Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13575

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,914,962	+				+0.8
2,914,962	+				-0.5
2,914,962	+				+2.0
2,914,962	+				+1.4
2,914,962	+				-0.6
2,914,963	-				-0.4
2,915,159	+		DZA65_RS13570	0.19	-0.9
2,915,159	+		DZA65_RS13570	0.19	+1.1
2,915,160	-		DZA65_RS13570	0.19	+2.0
2,915,161	+		DZA65_RS13570	0.19	-0.4
2,915,162	-		DZA65_RS13570	0.19	+0.9
2,915,201	-		DZA65_RS13570	0.26	-0.4
2,915,278	+		DZA65_RS13570	0.41	-0.5
2,915,310	+		DZA65_RS13570	0.47	-0.6
2,915,311	-		DZA65_RS13570	0.47	+1.1
2,915,311	-		DZA65_RS13570	0.47	-1.4
2,915,311	-		DZA65_RS13570	0.47	-0.5
2,915,472	-		DZA65_RS13570	0.77	-0.6
2,915,562	-				-0.2
2,915,613	+				-0.2
2,915,614	-				-1.2
2,915,614	-				+0.8
2,915,617	+				-0.0
2,915,618	-				-0.5
2,915,647	+				-0.2
2,915,647	+				-0.6
2,915,648	-				+0.0
2,915,648	-				-1.2
2,915,648	-				+0.2
2,915,650	+				-0.6
2,915,650	+				+0.4
2,915,651	-				+0.0
2,915,667	+				-2.2
2,915,668	-				+0.4
2,915,668	-				+0.6
2,915,668	-				-0.6
2,915,668	-				-2.8
2,915,686	-				-1.2
2,915,731	-				-1.2
2,915,771	-				+0.1
2,915,786	-				-0.4
2,915,786	-				-1.4
2,915,810	+				+0.6
2,915,847	-				-0.3
2,915,859	+				-0.8
2,915,859	+				-0.7
2,915,860	-				-0.2
2,915,864	+				-0.7
2,915,864	+				-0.7
2,915,890	+				+1.4
2,916,056	+				-1.5
2,916,056	+				-1.2
2,916,056	+				-0.6
2,916,056	+				-0.1
2,916,057	-				-0.8
2,916,057	-				-1.5
2,916,074	-				+1.4
2,916,187	+		DZA65_RS13575	0.18	-0.6
2,916,187	+		DZA65_RS13575	0.18	-0.7
2,916,193	+		DZA65_RS13575	0.18	-0.9
2,916,193	+		DZA65_RS13575	0.18	-0.1
2,916,194	-		DZA65_RS13575	0.18	-1.2
2,916,213	-		DZA65_RS13575	0.19	-1.2
2,916,230	+		DZA65_RS13575	0.21	+0.2
2,916,231	-		DZA65_RS13575	0.21	-0.0
2,916,231	-		DZA65_RS13575	0.21	-0.2
2,916,231	-				+0.4
2,916,239	-		DZA65_RS13575	0.21	-0.2
2,916,411	-		DZA65_RS13575	0.35	-0.2
2,916,489	-		DZA65_RS13575	0.41	+0.6
2,916,552	-		DZA65_RS13575	0.45	-0.4
2,916,606	-		DZA65_RS13575	0.50	-0.2
2,916,606	-		DZA65_RS13575	0.50	-1.2
2,916,746	+		DZA65_RS13575	0.60	-1.2
2,916,861	-		DZA65_RS13575	0.69	+1.0
2,917,060	+		DZA65_RS13575	0.84	-1.6
2,917,060	+		DZA65_RS13575	0.84	-0.2
2,917,061	-		DZA65_RS13575	0.84	+0.6
2,917,061	-		DZA65_RS13575	0.84	-0.6
2,917,155	+				+0.4
2,917,155	+				-0.5
2,917,326	+				+1.4
2,917,329	+				-1.4
2,917,359	-				-0.0
2,917,411	-				-0.8
2,917,413	-				-1.3
2,917,420	+				-0.6
2,917,429	+				-1.1
2,917,444	+				+0.4
2,917,453	-				+0.3
2,917,574	+				+0.1
2,917,575	-				-0.2
2,917,608	-				+0.6
2,917,619	+		DZA65_RS13580	0.11	+0.4
2,917,619	+		DZA65_RS13580	0.11	-0.8
2,917,651	+		DZA65_RS13580	0.17	+0.3
2,917,654	+		DZA65_RS13580	0.17	-0.8
2,917,654	+		DZA65_RS13580	0.17	+0.5
2,917,654	+		DZA65_RS13580	0.17	+1.0
2,917,655	-		DZA65_RS13580	0.17	+0.1
2,917,721	+		DZA65_RS13580	0.30	-0.5
2,917,722	-		DZA65_RS13580	0.30	-0.7
2,917,722	-		DZA65_RS13580	0.30	-1.0
2,917,722	-		DZA65_RS13580	0.30	-3.0
2,917,722	-		DZA65_RS13580	0.30	+0.6
2,917,780	+		DZA65_RS13580	0.41	-1.9
2,917,780	+		DZA65_RS13580	0.41	+0.4
2,917,780	+		DZA65_RS13580	0.41	-1.4
2,917,780	+		DZA65_RS13580	0.41	+0.2
2,917,781	-		DZA65_RS13580	0.41	-2.5
2,917,812	-		DZA65_RS13580	0.46	-2.9
2,917,812	-		DZA65_RS13580	0.46	-0.2
2,917,845	+		DZA65_RS13580	0.52	-0.5
2,917,845	+		DZA65_RS13580	0.52	+0.4
2,917,845	+		DZA65_RS13580	0.52	+0.1
2,917,845	+		DZA65_RS13580	0.52	+2.1
2,917,846	-		DZA65_RS13580	0.53	-0.1
2,917,846	-		DZA65_RS13580	0.53	-0.2
2,918,002	+		DZA65_RS13580	0.81	-1.4
2,918,002	+		DZA65_RS13580	0.81	-0.7
2,918,002	+		DZA65_RS13580	0.81	-0.6
2,918,002	+		DZA65_RS13580	0.81	+2.2
2,918,002	+		DZA65_RS13580	0.81	-0.0
2,918,003	-		DZA65_RS13580	0.82	+1.4
2,918,003	-		DZA65_RS13580	0.82	+1.1
2,918,003	-		DZA65_RS13580	0.82	-0.0
2,918,047	-		DZA65_RS13580	0.90	-0.4
2,918,060	+				-0.8
2,918,092	+				-1.6
2,918,092	+				-0.9
2,918,092	+				-1.6
2,918,093	-				-0.6
2,918,139	+				-1.4
2,918,253	+		DZA65_RS13585	0.11	+0.2
2,918,254	-		DZA65_RS13585	0.11	+0.4
2,918,254	-		DZA65_RS13585	0.11	+0.4
2,918,254	-		DZA65_RS13585	0.11	-0.1