Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13800

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,962,506	+				+0.7
2,962,535	-				-0.2
2,962,535	-				-0.6
2,962,545	+				+0.4
2,962,546	-				-1.2
2,962,552	-				-1.1
2,962,552	-				-1.4
2,962,562	-				+0.1
2,962,611	+				-0.3
2,962,611	+				-1.2
2,962,612	-				-0.9
2,962,613	+				-0.5
2,962,613	+				-1.6
2,962,613	+				-0.6
2,962,613	+				-0.2
2,962,613	+				-2.2
2,962,613	+				-1.6
2,962,613	+				-1.7
2,962,613	+				-0.5
2,962,614	-				-1.1
2,962,614	-				+0.1
2,962,614	-				-0.3
2,962,614	-				-1.4
2,962,614	-				+1.0
2,962,614	-				-0.6
2,962,617	+				-0.2
2,962,617	+				+0.9
2,962,617	+				-0.9
2,962,617	+				-0.7
2,962,618	-				-0.8
2,962,618	-				-0.6
2,962,618	-				-1.3
2,962,650	+				+0.1
2,962,771	+				-0.2
2,962,774	+				-0.5
2,962,775	-				-1.3
2,962,775	-				-0.0
2,962,794	+				-1.2
2,962,795	-				-0.9
2,962,820	-				+2.0
2,962,953	+				-0.2
2,962,953	+				+1.4
2,962,953	+				-0.6
2,962,953	+				-1.8
2,962,953	+				+0.7
2,962,954	-				+2.0
2,962,954	-				-1.1
2,962,954	-				+1.0
2,962,955	+				+0.2
2,962,977	-				+0.9
2,963,007	+				+1.0
2,963,007	+				+1.3
2,963,007	+				+0.1
2,963,007	+				+0.2
2,963,007	+				+0.2
2,963,007	+				-0.6
2,963,007	+				-1.8
2,963,008	-				-0.2
2,963,008	-				-0.2
2,963,008	-				+0.2
2,963,009	+				-0.6
2,963,009	+				+0.4
2,963,009	+				-0.4
2,963,009	+				+0.6
2,963,009	+				-0.2
2,963,010	-				-0.3
2,963,010	-				-1.1
2,963,010	-				-1.0
2,963,010	-				-1.5
2,963,039	+				-0.1
2,963,119	+		DZA65_RS13800	0.15	-0.9
2,963,119	+		DZA65_RS13800	0.15	-0.1
2,963,119	+		DZA65_RS13800	0.15	-0.9
2,963,119	+		DZA65_RS13800	0.15	-1.4
2,963,120	-		DZA65_RS13800	0.15	+0.2
2,963,121	+		DZA65_RS13800	0.15	-1.1
2,963,121	+		DZA65_RS13800	0.15	-1.1
2,963,121	+		DZA65_RS13800	0.15	+0.9
2,963,121	+		DZA65_RS13800	0.15	-2.8
2,963,122	-		DZA65_RS13800	0.16	+0.4
2,963,122	-		DZA65_RS13800	0.16	-0.5
2,963,122	-		DZA65_RS13800	0.16	+1.4
2,963,122	-		DZA65_RS13800	0.16	-1.9
2,963,127	+		DZA65_RS13800	0.16	-0.6
2,963,127	+		DZA65_RS13800	0.16	+0.2
2,963,128	-		DZA65_RS13800	0.17	-0.8
2,963,128	-		DZA65_RS13800	0.17	-0.3
2,963,136	+		DZA65_RS13800	0.18	-0.6
2,963,136	+		DZA65_RS13800	0.18	+0.2
2,963,137	-		DZA65_RS13800	0.18	-1.6
2,963,137	-		DZA65_RS13800	0.18	+0.9
2,963,166	+		DZA65_RS13800	0.23	-0.3
2,963,166	+		DZA65_RS13800	0.23	-0.6
2,963,167	-		DZA65_RS13800	0.23	-1.3
2,963,167	-		DZA65_RS13800	0.23	-0.9
2,963,167	-		DZA65_RS13800	0.23	-1.1
2,963,180	+		DZA65_RS13800	0.25	-1.8
2,963,192	+		DZA65_RS13800	0.27	-0.8
2,963,267	+		DZA65_RS13800	0.38	+0.2
2,963,267	+		DZA65_RS13800	0.38	-0.1
2,963,268	-		DZA65_RS13800	0.38	-1.6
2,963,268	-		DZA65_RS13800	0.38	-0.2
2,963,319	+		DZA65_RS13800	0.46	-1.2
2,963,319	+		DZA65_RS13800	0.46	+1.0
2,963,320	-		DZA65_RS13800	0.47	+0.4
2,963,320	-		DZA65_RS13800	0.47	-0.9
2,963,320	-		DZA65_RS13800	0.47	-1.4
2,963,423	-		DZA65_RS13800	0.63	+0.7
2,963,423	-		DZA65_RS13800	0.63	-0.9
2,963,427	-		DZA65_RS13800	0.63	-0.8
2,963,427	-		DZA65_RS13800	0.63	-2.1
2,963,517	+		DZA65_RS13800	0.77	-0.8
2,963,517	+		DZA65_RS13800	0.77	-1.2
2,963,518	-		DZA65_RS13800	0.78	-0.9
2,963,518	-		DZA65_RS13800	0.78	-0.2
2,963,518	-		DZA65_RS13800	0.78	-1.5
2,963,539	+		DZA65_RS13800	0.81	-0.6
2,963,539	+		DZA65_RS13800	0.81	+0.2
2,963,540	-		DZA65_RS13800	0.81	-0.2
2,963,540	-		DZA65_RS13800	0.81	-0.6
2,963,598	+				+0.7
2,963,598	+				-1.3
2,963,599	-				+0.1
2,963,677	+				+0.2
2,963,678	-				+0.6
2,963,778	+				-2.2
2,963,778	+				+1.4
2,963,779	-				-1.6
2,963,781	+				-0.4
2,963,781	+				+1.4
2,963,781	+				-0.1
2,963,782	-				+0.8
2,963,807	+				+0.1
2,963,809	+				-0.4
2,963,809	+				-0.3
2,963,809	+				-0.6
2,963,810	-				-0.2
2,963,810	-				+0.9
2,963,810	-				-1.7
2,963,956	+				+0.6
2,963,956	+				-0.0
2,963,957	-				-1.8
2,963,993	-				-1.1
2,964,097	-				+1.4
2,964,099	-				+1.1
2,964,116	-				-0.8
2,964,123	-				-1.5
2,964,123	-				-0.2
2,964,123	-				-0.2
2,964,123	-				-0.6
2,964,127	-				-0.2
2,964,218	-				-0.0
2,964,230	+				-0.4
2,964,233	-				-0.6
2,964,288	+				+1.7
2,964,288	+				-1.7
2,964,308	+				-1.4
2,964,326	-				+0.4
2,964,340	-				-0.6
2,964,430	+				-1.4
2,964,430	+				-1.2
2,964,431	-				-3.2
2,964,491	+				+0.6
2,964,491	+				-1.6
2,964,492	-				+0.2
2,964,512	+				-1.6
2,964,552	-		DZA65_RS13810	0.11	+0.1
2,964,552	-		DZA65_RS13810	0.11	+0.8
2,964,567	-		DZA65_RS13810	0.12	-0.6
2,964,599	+		DZA65_RS13810	0.14	-0.9
2,964,600	-		DZA65_RS13810	0.14	-0.1
2,964,600	-		DZA65_RS13810	0.14	+0.8
2,964,605	-		DZA65_RS13810	0.15	-0.7
2,964,605	-		DZA65_RS13810	0.15	-1.8
2,964,655	+		DZA65_RS13810	0.18	-1.8
2,964,655	+		DZA65_RS13810	0.18	+0.4
2,964,656	-		DZA65_RS13810	0.18	-1.9
2,964,657	+		DZA65_RS13810	0.18	+0.1
2,964,659	+		DZA65_RS13810	0.18	-0.2
2,964,659	+		DZA65_RS13810	0.18	-1.2
2,964,659	+		DZA65_RS13810	0.18	+0.4