Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14130

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,033,003	-		DZA65_RS14125	0.80	+0.1
3,033,014	+		DZA65_RS14125	0.80	-0.6
3,033,015	-		DZA65_RS14125	0.81	-0.2
3,033,015	-		DZA65_RS14125	0.81	-0.3
3,033,016	+		DZA65_RS14125	0.81	+0.2
3,033,017	-		DZA65_RS14125	0.81	+0.7
3,033,017	-		DZA65_RS14125	0.81	+0.6
3,033,017	-		DZA65_RS14125	0.81	-1.2
3,033,054	-		DZA65_RS14125	0.84	-1.0
3,033,092	+		DZA65_RS14125	0.87	-1.1
3,033,093	-		DZA65_RS14125	0.87	+0.4
3,033,093	-		DZA65_RS14125	0.87	-0.6
3,033,116	+		DZA65_RS14125	0.88	+0.2
3,033,119	+		DZA65_RS14125	0.89	-0.9
3,033,119	+		DZA65_RS14125	0.89	-0.7
3,033,119	+		DZA65_RS14125	0.89	-1.4
3,033,137	-				-0.2
3,033,139	+				-1.2
3,033,139	+				-0.5
3,033,140	-				+0.4
3,033,140	-				-2.0
3,033,140	-				-0.5
3,033,143	+				+0.1
3,033,144	-				-0.8
3,033,210	+				+0.2
3,033,242	+				-1.6
3,033,294	+				-1.9
3,033,294	+				-0.2
3,033,295	-				+0.1
3,033,295	-				+0.4
3,033,316	+				-0.2
3,033,316	+				-0.7
3,033,317	-				-2.8
3,033,367	-				-1.2
3,033,421	+				+0.0
3,033,448	+				-1.2
3,033,448	+				+0.0
3,033,448	+				-0.2
3,033,449	-				-0.1
3,033,449	-				+0.4
3,033,463	-				-1.5
3,033,463	-				-1.4
3,033,463	-				-1.4
3,033,495	+				-0.3
3,033,495	+				+0.1
3,033,496	-				-1.2
3,033,498	-				-0.9
3,033,498	-				-0.3
3,033,500	+				-0.3
3,033,500	+				-0.8
3,033,500	+				-0.4
3,033,501	-				-1.4
3,033,501	-				-1.6
3,033,501	-				+0.7
3,033,501	-				+1.1
3,033,512	-				-1.4
3,033,540	-				-1.8
3,033,556	+				+0.4
3,033,556	+				-0.2
3,033,556	+				+0.7
3,033,556	+				+0.0
3,033,556	+				-1.4
3,033,557	-				-0.7
3,033,557	-				+1.4
3,033,557	-				-1.9
3,033,557	-				-1.2
3,033,560	+				-0.4
3,033,560	+				-2.3
3,033,560	+				-0.9
3,033,560	+				-0.2
3,033,560	+				-0.3
3,033,561	-				+2.4
3,033,561	-				-1.2
3,033,561	-				-0.6
3,033,589	-				+1.4
3,033,606	-				-2.2
3,033,652	+				-1.3
3,033,652	+				-1.8
3,033,657	+				-0.4
3,033,658	-				-0.9
3,033,661	-				-0.8
3,033,700	-				+0.0
3,033,706	+				+0.2
3,033,707	-				+0.8
3,033,790	+				-1.8
3,033,808	+				+0.8
3,033,809	-				-0.7
3,033,809	-				+0.9
3,033,809	-				+0.6
3,033,820	+				+0.8
3,033,853	+				+0.7
3,033,867	+				+1.4
3,033,868	-				-0.5
3,033,879	+				+1.0
3,033,879	+				-1.1
3,033,879	+				-0.2
3,033,879	+				+0.6
3,033,880	-				-0.4
3,033,880	-				+0.4
3,033,880	-				-0.9
3,033,880	-				-0.6
3,033,880	-				-0.2
3,033,880	-				-1.0
3,033,882	-				-0.4
3,033,882	-				+0.1
3,033,882	-				-0.9
3,033,882	-				+0.4
3,033,913	-				-1.4
3,033,924	+				-1.2
3,033,925	-				-0.8
3,033,927	+				-1.4
3,033,928	-				-2.2
3,033,976	+				-1.6
3,033,976	+				-0.5
3,033,993	+				-0.8
3,033,993	+				+0.4
3,033,994	-		DZA65_RS14130	0.10	-3.0
3,033,994	-		DZA65_RS14130	0.10	-1.8
3,033,994	-		DZA65_RS14130	0.10	+0.4
3,033,994	-		DZA65_RS14130	0.10	+1.0
3,033,994	-		DZA65_RS14130	0.10	+0.4
3,033,994	-		DZA65_RS14130	0.10	-0.3
3,033,994	-		DZA65_RS14130	0.10	+0.7
3,033,997	+		DZA65_RS14130	0.11	-0.6
3,033,997	+		DZA65_RS14130	0.11	-2.6
3,033,997	+		DZA65_RS14130	0.11	-1.2
3,033,998	-		DZA65_RS14130	0.12	-0.9
3,034,048	+		DZA65_RS14130	0.28	-0.9
3,034,122	+		DZA65_RS14130	0.51	-1.2
3,034,123	-		DZA65_RS14130	0.52	-1.2
3,034,123	-		DZA65_RS14130	0.52	-0.4
3,034,195	+		DZA65_RS14130	0.75	+1.4
3,034,271	+				+0.4
3,034,277	+				-0.0
3,034,277	+				-0.9
3,034,278	-				-0.5
3,034,278	-				-0.3
3,034,278	-				-1.0
3,034,283	+				+0.2
3,034,283	+				-0.3
3,034,283	+				-0.2
3,034,284	-				+0.6
3,034,284	-				-1.6
3,034,344	-		DZA65_RS14135	0.18	-0.8
3,034,354	-		DZA65_RS14135	0.20	-1.5
3,034,515	+		DZA65_RS14135	0.52	+0.6
3,034,515	+		DZA65_RS14135	0.52	+0.4
3,034,516	-		DZA65_RS14135	0.52	-0.1
3,034,516	-		DZA65_RS14135	0.52	+1.0
3,034,567	+		DZA65_RS14135	0.63	-0.3
3,034,722	+				-0.2
3,034,723	-				-1.0
3,034,777	+				-0.8
3,034,777	+				+1.1
3,034,777	-				-0.8
3,034,821	+		DZA65_RS14140	0.17	+0.7
3,034,869	+		DZA65_RS14140	0.27	-0.5
3,035,007	+		DZA65_RS14140	0.59	+1.4
3,035,019	+		DZA65_RS14140	0.61	+1.1
3,035,020	-		DZA65_RS14140	0.62	+0.6
3,035,020	-		DZA65_RS14140	0.62	-0.9
3,035,041	+		DZA65_RS14140	0.66	-0.9
3,035,074	+		DZA65_RS14140	0.74	+0.2
3,035,074	+		DZA65_RS14140	0.74	-0.4
3,035,075	-				+2.4
3,035,075	-		DZA65_RS14140	0.74	+2.7
3,035,121	-		DZA65_RS14140	0.85	-1.1
3,035,245	+				-0.4
3,035,245	+				+0.8
3,035,245	+				+0.4
3,035,245	+				-1.0
3,035,245	+				-0.8
3,035,246	-				+0.8
3,035,246	-				-0.9
3,035,246	-				+0.2
3,035,255	+				+0.4
3,035,256	-				+0.8