Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14140

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,033,790	+				-1.8
3,033,808	+				+0.8
3,033,809	-				-0.7
3,033,809	-				+0.9
3,033,809	-				+0.6
3,033,820	+				+0.8
3,033,853	+				+0.7
3,033,867	+				+1.4
3,033,868	-				-0.5
3,033,879	+				+1.0
3,033,879	+				-1.1
3,033,879	+				-0.2
3,033,879	+				+0.6
3,033,880	-				-0.4
3,033,880	-				+0.4
3,033,880	-				-0.9
3,033,880	-				-0.6
3,033,880	-				-0.2
3,033,880	-				-1.0
3,033,882	-				-0.4
3,033,882	-				+0.1
3,033,882	-				-0.9
3,033,882	-				+0.4
3,033,913	-				-1.4
3,033,924	+				-1.2
3,033,925	-				-0.8
3,033,927	+				-1.4
3,033,928	-				-2.2
3,033,976	+				-1.6
3,033,976	+				-0.5
3,033,993	+				-0.8
3,033,993	+				+0.4
3,033,994	-		DZA65_RS14130	0.10	-3.0
3,033,994	-		DZA65_RS14130	0.10	-1.8
3,033,994	-		DZA65_RS14130	0.10	+0.4
3,033,994	-		DZA65_RS14130	0.10	+1.0
3,033,994	-		DZA65_RS14130	0.10	+0.4
3,033,994	-		DZA65_RS14130	0.10	-0.3
3,033,994	-		DZA65_RS14130	0.10	+0.7
3,033,997	+		DZA65_RS14130	0.11	-0.6
3,033,997	+		DZA65_RS14130	0.11	-2.6
3,033,997	+		DZA65_RS14130	0.11	-1.2
3,033,998	-		DZA65_RS14130	0.12	-0.9
3,034,048	+		DZA65_RS14130	0.28	-0.9
3,034,122	+		DZA65_RS14130	0.51	-1.2
3,034,123	-		DZA65_RS14130	0.52	-1.2
3,034,123	-		DZA65_RS14130	0.52	-0.4
3,034,195	+		DZA65_RS14130	0.75	+1.4
3,034,271	+				+0.4
3,034,277	+				-0.0
3,034,277	+				-0.9
3,034,278	-				-0.5
3,034,278	-				-0.3
3,034,278	-				-1.0
3,034,283	+				+0.2
3,034,283	+				-0.3
3,034,283	+				-0.2
3,034,284	-				+0.6
3,034,284	-				-1.6
3,034,344	-		DZA65_RS14135	0.18	-0.8
3,034,354	-		DZA65_RS14135	0.20	-1.5
3,034,515	+		DZA65_RS14135	0.52	+0.6
3,034,515	+		DZA65_RS14135	0.52	+0.4
3,034,516	-		DZA65_RS14135	0.52	-0.1
3,034,516	-		DZA65_RS14135	0.52	+1.0
3,034,567	+		DZA65_RS14135	0.63	-0.3
3,034,722	+				-0.2
3,034,723	-				-1.0
3,034,777	+				-0.8
3,034,777	+				+1.1
3,034,777	-				-0.8
3,034,821	+		DZA65_RS14140	0.17	+0.7
3,034,869	+		DZA65_RS14140	0.27	-0.5
3,035,007	+		DZA65_RS14140	0.59	+1.4
3,035,019	+		DZA65_RS14140	0.61	+1.1
3,035,020	-		DZA65_RS14140	0.62	+0.6
3,035,020	-		DZA65_RS14140	0.62	-0.9
3,035,041	+		DZA65_RS14140	0.66	-0.9
3,035,074	+		DZA65_RS14140	0.74	+0.2
3,035,074	+		DZA65_RS14140	0.74	-0.4
3,035,075	-				+2.4
3,035,075	-		DZA65_RS14140	0.74	+2.7
3,035,121	-		DZA65_RS14140	0.85	-1.1
3,035,245	+				-0.4
3,035,245	+				+0.8
3,035,245	+				+0.4
3,035,245	+				-1.0
3,035,245	+				-0.8
3,035,246	-				+0.8
3,035,246	-				-0.9
3,035,246	-				+0.2
3,035,255	+				+0.4
3,035,256	-				+0.8
3,035,303	-				-0.2
3,035,303	-				-1.2
3,035,346	-				+0.1
3,035,459	+				+0.8
3,035,460	-				+0.9
3,035,460	-				-0.4
3,035,544	+				-0.6
3,035,544	+				-0.4
3,035,544	+				-1.4
3,035,544	+				+0.4
3,035,544	+				-0.4
3,035,544	+				-1.1
3,035,544	+				-0.2
3,035,544	+				-0.2
3,035,544	+				-0.6
3,035,544	+				+0.2
3,035,544	+				+0.8
3,035,544	+				-1.3
3,035,544	+				-0.3
3,035,544	+				-0.2
3,035,544	+				-2.3
3,035,544	+				-0.0
3,035,545	-				+0.7
3,035,545	-				+0.1
3,035,545	-				-1.0
3,035,545	-				-0.6
3,035,545	-				+0.7
3,035,545	-				-0.2
3,035,545	-				+0.2
3,035,545	-				+0.6
3,035,545	-				-0.6
3,035,545	-				+0.4
3,035,545	-				-0.6
3,035,545	-				-0.2
3,035,545	-				-0.3
3,035,545	-				-1.8
3,035,597	+				-0.6
3,035,601	+				-0.6
3,035,601	+				+1.1
3,035,602	-				+0.4
3,035,644	+		DZA65_RS14145	0.22	-1.0
3,035,645	-		DZA65_RS14145	0.23	+0.4
3,035,650	+		DZA65_RS14145	0.25	-1.2
3,035,651	-		DZA65_RS14145	0.26	+2.0
3,035,653	+		DZA65_RS14145	0.27	-1.4
3,035,653	+		DZA65_RS14145	0.27	-1.0
3,035,654	-		DZA65_RS14145	0.27	-0.0
3,035,654	-		DZA65_RS14145	0.27	+0.2
3,035,729	-		DZA65_RS14145	0.65	-1.6
3,035,792	-				+1.9
3,035,792	-				-1.9
3,035,798	-				-0.2
3,035,832	-				-1.1
3,035,866	-				-0.2
3,035,874	-				-1.6
3,035,874	-				-0.9
3,035,923	+				-0.9
3,035,924	-				+0.1
3,035,924	-				+0.6
3,035,924	-				-0.2
3,035,927	+				-1.2
3,035,927	+				-1.1
3,035,927	+				-2.6
3,035,927	+				-0.8
3,035,927	+				-0.3
3,035,927	+				-0.2
3,035,927	+				-0.2
3,035,927	+				-0.8
3,035,927	+				-0.8
3,035,927	+				+0.2
3,035,928	-				-1.3
3,035,928	-				-0.2
3,035,928	-				-1.1
3,035,928	-				-2.0
3,035,928	-				-0.4
3,035,928	-				-0.5
3,035,928	-				-1.1
3,035,928	-				+1.4
3,035,928	-				-0.2
3,035,928	-				-0.6
3,035,928	-				-1.6
3,035,928	-				-0.5
3,035,933	+				-0.8
3,035,933	+				-1.0
3,035,933	+				-0.1
3,035,933	+				+0.6
3,035,933	+				-0.3
3,035,933	+				-1.6
3,035,933	+				-0.4
3,035,934	-				-0.4
3,035,934	-				-0.6
3,035,934	-				-0.6
3,035,934	-				+0.2
3,035,934	-				+0.4
3,036,029	+				-0.8
3,036,072	+				+1.0
3,036,084	+				+0.0
3,036,085	-				+0.8
3,036,126	+				+0.0
3,036,127	-				-0.2
3,036,127	-				-1.3
3,036,144	+				+0.2
3,036,145	-				-1.8
3,036,179	+				-1.9