Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13380

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,867,246	+		DZA65_RS13375	0.74	+2.3
2,867,247	-		DZA65_RS13375	0.74	-1.0
2,867,247	-		DZA65_RS13375	0.74	+0.0
2,867,333	+		DZA65_RS13375	0.78	+0.3
2,867,333	+		DZA65_RS13375	0.78	+2.3
2,867,333	+				-0.2
2,867,334	-		DZA65_RS13375	0.78	+0.3
2,867,377	+		DZA65_RS13375	0.80	+0.1
2,867,377	+		DZA65_RS13375	0.80	-0.6
2,867,377	+		DZA65_RS13375	0.80	+0.3
2,867,377	+		DZA65_RS13375	0.80	+0.6
2,867,378	-		DZA65_RS13375	0.80	-2.6
2,867,378	-		DZA65_RS13375	0.80	+0.9
2,867,475	+		DZA65_RS13375	0.85	-1.5
2,867,475	+		DZA65_RS13375	0.85	-2.2
2,867,476	-		DZA65_RS13375	0.85	-1.7
2,867,476	-		DZA65_RS13375	0.85	-0.7
2,867,577	+		DZA65_RS13375	0.90	-0.7
2,867,577	+		DZA65_RS13375	0.90	+0.3
2,867,577	+		DZA65_RS13375	0.90	-0.5
2,867,578	-		DZA65_RS13375	0.90	-0.8
2,867,596	-				-1.0
2,867,596	-				-0.1
2,867,596	-				+0.3
2,867,602	+				-1.5
2,867,661	+				+1.3
2,867,662	-				-0.2
2,867,662	-				-1.8
2,867,702	+				+0.2
2,867,702	+				-0.2
2,867,703	-				-0.8
2,867,703	-				+0.8
2,867,703	-				-0.7
2,867,703	-				-0.2
2,867,710	+				+0.2
2,867,710	+				-1.0
2,867,711	-				-2.4
2,867,711	-				+0.3
2,867,711	-				-0.1
2,867,711	-				-2.2
2,867,711	-				-3.0
2,867,803	+				-1.5
2,867,803	+				-0.3
2,867,804	-				+0.2
2,867,827	+				-0.1
2,867,827	+				+1.8
2,867,827	+				+0.7
2,867,828	-				-0.2
2,867,830	+				-1.0
2,867,830	+				-1.2
2,867,830	+				-1.7
2,867,830	+				-1.0
2,867,831	-				-0.4
2,867,831	-				+0.0
2,867,831	-				-1.4
2,867,831	-				-0.6
2,867,831	-				-0.7
2,867,831	-				-0.4
2,867,831	-				-1.6
2,867,875	+				-2.5
2,867,876	-				+0.8
2,867,894	+				-0.7
2,867,914	+				-0.4
2,867,914	+				-1.5
2,867,914	+				+1.5
2,867,915	-				+0.8
2,867,915	-				-1.0
2,867,916	+				+0.7
2,867,916	+				+0.5
2,867,916	+				+1.9
2,867,916	+				+0.8
2,867,916	+				+0.6
2,867,916	+				+0.0
2,867,916	+				-2.0
2,867,917	-				-0.9
2,867,917	-				+0.1
2,867,917	-				+1.3
2,867,917	-				-0.4
2,867,917	-				-1.2
2,867,920	+				+0.1
2,867,920	+				+0.2
2,867,920	+				-2.4
2,867,920	+				-2.4
2,867,920	+				-1.4
2,867,920	+				-1.6
2,867,920	+				-1.2
2,867,921	-				-1.5
2,867,921	-				-1.2
2,867,953	+				+0.3
2,867,987	+				+0.9
2,867,987	+				-2.0
2,867,988	-				-1.0
2,868,313	+		DZA65_RS13380	0.30	-2.5
2,868,313	+		DZA65_RS13380	0.30	-0.7
2,868,478	-		DZA65_RS13380	0.45	-1.5
2,868,735	+		DZA65_RS13380	0.69	-0.0
2,868,787	+		DZA65_RS13380	0.73	-0.2
2,868,788	-		DZA65_RS13380	0.73	-2.0
2,868,856	+		DZA65_RS13380	0.80	-1.2
2,868,857	-		DZA65_RS13380	0.80	-0.2
2,869,065	+				-0.4
2,869,066	-				-0.7
2,869,073	+				+0.0
2,869,112	+				-2.1
2,869,113	-				+0.3
2,869,124	-				-0.5
2,869,136	-				-1.7
2,869,136	-				+0.0
2,869,140	+				+0.3
2,869,141	-				+0.1
2,869,141	-				-1.3
2,869,141	-				-0.3
2,869,142	+				-0.8
2,869,142	+				-0.3
2,869,142	+				-0.5
2,869,160	+				-0.5
2,869,160	+				-0.8
2,869,160	+				-1.3
2,869,160	+				-1.8
2,869,161	-				+0.5
2,869,161	-				+0.7
2,869,167	+				-0.1
2,869,167	+				+0.0
2,869,168	-				+0.1
2,869,175	+				-0.3
2,869,176	-				-0.3
2,869,198	+				-2.3
2,869,198	+				-1.0
2,869,198	+				-1.8
2,869,199	-				+0.7
2,869,199	-				+0.7
2,869,235	+				+0.6
2,869,558	+		DZA65_RS13385	0.68	+0.7
2,869,558	+		DZA65_RS13385	0.68	+0.3
2,869,559	-		DZA65_RS13385	0.68	-1.0
2,869,604	+		DZA65_RS13385	0.76	+0.1
2,869,604	+		DZA65_RS13385	0.76	-1.2
2,869,604	+		DZA65_RS13385	0.76	+1.1
2,869,605	-		DZA65_RS13385	0.76	-1.3
2,869,650	+		DZA65_RS13385	0.84	+0.1
2,869,703	-				+0.7
2,869,715	+				-1.3
2,869,742	+				-0.3
2,869,752	+				-0.9
2,869,752	+				+0.0
2,869,752	+				-0.7
2,869,752	+				+0.9
2,869,752	+				-1.3
2,869,752	+				-0.5
2,869,752	+				-1.0
2,869,752	+				-0.7
2,869,752	+				-1.7
2,869,753	-				-0.4
2,869,753	-				+0.1
2,869,753	-				+0.6
2,869,753	-				-0.9
2,869,753	-				-1.6
2,869,753	-				-1.3
2,869,755	+				-1.7
2,869,755	+				-0.1
2,869,755	+				-1.0
2,869,755	+				-2.4
2,869,756	-				-2.3
2,869,756	-				-0.5
2,869,756	-				-0.3
2,869,777	+				-0.7
2,869,777	+				-0.1
2,869,777	+				+0.6
2,869,777	+				+0.1
2,869,778	-				-1.5
2,869,778	-				-0.8
2,869,778	-				-0.1
2,869,778	-				-0.4
2,869,778	-				+0.3
2,869,784	+				-0.4
2,869,842	+				-0.5
2,869,843	-				+0.1
2,869,860	-				-0.7
2,869,972	+				+1.0
2,869,973	-				-1.7
2,870,016	-				-0.9
2,870,017	+				+0.0
2,870,018	-				-0.5
2,870,038	+				-1.4
2,870,039	-				-0.0