-0.8
3,277,567	-		DZA65_RS15010	0.60	+1.1
3,277,567	-				-0.1
3,277,567	-		DZA65_RS15010	0.60	-0.5
3,277,567	-		DZA65_RS15010	0.60	+0.2
3,277,567	-		DZA65_RS15010	0.60	+0.5
3,277,589	+		DZA65_RS15010	0.63	-1.1
3,277,590	-		DZA65_RS15010	0.63	-1.1
3,277,590	-		DZA65_RS15010	0.63	-1.9
3,277,590	-		DZA65_RS15010	0.63	+1.1
3,277,590	-		DZA65_RS15010	0.63	-0.1
3,277,638	-		DZA65_RS15010	0.70	-0.1
3,277,681	-		DZA65_RS15010	0.76	-0.1
3,277,681	-		DZA65_RS15010	0.76	+0.3
3,277,681	-		DZA65_RS15010	0.76	-1.6
3,277,688	-		DZA65_RS15010	0.77	+0.2
3,277,707	+		DZA65_RS15010	0.80	-2.0
3,277,708	-		DZA65_RS15010	0.80	+0.3
3,277,708	-		DZA65_RS15010	0.80	-0.7
3,277,714	+		DZA65_RS15010	0.81	-0.5
3,277,715	-		DZA65_RS15010	0.81	-2.6
3,277,726	+		DZA65_RS15010	0.82	-0.2
3,277,727	-		DZA65_RS15010	0.82	-0.3
3,277,727	-		DZA65_RS15010	0.82	+0.6
3,277,736	+		DZA65_RS15010	0.84	-0.5
3,277,780	-				-1.3
3,277,801	-				+1.5
3,277,805	+				+0.8
3,277,827	-				+0.5
3,277,856	+				-1.1
3,277,856	+				-1.1
3,277,877	+				-0.8
3,277,878	-				+0.2
3,277,888	+				+0.5
3,277,888	+				-0.8
3,277,888	+				-1.3
3,277,910	+				+1.5
3,277,918	+				+0.7
3,277,918	+				-1.6
3,277,918	+				+0.6
3,277,918	+				-2.0
3,277,918	+				+0.7
3,277,919	-				+0.5
3,277,934	-				-2.3
3,277,934	-				+0.1
3,277,943	+				-0.1
3,277,944	-				-1.1
3,277,944	-				-1.0
3,277,944	-				-0.4
3,277,944	-				-0.1
3,277,961	+				-1.9
3,277,966	+				-0.8
3,278,003	+				-0.4
3,278,003	+				-1.5
3,278,003	+				-1.8
3,278,003	+				+0.3
3,278,003	+				-1.6
3,278,004	-				-0.5
3,278,004	-				-1.8
3,278,004	-				+0.6
3,278,004	-				+0.6
3,278,005	+				+0.1
3,278,006	-				-0.1
3,278,017	+				+0.5
3,278,018	-				-0.7
3,278,020	+				+0.4
3,278,020	+				-0.7
3,278,020	+				-1.8
3,278,020	+				-3.0
3,278,020	+				-1.1
3,278,020	+				-0.3
3,278,020	+				-0.3
3,278,020	+				-0.3
3,278,021	-				+0.6
3,278,021	-				-0.7
3,278,021	-				-0.1
3,278,021	-				-2.8
3,278,021	-				-0.8
3,278,021	-				+0.3
3,278,026	+				-0.1
3,278,027	-				-1.2
3,278,027	-				-0.8
3,278,042	+		DZA65_RS15015	0.13	-1.3
3,278,043	-		DZA65_RS15015	0.13	-0.2
3,278,141	+		DZA65_RS15015	0.33	-0.1
3,278,141	+		DZA65_RS15015	0.33	+0.2
3,278,141	+		DZA65_RS15015	0.33	+0.3
3,278,142	-				+0.5
3,278,142	-		DZA65_RS15015	0.34	+0.5
3,278,142	-		DZA65_RS15015	0.34	-0.7
3,278,259	+		DZA65_RS15015	0.58	-2.0
3,278,259	+		DZA65_RS15015	0.58	+1.7
3,278,259	+		DZA65_RS15015	0.58	+0.9
3,278,260	-		DZA65_RS15015	0.58	-1.2
3,278,260	-		DZA65_RS15015	0.58	-0.3
3,278,260	-		DZA65_RS15015	0.58	+1.0
3,278,282	+		DZA65_RS15015	0.63	-0.7
3,278,282	+		DZA65_RS15015	0.63	+1.2
3,278,282	+		DZA65_RS15015	0.63	-1.3
3,278,283	-		DZA65_RS15015	0.63	-0.8
3,278,339	+		DZA65_RS15015	0.75	-1.1
3,278,340	-		DZA65_RS15015	0.75	-0.7
3,278,340	-		DZA65_RS15015	0.75	-0.8
3,278,340	-		DZA65_RS15015	0.75	-0.5
3,278,340	-		DZA65_RS15015	0.75	-0.8
3,278,361	+		DZA65_RS15015	0.79	-0.8
3,278,361	+		DZA65_RS15015	0.79	+0.5
3,278,361	+		DZA65_RS15015	0.79	+0.2
3,278,362	-		DZA65_RS15015	0.80	+1.5
3,278,362	-		DZA65_RS15015	0.80	-0.7
3,278,362	-		DZA65_RS15015	0.80	-1.3
3,278,362	-		DZA65_RS15015	0.80	-2.1
3,278,362	-		DZA65_RS15015	0.80	-0.6
3,278,371	+		DZA65_RS15015	0.82	-0.1
3,278,371	+		DZA65_RS15015	0.82	-0.6
3,278,372	-		DZA65_RS15015	0.82	-0.7
3,278,372	-		DZA65_RS15015	0.82	-1.6
3,278,372	-		DZA65_RS15015	0.82	+0.2
3,278,372	-		DZA65_RS15015	0.82	-0.1
3,278,374	+		DZA65_RS15015	0.82	-1.8
3,278,375	-		DZA65_RS15015	0.82	-1.6
3,278,375	-		DZA65_RS15015	0.82	-0.2
3,278,375	-		DZA65_RS15015	0.82	-0.6
3,278,375	-		DZA65_RS15015	0.82	+0.1
3,278,375	-		DZA65_RS15015	0.82	-0.1
3,278,377	+		DZA65_RS15015	0.83	-1.3
3,278,377	+		DZA65_RS15015	0.83	+0.5
3,278,377	+		DZA65_RS15015	0.83	-0.1
3,278,377	+		DZA65_RS15015	0.83	+1.0
3,278,378	-		DZA65_RS15015	0.83	-1.3
3,278,378	-		DZA65_RS15015	0.83	+0.5
3,278,410	-		DZA65_RS15015	0.90	+0.1
3,278,410	-		DZA65_RS15015	0.90	-1.6
3,278,458	+				+0.1
3,278,458	+				-2.0
3,278,521	+				-1.0
3,278,521	+				-0.9
3,278,521	+				+1.0
3,278,521	+				-0.5
3,278,521	+				+1.2
3,278,521	+				-1.5
3,278,521	+				-0.1
3,278,521	+				-0.5
3,278,521	+				-0.3
3,278,521	+				-1.0
3,278,521	+				-0.3
3,278,521	+				-0.8
3,278,521	+				+0.7
3,278,521	+				+1.7
3,278,522	-				-0.2
3,278,522	-				-0.8
3,278,522	-				-1.0
3,278,522	-				+0.2
3,278,522	-				-1.0
3,278,522	-				-0.9
3,278,522	-				-0.4
3,278,522	-				-0.4
3,278,522	-				+0.2
3,278,522	-				-0.7
3,278,522	-				-1.1
3,278,522	-				-0.1
3,278,522	-				-0.5
3,278,522	-				-1.3
3,278,526	-				-0.1
3,278,561	+				-0.4
3,278,562	-				-2.6
3,278,563	+				-0.4
3,278,564	-				-0.3
3,278,569	+				-1.5
3,278,570	-				-0.6
3,278,570	-				-0.1
3,278,570	-				-2.1
3,278,570	-				-0.2
3,278,571	+				-0.6
3,278,591	+		DZA65_RS15020	0.11	+0.5
3,278,592	-		DZA65_RS15020	0.11	-1.3
3,278,612	+		DZA65_RS15020	0.13	+0.2
3,278,613	-		DZA65_RS15020	0.13	-1.0
3,278,613	-		DZA65_RS15020	0.13	+0.5
3,278,712	+		DZA65_RS15020	0.22	-1.3
3,278,712	+		DZA65_RS15020	0.22	-0.1
3,278,712	+		DZA65_RS15020	0.22	+0.5
3,278,712	+		DZA65_RS15020	0.22	+0.5
3,278,712	+		DZA65_RS15020	0.22	-1.1
3,278,712	+		DZA65_RS15020	0.22	+0.5
3,278,712	+		DZA65_RS15020	0.22	-1.5
3,278,712	+		DZA65_RS15020	0.22	-0.5
3,278,713	-		DZA65_RS15020	0.22	-0.1
3,278,713	-		DZA65_RS15020	0.22	-0.5
3,278,713	-		DZA65_RS15020	0.22	+0.7
3,278,714	+		DZA65_RS15020	0.22	-0.2
3,278,714	+		DZA65_RS15020	0.22	-0.7
3,278,714	+		DZA65_RS15020	0.22	-0.6
3,278,714	+		DZA65_RS15020	0.22	-0.2
3,278,714	+		DZA65_RS15020	0.22	-0.6
3,278,714	+		DZA65_RS15020	0.22	-1.2
3,278,714	+		DZA65_RS15020	0.22	+0.3
3,278,715	-		DZA65_RS15020	0.22	-1.1
3,278,715	-		DZA65_RS15020	0.22	+0.7
3,278,715	-		DZA65_RS15020	0.22	-1.6
3,278,715	-		DZA65_RS15020	0.22	-1.0
3,278,715	-		DZA65_RS15020	0.22	+0.2
3,278,715	-		DZA65_RS15020	0.22	-0.5
3,278,716	+		DZA65_RS15020	0.22	-1.3
3,278,717	-		DZA65_RS15020	0.23	-0.7
3,278,717	-		DZA65_RS15020	0.23	+2.1
3,278,752	-		DZA65_RS15020	0.26	-0.2
3,278,753	+		DZA65_RS15020	0.26	+0.5
3,278,753	+		DZA65_RS15020	0.26	+0.0
3,278,753	+		DZA65_RS15020	0.26	-1.8
3,278,753	+		DZA65_RS15020	0.26	+0.7
3,278,753	+		DZA65_RS15020	0.26	+0.5
3,278,753	+		DZA65_RS15020	0.26	+0.7
3,278,753	+		DZA65_RS15020	0.26	-1.1
3,278,753	+		DZA65_RS15020	0.26	-1.1
3,278,754	-		DZA65_RS15020	0.26	+0.5
3,278,754	-		DZA65_RS15020	0.26	-1.2
3,278,754	-		DZA65_RS15020	0.26	-0.0
3,278,754	-		DZA65_RS15020	0.26	+1.2
3,278,757	+		DZA65_RS15020	0.26	-0.6
3,278,757	+		DZA65_RS15020	0.26	-0.2
3,278,757	+		DZA65_RS15020	0.26	+0.2
3,278,758	-		DZA65_RS15020	0.26	-1.1
3,278,758	-		DZA65_RS15020	0.26	+0.9
3,278,758	-		DZA65_RS15020	0.26	-0.0
3,278,758	-		DZA65_RS15020	0.26	+0.3
3,278,758	-		DZA65_RS15020	0.26	-0.1
3,278,758	-		DZA65_RS15020	0.26	-0.3
3,278,758	-		DZA65_RS15020	0.26	-0.5
3,278,802	+		DZA65_RS15020	0.30	-0.7
3,278,831	+		DZA65_RS15020	0.33	+0.5
3,278,832	-		DZA65_RS15020	0.33	-0.5
3,278,908	+		DZA65_RS15020	0.40	-1.1
3,278,908	+		DZA65_RS15020	0.40	+0.1
3,278,908	+		DZA65_RS15020	0.40	-0.1
3,278,908	+		DZA65_RS15020	0.40	-2.0
3,278,908	+		DZA65_RS15020	0.40	-1.3
3,278,908	+		DZA65_RS15020	0.40	-2.0
3,278,908	+		DZA65_RS15020	0.40	+0.2
3,278,909	-		DZA65_RS15020	0.40	-1.3
3,278,909	-		DZA65_RS15020	0.40	+0.5
3,278,909	-		DZA65_RS15020	0.40	-0.6
3,278,909	-		DZA65_RS15020	0.40	-0.5
3,278,909	-		DZA65_RS15020	0.40	-1.8
3,279,028	+		DZA65_RS15020	0.51	+0.2
3,279,028	+		DZA65_RS15020	0.51	-1.3
3,279,028	+		DZA65_RS15020	0.51	-0.8
3,279,028	+		DZA65_RS15020	0.51	-0.6
3,279,028	+		DZA65_RS15020	0.51	-0.7
3,279,028	+		DZA65_RS15020	0.51	-2.2
3,279,028	+		DZA65_RS15020	0.51	-0.3
3,279,028	+		DZA65_RS15020	0.51	+0.5
3,279,028	+		DZA65_RS15020	0.51	+0.6
3,279,028	+		DZA65_RS15020	0.51	+0.3
3,279,028	+		DZA65_RS15020	0.51	+0.5
3,279,029	-		DZA65_RS15020	0.51	+0.9
3,279,029	-		DZA65_RS15020	0.51	-0.9
3,279,029	-		DZA65_RS15020	0.51	-0.8
3,279,029	-		DZA65_RS15020	0.51	+0.9
3,279,029	-		DZA65_RS15020	0.51	-0.5
3,279,029	-		DZA65_RS15020	0.51	-0.1
3,279,030	+		DZA65_RS15020	0.51	+0.3
3,279,030	+		DZA65_RS15020	0.51	-0.1
3,279,030	+		DZA65_RS15020	0.51	-0.6
3,279,030	+		DZA65_RS15020	0.51	-0.8
3,279,031	-		DZA65_RS15020	0.51	+0.2
3,279,031	-		DZA65_RS15020	0.51	+0.1
3,279,031	-		DZA65_RS15020	0.51	-0.1
3,279,031	-		DZA65_RS15020	0.51	-3.0
3,279,031	-		DZA65_RS15020	0.51	-0.6
3,279,031	-		DZA65_RS15020	0.51	-0.5
3,279,031	-		DZA65_RS15020	0.51	-0.1
3,279,032	+		DZA65_RS15020	0.51	+0.5
3,279,032	+		DZA65_RS15020	0.51	+0.3
3,279,032	+		DZA65_RS15020	0.51	+0.2
3,279,032	+		DZA65_RS15020	0.51	+0.7
3,279,032	+		DZA65_RS15020	0.51	-0.3
3,279,032	+		DZA65_RS15020	0.51	-0.7
3,279,033	-		DZA65_RS15020	0.51	-2.3
3,279,033	-		DZA65_RS15020	0.51	-0.8
3,279,033	-				+1.5
3,279,033	-		DZA65_RS15020	0.51	-1.3
3,279,033	-		DZA65_RS15020	0.51	+0.2
3,279,033	-		DZA65_RS15020	0.51	-1.3
3,279,033	-		DZA65_RS15020	0.51	-0.9
3,279,033	-		DZA65_RS15020	0.51	+0.4
3,279,033	-		DZA65_RS15020	0.51	-0.4
3,279,033	-		DZA65_RS15020	0.51	-0.5
3,279,054	+		DZA65_RS15020	0.53	-0.3
3,279,076	+		DZA65_RS15020	0.55	-0.5
3,279,076	+		DZA65_RS15020	0.55	-1.2
3,279,076	+		DZA65_RS15020	0.55	-0.3
3,279,076	+		DZA65_RS15020	0.55	+0.3
3,279,077	-		DZA65_RS15020	0.55	+0.3
3,279,077	-		DZA65_RS15020	0.55	-0.1
3,279,080	+		DZA65_RS15020	0.55	-0.0
3,279,080	+		DZA65_RS15020	0.55	-2.1
3,279,080	+				-0.1
3,279,081	-		DZA65_RS15020	0.56	-0.3
3,279,081	-		DZA65_RS15020	0.56	-1.3
3,279,081	-		DZA65_RS15020	0.56	-0.1
3,279,113	+				+0.5
3,279,113	+		DZA65_RS15020	0.58	-0.1
3,279,113	+		DZA65_RS15020	0.58	-1.5
3,279,113	+		DZA65_RS15020	0.58	-2.1
3,279,114	-		DZA65_RS15020	0.59	+0.2
3,279,134	+		DZA65_RS15020	0.60	-0.5
3,279,134	+		DZA65_RS15020	0.60	-0.4
3,279,158	+		DZA65_RS15020	0.63	+0.1
3,279,158	+		DZA65_RS15020	0.63	+0.5
3,279,159	-		DZA65_RS15020	0.63	-0.4
3,279,159	-		DZA65_RS15020	0.63	-0.2
3,279,159	-		DZA65_RS15020	0.63	+0.6
3,279,159	-		DZA65_RS15020	0.63	-1.7
3,279,160	+		DZA65_RS15020	0.63	-0.5
3,279,160	+		DZA65_RS15020	0.63	-0.8
3,279,160	+		DZA65_RS15020	0.63	+0.2
3,279,160	+		DZA65_RS15020	0.63	+0.8
3,279,160	+		DZA65_RS15020	0.63	+0.6
3,279,160	+		DZA65_RS15020	0.63	+0.8
3,279,160	+		DZA65_RS15020	0.63	+1.1
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3,280,510	-		DZA65_RS15030	0.36	-1.1
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