Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12915

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,767,881	-		DZA65_RS12910	0.46	+0.7
2,767,902	-		DZA65_RS12910	0.47	-0.2
2,768,112	+		DZA65_RS12910	0.61	-1.2
2,768,112	+		DZA65_RS12910	0.61	-0.3
2,768,112	+		DZA65_RS12910	0.61	+0.8
2,768,113	-		DZA65_RS12910	0.61	-0.3
2,768,113	-		DZA65_RS12910	0.61	+0.4
2,768,113	-		DZA65_RS12910	0.61	-1.4
2,768,113	-		DZA65_RS12910	0.61	+0.1
2,768,146	-		DZA65_RS12910	0.63	+1.4
2,768,508	+		DZA65_RS12910	0.86	+0.7
2,768,516	-		DZA65_RS12910	0.87	+0.4
2,768,595	+				+0.4
2,768,606	+				+0.1
2,768,650	-				-0.2
2,768,650	-				-0.4
2,768,711	-				-0.4
2,768,711	-				+1.4
2,768,728	+				-0.6
2,768,728	+				+0.3
2,768,728	+				-0.2
2,768,728	+				-0.2
2,768,729	-				-1.0
2,768,729	-				-0.8
2,768,729	-				-0.2
2,768,772	+				+1.4
2,768,772	+				-0.6
2,768,772	+				-0.2
2,768,772	+				+0.7
2,768,773	-				-0.4
2,768,773	-				-0.9
2,768,773	-				-0.8
2,768,773	-				-0.9
2,768,773	-				+0.2
2,768,843	+				+0.0
2,768,843	+				-1.5
2,768,844	-				+1.4
2,768,844	-				-1.1
2,768,844	-				-0.9
2,768,844	-				+1.4
2,768,910	+				+0.2
2,768,910	+				+0.1
2,768,912	+				-0.4
2,768,912	+				+0.1
2,768,912	+				+1.4
2,768,912	+				-0.3
2,768,912	+				-1.0
2,768,912	+				+0.8
2,768,912	+				-1.9
2,768,912	+				+0.1
2,768,912	+				-0.6
2,768,913	-				+0.7
2,768,913	-				-0.5
2,768,913	-				-0.5
2,768,913	-				-0.4
2,768,913	-				+0.4
2,768,913	-				-2.6
2,768,913	-				-1.1
2,768,916	+				-0.1
2,768,928	+				+1.0
2,768,928	+				-1.5
2,768,928	+				+1.4
2,768,929	-				+0.7
2,768,929	-				+1.0
2,769,120	+		DZA65_RS12915	0.18	+0.7
2,769,121	-		DZA65_RS12915	0.18	+0.3
2,769,186	+		DZA65_RS12915	0.22	+0.3
2,769,224	+		DZA65_RS12915	0.24	-1.6
2,769,224	+		DZA65_RS12915	0.24	+0.2
2,769,225	-		DZA65_RS12915	0.25	+1.1
2,769,225	-		DZA65_RS12915	0.25	-1.6
2,769,225	-		DZA65_RS12915	0.25	+0.1
2,769,225	-		DZA65_RS12915	0.25	-1.6
2,769,225	-				+2.1
2,769,225	-		DZA65_RS12915	0.25	+0.0
2,769,241	+		DZA65_RS12915	0.26	-2.2
2,769,241	+		DZA65_RS12915	0.26	-0.2
2,769,245	+		DZA65_RS12915	0.26	-0.9
2,769,245	+		DZA65_RS12915	0.26	-2.9
2,769,246	-		DZA65_RS12915	0.26	+0.1
2,769,246	-		DZA65_RS12915	0.26	+1.1
2,769,263	+		DZA65_RS12915	0.27	-0.6
2,769,263	+		DZA65_RS12915	0.27	-0.1
2,769,264	-		DZA65_RS12915	0.27	-0.6
2,769,269	+		DZA65_RS12915	0.27	-1.2
2,769,269	+		DZA65_RS12915	0.27	-0.1
2,769,269	+		DZA65_RS12915	0.27	-1.8
2,769,269	+		DZA65_RS12915	0.27	-1.6
2,769,270	-		DZA65_RS12915	0.27	-0.2
2,769,270	-		DZA65_RS12915	0.27	-0.6
2,769,270	-		DZA65_RS12915	0.27	+0.4
2,769,295	-		DZA65_RS12915	0.29	+0.3
2,769,295	-		DZA65_RS12915	0.29	-0.1
2,769,303	+		DZA65_RS12915	0.30	+0.2
2,769,303	+		DZA65_RS12915	0.30	-0.6
2,769,304	-		DZA65_RS12915	0.30	-0.7
2,769,306	+		DZA65_RS12915	0.30	-0.3
2,769,306	+		DZA65_RS12915	0.30	-0.5
2,769,307	-		DZA65_RS12915	0.30	+0.4
2,769,335	+		DZA65_RS12915	0.32	-0.5
2,769,335	+		DZA65_RS12915	0.32	-0.5
2,769,335	+		DZA65_RS12915	0.32	-1.3
2,769,336	-		DZA65_RS12915	0.32	-0.9
2,769,487	+		DZA65_RS12915	0.41	+1.1
2,769,487	+		DZA65_RS12915	0.41	+0.4
2,769,487	+		DZA65_RS12915	0.41	+0.1
2,769,487	+		DZA65_RS12915	0.41	+0.2
2,769,488	-		DZA65_RS12915	0.41	-0.7
2,769,488	-		DZA65_RS12915	0.41	-1.4
2,769,488	-		DZA65_RS12915	0.41	-0.4
2,769,527	+		DZA65_RS12915	0.44	-0.7
2,769,527	+		DZA65_RS12915	0.44	+1.2
2,769,527	+		DZA65_RS12915	0.44	-0.3
2,769,527	+		DZA65_RS12915	0.44	+0.9
2,769,528	-		DZA65_RS12915	0.44	-1.9
2,769,528	-		DZA65_RS12915	0.44	-0.0
2,769,528	-		DZA65_RS12915	0.44	-1.2
2,769,528	-		DZA65_RS12915	0.44	-1.1
2,769,708	+		DZA65_RS12915	0.56	+0.2
2,769,708	+		DZA65_RS12915	0.56	-0.0
2,769,708	+		DZA65_RS12915	0.56	+0.1
2,769,708	+		DZA65_RS12915	0.56	-0.7
2,769,709	-		DZA65_RS12915	0.56	-1.9
2,769,709	-		DZA65_RS12915	0.56	-0.6
2,769,711	+		DZA65_RS12915	0.56	-0.9
2,769,711	+		DZA65_RS12915	0.56	-0.1
2,769,711	+		DZA65_RS12915	0.56	-0.9
2,769,712	-		DZA65_RS12915	0.56	-1.9
2,769,712	-		DZA65_RS12915	0.56	+0.3
2,769,712	-		DZA65_RS12915	0.56	+1.4
2,769,712	-		DZA65_RS12915	0.56	+0.6
2,769,847	-		DZA65_RS12915	0.64	-1.4
2,769,996	+		DZA65_RS12915	0.74	+0.7
2,770,133	+		DZA65_RS12915	0.83	+0.4
2,770,133	+		DZA65_RS12915	0.83	-0.4
2,770,134	-		DZA65_RS12915	0.83	-0.7
2,770,134	-		DZA65_RS12915	0.83	+0.2
2,770,134	-		DZA65_RS12915	0.83	+0.4
2,770,134	-		DZA65_RS12915	0.83	+0.5
2,770,171	-		DZA65_RS12915	0.85	-0.8
2,770,173	+		DZA65_RS12915	0.85	+0.4
2,770,173	+		DZA65_RS12915	0.85	-0.8
2,770,173	+		DZA65_RS12915	0.85	+0.1
2,770,173	+		DZA65_RS12915	0.85	+0.4
2,770,174	-		DZA65_RS12915	0.85	-1.1
2,770,174	-		DZA65_RS12915	0.85	+0.4
2,770,174	-		DZA65_RS12915	0.85	-0.4
2,770,174	-		DZA65_RS12915	0.85	+0.4
2,770,174	-		DZA65_RS12915	0.85	-0.8
2,770,174	-		DZA65_RS12915	0.85	-0.9
2,770,272	-				+0.4
2,770,272	-				-0.5
2,770,387	-				+0.4
2,770,404	+				-0.2
2,770,404	+				-1.8
2,770,404	+				-1.8
2,770,404	+				-2.6
2,770,404	+				-0.9
2,770,404	+				-0.6
2,770,404	+				+0.4
2,770,404	+				-0.2
2,770,404	+				-0.6
2,770,404	+				+0.8
2,770,404	+				-0.1
2,770,404	+				-1.2
2,770,404	+				-0.9
2,770,404	+				-1.3
2,770,404	+				-0.5
2,770,405	-				+0.4
2,770,405	-				-0.3
2,770,405	-				-0.7
2,770,405	-				+0.6
2,770,405	-				-1.4
2,770,405	-				-0.8
2,770,405	-				-0.2
2,770,405	-				-0.4
2,770,405	-				-0.1
2,770,405	-				-1.8
2,770,405	-				+0.7
2,770,405	-				-0.4
2,770,405	-				-0.6
2,770,405	-				+0.6
2,770,405	-				-0.9
2,770,408	+				-0.9
2,770,408	+				+0.8
2,770,409	-				+0.9
2,770,409	-				+2.4
2,770,409	-				-0.5
2,770,409	-				-0.8
2,770,409	-				-0.2
2,770,508	+				-0.4
2,770,509	-				-0.8
2,770,517	+				-0.6
2,770,521	+				+0.4
2,770,521	+				-0.6
2,770,521	+				-1.2
2,770,526	-				+0.7
2,770,530	-				-0.2
2,770,534	+				+1.4
2,770,535	-				+0.4
2,770,547	+				+0.4
2,770,551	+				-0.4
2,770,598	-				-1.9
2,770,598	-				+0.4
2,770,598	-				-0.6
2,770,606	+				+0.6
2,770,606	+				-0.2
2,770,606	+				-0.8
2,770,606	+				-0.2
2,770,606	+				-0.2
2,770,606	+				+0.7
2,770,607	-				-0.2
2,770,607	-				+0.2
2,770,607	-				-0.6
2,770,607	-				-0.6
2,770,607	-				+0.8
2,770,607	-				-0.9
2,770,608	+				+0.4
2,770,608	+				-0.4
2,770,608	+				+0.7
2,770,608	+				-0.2
2,770,608	+				-0.9
2,770,608	+				-1.4
2,770,608	+				-0.2
2,770,608	+				-0.8
2,770,608	+				-0.6
2,770,609	-				-1.3
2,770,609	-				-1.4
2,770,609	-				-2.5
2,770,609	-				-0.8
2,770,609	-				-0.9
2,770,609	-				+0.5
2,770,609	-				-0.4
2,770,609	-				+0.4
2,770,612	+				-0.9
2,770,612	+				-0.6
2,770,612	+				-0.2
2,770,613	-				-0.5
2,770,613	-				-0.3
2,770,613	-				-0.6
2,770,613	-				-0.9
2,770,643	+				-1.4
2,770,643	+				-1.7
2,770,644	-				-2.1
2,770,644	-				-0.8
2,770,644	-				-0.4
2,770,644	-				+1.4
2,770,644	-				-0.2
2,770,644	-				-0.7
2,770,645	+				-1.6
2,770,646	-				-0.8
2,770,675	-				-0.2
2,770,688	+				+0.6
2,770,688	+				-1.5
2,770,689	-				-0.4
2,770,689	-				-1.6
2,770,689	-				-0.6
2,770,742	-				+0.7
2,770,742	-				+0.4
2,770,742	-				+0.2
2,770,742	-				+1.4
2,770,742	-				-1.6
2,770,820	-				+0.1
2,770,846	-				-1.5
2,770,846	-				-0.8
2,770,908	+		DZA65_RS12920	0.13	-1.2
2,770,943	-		DZA65_RS12920	0.15	-0.1
2,770,962	+		DZA65_RS12920	0.17	+0.4
2,770,971	+		DZA65_RS12920	0.17	-0.2
2,770,972	-		DZA65_RS12920	0.18	+0.2
2,770,972	-		DZA65_RS12920	0.18	+0.8
2,770,972	-		DZA65_RS12920	0.18	+2.4
2,770,972	-		DZA65_RS12920	0.18	+0.2
2,770,972	-		DZA65_RS12920	0.18	+0.3
2,770,972	-		DZA65_RS12920	0.18	+0.8
2,770,998	+		DZA65_RS12920	0.19	-1.1
2,770,998	+		DZA65_RS12920	0.19	-0.3
2,770,998	+		DZA65_RS12920	0.19	-0.4
2,770,998	+		DZA65_RS12920	0.19	-1.2
2,770,999	-		DZA65_RS12920	0.20	+0.1
2,770,999	-		DZA65_RS12920	0.20	-0.6
2,771,124	+		DZA65_RS12920	0.29	-1.2
2,771,135	+		DZA65_RS12920	0.30	+0.7
2,771,135	+		DZA65_RS12920	0.30	-0.2
2,771,136	-		DZA65_RS12920	0.30	-0.5
2,771,136	-		DZA65_RS12920	0.30	-0.8
2,771,139	-		DZA65_RS12920	0.30	-0.8
2,771,178	+		DZA65_RS12920	0.33	-0.1
2,771,179	-		DZA65_RS12920	0.33	+0.8
2,771,269	+		DZA65_RS12920	0.40	+0.7
2,771,269	+		DZA65_RS12920	0.40	-0.6
2,771,269	+		DZA65_RS12920	0.40	-0.2
2,771,270	-		DZA65_RS12920	0.40	+0.7
2,771,270	-		DZA65_RS12920	0.40	+0.2
2,771,270	-		DZA65_RS12920	0.40	-0.1
2,771,321	-		DZA65_RS12920	0.43	-1.2
2,771,350	+		DZA65_RS12920	0.46	-1.9
2,771,350	+		DZA65_RS12920	0.46	-0.3
2,771,350	+		DZA65_RS12920	0.46	-0.2
2,771,350	+		DZA65_RS12920	0.46	-0.9
2,771,351	-		DZA65_RS12920	0.46	-0.9
2,771,351	-		DZA65_RS12920	0.46	+0.7
2,771,351	-		DZA65_RS12920	0.46	-0.2