Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14760

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,213,066	+				+1.5
3,213,066	+				+0.3
3,213,066	+				+0.3
3,213,066	+				+0.0
3,213,067	-				-0.5
3,213,137	+				-0.8
3,213,228	+				-0.1
3,213,323	+		DZA65_RS14755	0.15	+1.5
3,213,323	+		DZA65_RS14755	0.15	-0.5
3,213,324	-		DZA65_RS14755	0.15	+1.5
3,213,324	-		DZA65_RS14755	0.15	-0.9
3,213,383	+		DZA65_RS14755	0.23	-0.1
3,213,395	+		DZA65_RS14755	0.24	-0.5
3,213,395	+		DZA65_RS14755	0.24	-0.2
3,213,396	-		DZA65_RS14755	0.24	-1.2
3,213,396	-		DZA65_RS14755	0.24	-0.7
3,213,615	-		DZA65_RS14755	0.52	-0.8
3,213,615	-		DZA65_RS14755	0.52	+0.5
3,213,681	-		DZA65_RS14755	0.60	-1.7
3,213,681	-		DZA65_RS14755	0.60	+0.2
3,213,711	+		DZA65_RS14755	0.64	+0.1
3,213,711	+		DZA65_RS14755	0.64	-0.4
3,213,712	-		DZA65_RS14755	0.64	-1.1
3,213,712	-		DZA65_RS14755	0.64	-1.7
3,213,718	+		DZA65_RS14755	0.65	+0.1
3,213,719	-		DZA65_RS14755	0.65	+1.2
3,213,719	-		DZA65_RS14755	0.65	+0.2
3,213,749	+		DZA65_RS14755	0.68	+0.7
3,213,749	+		DZA65_RS14755	0.68	-1.1
3,213,749	+		DZA65_RS14755	0.68	-0.5
3,213,749	+		DZA65_RS14755	0.68	-0.5
3,213,749	+		DZA65_RS14755	0.68	+0.3
3,213,750	-		DZA65_RS14755	0.69	-0.3
3,213,753	-		DZA65_RS14755	0.69	+0.7
3,213,883	+		DZA65_RS14755	0.85	-0.8
3,213,884	-		DZA65_RS14755	0.85	-0.4
3,214,000	+				+0.1
3,214,001	-				+0.7
3,214,024	+				+1.1
3,214,024	+				+0.2
3,214,025	-				+0.5
3,214,065	+				-0.3
3,214,065	+				-0.8
3,214,066	-				-0.6
3,214,066	-				-0.1
3,214,066	-				-0.2
3,214,315	+		DZA65_RS14760	0.33	-1.5
3,214,315	+		DZA65_RS14760	0.33	+0.7
3,214,353	-		DZA65_RS14760	0.37	+0.7
3,214,379	+		DZA65_RS14760	0.40	+1.2
3,214,380	-		DZA65_RS14760	0.40	+0.9
3,214,380	-		DZA65_RS14760	0.40	-0.8
3,214,385	+		DZA65_RS14760	0.40	+0.6
3,214,385	+		DZA65_RS14760	0.40	+0.5
3,214,386	-		DZA65_RS14760	0.40	+0.3
3,214,499	+		DZA65_RS14760	0.53	-1.7
3,214,499	+		DZA65_RS14760	0.53	-0.3
3,214,630	+		DZA65_RS14760	0.67	-0.3
3,214,630	+		DZA65_RS14760	0.67	-0.1
3,214,631	-		DZA65_RS14760	0.67	-0.6
3,214,631	-		DZA65_RS14760	0.67	+0.3
3,214,631	-		DZA65_RS14760	0.67	-1.3
3,214,731	+		DZA65_RS14760	0.78	-0.5
3,214,952	-				-1.3
3,215,034	+				-1.1
3,215,035	-				+0.7
3,215,098	+		DZA65_RS14765	0.11	-1.3
3,215,098	+		DZA65_RS14765	0.11	-1.1
3,215,099	-		DZA65_RS14765	0.12	+0.5
3,215,099	-		DZA65_RS14765	0.12	-1.1
3,215,099	-		DZA65_RS14765	0.12	-1.8
3,215,102	+		DZA65_RS14765	0.12	-1.2
3,215,138	-		DZA65_RS14765	0.15	+0.5
3,215,138	-		DZA65_RS14765	0.15	-1.3
3,215,192	+		DZA65_RS14765	0.19	-1.8
3,215,192	+		DZA65_RS14765	0.19	+1.2
3,215,192	+		DZA65_RS14765	0.19	+0.1
3,215,193	-		DZA65_RS14765	0.19	-1.3
3,215,193	-		DZA65_RS14765	0.19	-0.1
3,215,193	-		DZA65_RS14765	0.19	-0.3
3,215,206	+		DZA65_RS14765	0.20	-0.1
3,215,206	+		DZA65_RS14765	0.20	+0.5
3,215,233	+		DZA65_RS14765	0.22	-0.5
3,215,234	-		DZA65_RS14765	0.22	+0.2
3,215,234	-		DZA65_RS14765	0.22	-0.1
3,215,285	-		DZA65_RS14765	0.26	+1.2
3,215,285	-		DZA65_RS14765	0.26	-0.6
3,215,285	-		DZA65_RS14765	0.26	+0.2
3,215,285	-		DZA65_RS14765	0.26	-0.3
3,215,332	+		DZA65_RS14765	0.30	-1.0
3,215,332	+		DZA65_RS14765	0.30	-2.5
3,215,332	+		DZA65_RS14765	0.30	-0.5
3,215,332	+		DZA65_RS14765	0.30	-0.3
3,215,333	-		DZA65_RS14765	0.30	-0.3
3,215,333	-		DZA65_RS14765	0.30	-0.3
3,215,333	-		DZA65_RS14765	0.30	-0.8
3,215,333	-		DZA65_RS14765	0.30	+0.6
3,215,388	+		DZA65_RS14765	0.34	-0.7
3,215,389	-		DZA65_RS14765	0.34	-2.3
3,215,501	+		DZA65_RS14765	0.43	-0.8
3,215,502	-		DZA65_RS14765	0.43	-0.6
3,215,502	-		DZA65_RS14765	0.43	-0.3
3,215,680	+		DZA65_RS14765	0.57	+0.0
3,215,681	-		DZA65_RS14765	0.57	+0.7
3,215,683	+		DZA65_RS14765	0.57	-1.3
3,215,683	+		DZA65_RS14765	0.57	+0.9
3,215,683	+		DZA65_RS14765	0.57	+0.7
3,215,683	+		DZA65_RS14765	0.57	+1.0
3,215,683	+		DZA65_RS14765	0.57	+0.3
3,215,684	-		DZA65_RS14765	0.57	-0.8
3,215,684	-		DZA65_RS14765	0.57	+1.5
3,215,684	-		DZA65_RS14765	0.57	-0.4
3,215,684	-		DZA65_RS14765	0.57	-2.4
3,215,731	+		DZA65_RS14765	0.61	+0.3
3,215,731	+		DZA65_RS14765	0.61	-1.1
3,215,731	+		DZA65_RS14765	0.61	+0.5
3,215,731	+		DZA65_RS14765	0.61	-1.0
3,215,731	+		DZA65_RS14765	0.61	-0.1
3,215,731	+		DZA65_RS14765	0.61	-0.2
3,215,731	+		DZA65_RS14765	0.61	-1.3
3,215,732	-		DZA65_RS14765	0.61	+0.5
3,215,732	-		DZA65_RS14765	0.61	-0.0
3,215,732	-		DZA65_RS14765	0.61	-1.3
3,215,732	-		DZA65_RS14765	0.61	+0.1
3,215,732	-		DZA65_RS14765	0.61	-0.7
3,215,732	-		DZA65_RS14765	0.61	-0.5
3,215,732	-		DZA65_RS14765	0.61	-1.9
3,215,732	-		DZA65_RS14765	0.61	+0.8
3,215,756	+		DZA65_RS14765	0.62	+0.7
3,215,756	+				+0.9
3,215,896	+		DZA65_RS14765	0.73	+0.9