Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13585

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,917,155	+				+0.4
2,917,155	+				-0.5
2,917,326	+				+1.4
2,917,329	+				-1.4
2,917,359	-				-0.0
2,917,411	-				-0.8
2,917,413	-				-1.3
2,917,420	+				-0.6
2,917,429	+				-1.1
2,917,444	+				+0.4
2,917,453	-				+0.3
2,917,574	+				+0.1
2,917,575	-				-0.2
2,917,608	-				+0.6
2,917,619	+		DZA65_RS13580	0.11	+0.4
2,917,619	+		DZA65_RS13580	0.11	-0.8
2,917,651	+		DZA65_RS13580	0.17	+0.3
2,917,654	+		DZA65_RS13580	0.17	-0.8
2,917,654	+		DZA65_RS13580	0.17	+0.5
2,917,654	+		DZA65_RS13580	0.17	+1.0
2,917,655	-		DZA65_RS13580	0.17	+0.1
2,917,721	+		DZA65_RS13580	0.30	-0.5
2,917,722	-		DZA65_RS13580	0.30	-0.7
2,917,722	-		DZA65_RS13580	0.30	-1.0
2,917,722	-		DZA65_RS13580	0.30	-3.0
2,917,722	-		DZA65_RS13580	0.30	+0.6
2,917,780	+		DZA65_RS13580	0.41	-1.9
2,917,780	+		DZA65_RS13580	0.41	+0.4
2,917,780	+		DZA65_RS13580	0.41	-1.4
2,917,780	+		DZA65_RS13580	0.41	+0.2
2,917,781	-		DZA65_RS13580	0.41	-2.5
2,917,812	-		DZA65_RS13580	0.46	-2.9
2,917,812	-		DZA65_RS13580	0.46	-0.2
2,917,845	+		DZA65_RS13580	0.52	-0.5
2,917,845	+		DZA65_RS13580	0.52	+0.4
2,917,845	+		DZA65_RS13580	0.52	+0.1
2,917,845	+		DZA65_RS13580	0.52	+2.1
2,917,846	-		DZA65_RS13580	0.53	-0.1
2,917,846	-		DZA65_RS13580	0.53	-0.2
2,918,002	+		DZA65_RS13580	0.81	-1.4
2,918,002	+		DZA65_RS13580	0.81	-0.7
2,918,002	+		DZA65_RS13580	0.81	-0.6
2,918,002	+		DZA65_RS13580	0.81	+2.2
2,918,002	+		DZA65_RS13580	0.81	-0.0
2,918,003	-		DZA65_RS13580	0.82	+1.4
2,918,003	-		DZA65_RS13580	0.82	+1.1
2,918,003	-		DZA65_RS13580	0.82	-0.0
2,918,047	-		DZA65_RS13580	0.90	-0.4
2,918,060	+				-0.8
2,918,092	+				-1.6
2,918,092	+				-0.9
2,918,092	+				-1.6
2,918,093	-				-0.6
2,918,139	+				-1.4
2,918,253	+		DZA65_RS13585	0.11	+0.2
2,918,254	-		DZA65_RS13585	0.11	+0.4
2,918,254	-		DZA65_RS13585	0.11	+0.4
2,918,254	-		DZA65_RS13585	0.11	-0.1
2,918,273	+		DZA65_RS13585	0.13	+1.7
2,918,326	+		DZA65_RS13585	0.18	-1.4
2,918,470	+		DZA65_RS13585	0.32	-1.4
2,918,470	+		DZA65_RS13585	0.32	-0.9
2,918,471	-		DZA65_RS13585	0.32	-0.9
2,918,479	-		DZA65_RS13585	0.33	-0.2
2,918,515	+		DZA65_RS13585	0.37	-1.9
2,918,517	+		DZA65_RS13585	0.37	-2.1
2,918,517	+		DZA65_RS13585	0.37	+0.4
2,918,517	+		DZA65_RS13585	0.37	+0.6
2,918,517	+		DZA65_RS13585	0.37	-1.5
2,918,517	+		DZA65_RS13585	0.37	+0.9
2,918,518	-		DZA65_RS13585	0.37	+1.2
2,918,518	-		DZA65_RS13585	0.37	-0.6
2,918,716	+		DZA65_RS13585	0.56	+0.8
2,918,717	-		DZA65_RS13585	0.56	+1.6
2,918,729	+		DZA65_RS13585	0.58	-1.6
2,918,834	-		DZA65_RS13585	0.68	-0.2
2,919,062	-				-0.9
2,919,067	+				-1.3
2,919,112	+				+1.0
2,919,146	+				-0.9
2,919,146	+				-0.4
2,919,146	+				-0.6
2,919,146	+				+1.0
2,919,146	+				-0.6
2,919,146	+				-1.1
2,919,147	-				-0.9
2,919,147	-				-0.3
2,919,147	-				+0.4
2,919,147	-				-0.0
2,919,147	-				-0.9
2,919,147	-				+0.1
2,919,178	+				+0.8
2,919,178	+				+0.1
2,919,178	+				+0.6
2,919,178	+				-0.9
2,919,178	+				-1.5
2,919,222	+				-0.2
2,919,222	+				+1.5
2,919,223	-				+0.2
2,919,223	-				-0.1
2,919,223	-				-0.4
2,919,223	-				-3.2
2,919,239	+				-1.5
2,919,239	+				+0.1
2,919,240	-				+1.8
2,919,240	-				-0.2
2,919,240	-				-0.8
2,919,240	-				-0.7
2,919,240	-				+1.4
2,919,240	-				-0.8
2,919,240	-				-0.2
2,919,256	+				-0.2
2,919,256	+				-0.2
2,919,256	+				+1.1
2,919,256	+				-0.5
2,919,256	+				-0.2
2,919,256	+				-0.2
2,919,257	-				-2.6
2,919,257	-				-0.4
2,919,257	-				-0.1
2,919,257	-				-0.3
2,919,313	+				-2.1
2,919,313	+				-0.2
2,919,313	+				-0.6
2,919,313	+				-0.2
2,919,314	-				-0.6
2,919,314	-				-0.4
2,919,316	+				+3.0
2,919,316	+				-0.2
2,919,317	-				-0.1
2,919,407	+				-0.2
2,919,408	-				-1.6
2,919,462	-		DZA65_RS13590	0.12	-0.9
2,919,473	+		DZA65_RS13590	0.13	+0.5
2,919,536	+		DZA65_RS13590	0.21	-0.0
2,919,537	-		DZA65_RS13590	0.21	-1.8
2,919,537	-		DZA65_RS13590	0.21	-0.6
2,919,789	+		DZA65_RS13590	0.50	+0.1
2,919,789	+		DZA65_RS13590	0.50	+0.2
2,919,790	-		DZA65_RS13590	0.50	-0.7
2,919,790	-		DZA65_RS13590	0.50	-0.2
2,920,138	+				-0.2
2,920,138	+				-0.9
2,920,138	+				-1.3
2,920,138	+				+0.8
2,920,138	+				-0.9
2,920,142	+				-0.0