Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12870

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,757,622	-		DZA65_RS12865	0.67	+2.4
2,757,622	-		DZA65_RS12865	0.67	-1.3
2,757,622	-		DZA65_RS12865	0.67	+2.1
2,757,622	-		DZA65_RS12865	0.67	-1.1
2,757,767	-		DZA65_RS12865	0.76	-0.5
2,757,798	+		DZA65_RS12865	0.78	+1.4
2,757,798	+		DZA65_RS12865	0.78	-0.6
2,757,798	+		DZA65_RS12865	0.78	-1.2
2,757,798	+		DZA65_RS12865	0.78	+1.0
2,757,799	-		DZA65_RS12865	0.78	-0.0
2,757,799	-		DZA65_RS12865	0.78	-0.1
2,757,865	+		DZA65_RS12865	0.82	-0.3
2,757,865	+		DZA65_RS12865	0.82	-0.7
2,757,883	+		DZA65_RS12865	0.83	-0.2
2,757,965	-		DZA65_RS12865	0.88	-0.8
2,757,995	-		DZA65_RS12865	0.90	-0.0
2,757,995	-		DZA65_RS12865	0.90	+0.1
2,758,110	-				+3.0
2,758,173	+				+0.5
2,758,173	+				+1.4
2,758,174	-				-0.6
2,758,177	+				-0.2
2,758,177	+				-1.1
2,758,177	+				-0.6
2,758,177	+				-2.5
2,758,178	-				-0.6
2,758,308	+				+1.4
2,758,309	-				-2.0
2,758,310	+				+0.6
2,758,310	+				-0.0
2,758,311	-				+1.1
2,758,311	-				-2.3
2,758,369	+				-0.7
2,758,369	+				-1.2
2,758,370	-				+0.8
2,758,370	-				-1.4
2,758,370	-				-0.8
2,758,403	+				-0.2
2,758,404	-				+0.6
2,758,408	+				-0.3
2,758,408	+				+0.4
2,758,408	+				-0.7
2,758,408	+				+0.8
2,758,409	-				-0.2
2,758,531	+				-0.9
2,758,531	+				-0.0
2,758,532	-				-0.0
2,758,619	+				-0.4
2,758,620	-				-0.2
2,758,753	+		DZA65_RS12870	0.28	-0.5
2,758,753	+		DZA65_RS12870	0.28	-0.6
2,758,753	+		DZA65_RS12870	0.28	-1.2
2,758,753	+		DZA65_RS12870	0.28	-2.2
2,758,754	-		DZA65_RS12870	0.28	+0.7
2,758,754	-		DZA65_RS12870	0.28	+0.7
2,758,754	-		DZA65_RS12870	0.28	-0.9
2,758,754	-		DZA65_RS12870	0.28	-0.1
2,758,754	-		DZA65_RS12870	0.28	-1.8
2,758,754	-		DZA65_RS12870	0.28	-1.8
2,758,858	+		DZA65_RS12870	0.42	-1.6
2,758,859	-		DZA65_RS12870	0.42	+0.6
2,758,916	-		DZA65_RS12870	0.50	-1.8
2,759,229	-				+0.8
2,759,270	+				-0.6
2,759,271	-				+0.8
2,759,310	+				-1.5
2,759,332	+				+0.4
2,759,332	+				+1.2
2,759,332	+				-2.1
2,759,332	+				-1.8
2,759,332	+				-0.2
2,759,332	+				+1.0
2,759,332	+				-0.6
2,759,332	+				-0.4
2,759,332	+				-0.6
2,759,332	+				-0.9
2,759,332	+				-1.9
2,759,332	+				-0.3
2,759,332	+				+1.0
2,759,333	-				+0.2
2,759,333	-				-0.2
2,759,333	-				-0.4
2,759,333	-				-0.2
2,759,333	-				+0.1
2,759,378	-				-0.3
2,759,463	+		DZA65_RS12875	0.25	-1.6
2,759,489	+		DZA65_RS12875	0.30	-0.6
2,759,535	-		DZA65_RS12875	0.39	-1.2
2,759,564	+		DZA65_RS12875	0.45	-0.2
2,759,567	+		DZA65_RS12875	0.46	-1.4
2,759,567	+		DZA65_RS12875	0.46	+0.1
2,759,568	-		DZA65_RS12875	0.46	-0.9
2,759,568	-		DZA65_RS12875	0.46	+0.1
2,759,689	-		DZA65_RS12875	0.70	-2.6
2,759,772	+		DZA65_RS12875	0.86	-0.2
2,759,772	+		DZA65_RS12875	0.86	+0.4
2,759,772	+		DZA65_RS12875	0.86	-0.3
2,759,772	+		DZA65_RS12875	0.86	+0.2
2,759,772	+		DZA65_RS12875	0.86	+1.1
2,759,773	-		DZA65_RS12875	0.87	+0.8
2,759,811	+				+1.8
2,759,811	+				-0.4
2,759,811	+				-0.9
2,759,812	-				-1.2
2,759,812	-				+0.8
2,759,838	+				-0.2
2,759,839	-				-1.9
2,759,839	-				+1.8
2,759,864	-				-1.8
2,759,869	+				-1.5
2,759,869	+				-0.8
2,759,869	+				+0.6
2,759,869	+				+0.8
2,759,869	+				-1.5
2,759,869	+				+0.4
2,759,870	-				+0.2
2,759,870	-				-0.8
2,759,870	-				-0.6
2,759,870	-				-0.3
2,759,870	-				-0.7
2,759,888	-				-1.2
2,759,888	-				+0.4
2,759,899	+				-1.3
2,759,932	-				-0.2
2,759,932	-				-0.9
2,759,932	-				+0.4
2,759,935	+				-0.7
2,759,935	+				-1.3
2,759,935	+				-2.2
2,759,936	-				-1.4
2,759,936	-				+1.4
2,759,936	-				-0.0
2,759,936	-				-0.2
2,759,936	-				-0.5
2,759,985	+				-0.8
2,759,986	-				+1.4
2,760,015	+				-0.2
2,760,025	-				-1.1
2,760,105	+				+0.2
2,760,105	+				-0.6
2,760,223	+		DZA65_RS12880	0.18	+0.1
2,760,239	+		DZA65_RS12880	0.19	-0.2
2,760,239	+		DZA65_RS12880	0.19	+0.2
2,760,239	+		DZA65_RS12880	0.19	-0.2