Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13020

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,792,227	+		DZA65_RS13015	0.15	-0.0
2,792,235	+		DZA65_RS13015	0.16	+0.4
2,792,235	+		DZA65_RS13015	0.16	-0.6
2,792,235	+		DZA65_RS13015	0.16	+0.2
2,792,236	-		DZA65_RS13015	0.16	-0.2
2,792,236	-		DZA65_RS13015	0.16	-0.6
2,792,236	-		DZA65_RS13015	0.16	-0.4
2,792,263	+		DZA65_RS13015	0.20	-1.2
2,792,263	+		DZA65_RS13015	0.20	+0.4
2,792,369	+		DZA65_RS13015	0.35	-1.8
2,792,370	-		DZA65_RS13015	0.35	-1.6
2,792,370	-		DZA65_RS13015	0.35	-0.8
2,792,452	-		DZA65_RS13015	0.47	+0.1
2,792,568	+		DZA65_RS13015	0.64	-0.3
2,792,568	+		DZA65_RS13015	0.64	-0.6
2,792,568	+		DZA65_RS13015	0.64	-0.5
2,792,569	-		DZA65_RS13015	0.64	+0.8
2,792,569	-		DZA65_RS13015	0.64	-0.2
2,792,569	-		DZA65_RS13015	0.64	-0.9
2,792,569	-		DZA65_RS13015	0.64	+1.4
2,792,569	-		DZA65_RS13015	0.64	-0.5
2,792,569	-		DZA65_RS13015	0.64	+0.4
2,792,676	+		DZA65_RS13015	0.79	+0.1
2,792,676	+		DZA65_RS13015	0.79	-0.4
2,792,677	-		DZA65_RS13015	0.80	+0.4
2,792,695	+		DZA65_RS13015	0.82	+2.0
2,792,695	+		DZA65_RS13015	0.82	-0.9
2,792,840	+				-0.6
2,792,840	+				-1.2
2,792,841	-				-0.9
2,792,845	+				+0.3
2,792,846	-				-1.2
2,792,846	-				-0.2
2,792,846	-				-0.4
2,792,873	+				-0.2
2,792,969	-				-1.8
2,792,970	+				-2.3
2,792,970	+				-0.2
2,792,971	-				-1.4
2,792,971	-				-0.9
2,792,971	-				+0.7
2,792,974	+				-0.3
2,792,975	-				-0.9
2,793,042	+				-0.1
2,793,043	-				-0.3
2,793,043	-				+1.5
2,793,043	-				-0.6
2,793,044	+				-0.9
2,793,044	+				-1.2
2,793,045	-				+0.3
2,793,045	-				-0.9
2,793,045	-				-1.6
2,793,086	+				-0.7
2,793,086	+				-0.6
2,793,110	+				+1.1
2,793,110	+				+0.4
2,793,110	+				+0.4
2,793,129	+				+0.2
2,793,129	+				-2.9
2,793,129	+				+0.2
2,793,129	+				+1.1
2,793,129	+				-0.3
2,793,130	-				-1.3
2,793,146	+				+0.4
2,793,146	+				-0.5
2,793,146	+				-0.2
2,793,164	-				+0.2
2,793,206	+		DZA65_RS13020	0.18	+1.4
2,793,214	+		DZA65_RS13020	0.21	-0.3
2,793,215	-		DZA65_RS13020	0.22	-0.2
2,793,260	+		DZA65_RS13020	0.43	+1.4
2,793,261	-		DZA65_RS13020	0.43	-1.2
2,793,261	-		DZA65_RS13020	0.43	+0.3
2,793,263	+		DZA65_RS13020	0.44	+0.4
2,793,263	+		DZA65_RS13020	0.44	-0.3
2,793,264	-		DZA65_RS13020	0.44	-0.5
2,793,381	+				-0.8
2,793,382	-				-0.4
2,793,382	-				-0.1
2,793,419	+				+0.2
2,793,470	+				-0.1
2,793,471	-				-3.0
2,793,471	-				-0.9
2,793,506	+				-0.9
2,793,733	+		DZA65_RS13025	0.70	-0.9
2,793,733	+		DZA65_RS13025	0.70	+0.8
2,793,734	-		DZA65_RS13025	0.70	-0.9
2,793,803	+				-0.8
2,793,803	+				+0.7
2,793,803	+				-2.7
2,793,803	+				-1.2
2,793,803	+				-1.6
2,793,804	-				-0.2
2,793,804	-				-1.0
2,793,804	-				-1.4
2,793,916	+		DZA65_RS13030	0.11	+0.1
2,793,916	+		DZA65_RS13030	0.11	-1.5
2,793,916	+		DZA65_RS13030	0.11	+0.8
2,793,916	+		DZA65_RS13030	0.11	-0.6
2,793,916	+		DZA65_RS13030	0.11	-0.0
2,793,916	+		DZA65_RS13030	0.11	-0.6
2,793,916	+		DZA65_RS13030	0.11	-0.2
2,793,916	+		DZA65_RS13030	0.11	+1.2
2,793,917	-		DZA65_RS13030	0.11	+0.8
2,793,917	-		DZA65_RS13030	0.11	-0.1
2,793,917	-		DZA65_RS13030	0.11	+0.4
2,793,917	-		DZA65_RS13030	0.11	-0.9
2,793,917	-		DZA65_RS13030	0.11	-1.8
2,793,917	-		DZA65_RS13030	0.11	-1.2
2,793,917	-		DZA65_RS13030	0.11	-1.4
2,793,917	-		DZA65_RS13030	0.11	-0.9
2,793,917	-		DZA65_RS13030	0.11	-0.2
2,793,917	-		DZA65_RS13030	0.11	-0.8
2,793,953	+		DZA65_RS13030	0.16	-1.5
2,793,954	-		DZA65_RS13030	0.16	-0.2
2,793,954	-		DZA65_RS13030	0.16	-0.5
2,793,954	-		DZA65_RS13030	0.16	-0.3
2,793,954	-		DZA65_RS13030	0.16	+0.6
2,793,954	-		DZA65_RS13030	0.16	-1.2
2,793,954	-		DZA65_RS13030	0.16	-1.8
2,793,956	+		DZA65_RS13030	0.16	-1.6
2,793,956	+		DZA65_RS13030	0.16	-0.6
2,793,957	-		DZA65_RS13030	0.17	+0.7
2,794,170	-		DZA65_RS13030	0.45	+0.2
2,794,272	+		DZA65_RS13030	0.58	+1.4
2,794,272	+		DZA65_RS13030	0.58	-0.3
2,794,272	+		DZA65_RS13030	0.58	-0.9
2,794,272	+		DZA65_RS13030	0.58	+0.2
2,794,273	-		DZA65_RS13030	0.58	-0.9
2,794,273	-		DZA65_RS13030	0.58	-1.1