Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12475

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,668,539	-				+0.3
2,668,539	-				-0.5
2,668,561	+				+0.9
2,668,562	-				-0.6
2,668,562	-				-1.6
2,668,578	+				-2.1
2,668,578	+				+0.3
2,668,578	+				+0.0
2,668,578	+				-1.8
2,668,578	+				-1.2
2,668,578	+				+0.1
2,668,578	+				-0.2
2,668,578	+				-0.4
2,668,578	+				+0.8
2,668,578	+				+0.3
2,668,578	+				-1.0
2,668,579	-				-0.7
2,668,579	-				+0.8
2,668,579	-				-2.0
2,668,579	-				-0.1
2,668,579	-				-0.1
2,668,579	-				-0.5
2,668,579	-				-0.8
2,668,579	-				-1.2
2,668,579	-				-1.8
2,668,579	-				-1.0
2,668,579	-				-1.6
2,668,579	-				-1.2
2,668,587	+				-0.7
2,668,587	+				+0.3
2,668,587	+				-0.2
2,668,588	-		DZA65_RS12470	0.10	-0.0
2,668,588	-		DZA65_RS12470	0.10	+0.0
2,668,588	-		DZA65_RS12470	0.10	-0.2
2,668,724	-		DZA65_RS12470	0.25	-0.9
2,668,724	-		DZA65_RS12470	0.25	-0.7
2,668,786	+		DZA65_RS12470	0.32	-2.4
2,668,786	+		DZA65_RS12470	0.32	-0.2
2,668,813	+		DZA65_RS12470	0.35	-1.4
2,668,813	+		DZA65_RS12470	0.35	-0.8
2,668,813	+		DZA65_RS12470	0.35	-0.1
2,668,814	-		DZA65_RS12470	0.35	+0.6
2,668,835	+		DZA65_RS12470	0.38	-0.2
2,668,835	+		DZA65_RS12470	0.38	-1.2
2,668,836	-		DZA65_RS12470	0.38	+0.2
2,668,836	-		DZA65_RS12470	0.38	-0.2
2,668,836	-		DZA65_RS12470	0.38	+0.3
2,668,836	-		DZA65_RS12470	0.38	-0.1
2,668,836	-		DZA65_RS12470	0.38	-0.4
2,668,878	+		DZA65_RS12470	0.43	+0.6
2,668,976	-		DZA65_RS12470	0.54	+0.2
2,669,013	-		DZA65_RS12470	0.58	-0.2
2,669,013	-		DZA65_RS12470	0.58	+0.7
2,669,029	+		DZA65_RS12470	0.59	-0.7
2,669,030	-		DZA65_RS12470	0.60	-1.2
2,669,074	-		DZA65_RS12470	0.65	-0.5
2,669,283	+		DZA65_RS12470	0.88	+1.1
2,669,283	+		DZA65_RS12470	0.88	-0.1
2,669,284	-		DZA65_RS12470	0.88	-0.2
2,669,308	+				-1.5
2,669,308	+				+1.9
2,669,309	-				-0.5
2,669,309	-				-1.5
2,669,309	-				-0.2
2,669,309	-				+0.6
2,669,309	-				-1.0
2,669,389	+				-0.6
2,669,409	-				-0.5
2,669,409	-				-1.8
2,669,410	+				+1.0
2,669,410	+				-0.5
2,669,411	-				-0.6
2,669,411	-				-0.8
2,669,411	-				-1.0
2,669,411	-				-0.4
2,669,411	-				-0.9
2,669,411	-				-1.1
2,669,411	-				-0.1
2,669,430	-				-0.7
2,669,430	-				+0.6
2,669,465	-				-1.0
2,669,467	+				-0.4
2,669,485	+				-0.9
2,669,485	+				+0.3
2,669,525	+				-0.5
2,669,526	-				-1.0
2,669,531	-				-0.8
2,669,531	-				+0.2
2,669,679	+		DZA65_RS12475	0.18	-0.9
2,669,727	+		DZA65_RS12475	0.23	-1.8
2,669,758	+		DZA65_RS12475	0.26	+0.1
2,669,758	+		DZA65_RS12475	0.26	-1.0
2,669,759	-		DZA65_RS12475	0.26	-3.1
2,669,759	-		DZA65_RS12475	0.26	+0.9
2,669,759	-		DZA65_RS12475	0.26	+0.9
2,669,827	-		DZA65_RS12475	0.32	-1.2
2,669,827	-		DZA65_RS12475	0.32	-0.2
2,669,842	+		DZA65_RS12475	0.34	-0.4
2,669,842	+		DZA65_RS12475	0.34	-0.9
2,669,842	+		DZA65_RS12475	0.34	-0.5
2,669,842	+		DZA65_RS12475	0.34	-0.2
2,669,842	+		DZA65_RS12475	0.34	-2.1
2,669,842	+		DZA65_RS12475	0.34	-0.2
2,669,842	+		DZA65_RS12475	0.34	-0.7
2,669,843	-		DZA65_RS12475	0.34	-2.0
2,669,843	-		DZA65_RS12475	0.34	-2.4
2,669,843	-		DZA65_RS12475	0.34	+0.3
2,669,843	-		DZA65_RS12475	0.34	-0.5
2,669,843	-		DZA65_RS12475	0.34	-0.2
2,669,843	-		DZA65_RS12475	0.34	-1.5
2,669,843	-		DZA65_RS12475	0.34	+0.0
2,669,843	-		DZA65_RS12475	0.34	-1.2
2,669,843	-		DZA65_RS12475	0.34	-1.2
2,670,121	+		DZA65_RS12475	0.61	-0.6
2,670,121	+		DZA65_RS12475	0.61	-1.0
2,670,121	+		DZA65_RS12475	0.61	+0.2
2,670,121	+		DZA65_RS12475	0.61	-0.2
2,670,121	+		DZA65_RS12475	0.61	-1.0
2,670,122	-		DZA65_RS12475	0.61	+1.0
2,670,122	-		DZA65_RS12475	0.61	-0.9
2,670,122	-		DZA65_RS12475	0.61	-1.2
2,670,127	+		DZA65_RS12475	0.62	-0.7
2,670,128	-		DZA65_RS12475	0.62	-1.2
2,670,128	-		DZA65_RS12475	0.62	-1.2
2,670,128	-		DZA65_RS12475	0.62	-2.6
2,670,144	+		DZA65_RS12475	0.63	-1.8
2,670,145	-		DZA65_RS12475	0.63	+0.8
2,670,163	+		DZA65_RS12475	0.65	-1.1
2,670,164	-		DZA65_RS12475	0.65	-1.1
2,670,196	+		DZA65_RS12475	0.68	-0.0
2,670,197	-		DZA65_RS12475	0.68	+0.9
2,670,254	+		DZA65_RS12475	0.74	+0.6
2,670,262	+		DZA65_RS12475	0.75	-0.3
2,670,262	+		DZA65_RS12475	0.75	-0.2
2,670,263	-		DZA65_RS12475	0.75	+0.7
2,670,263	-		DZA65_RS12475	0.75	-0.1
2,670,263	-		DZA65_RS12475	0.75	+0.3
2,670,433	-				-0.9
2,670,520	+				-1.1
2,670,520	+				-0.7
2,670,521	-				+0.2
2,670,521	-				+0.3
2,670,521	-				-1.0
2,670,599	+				-1.0
2,670,599	+				-0.6
2,670,599	+				-2.1
2,670,599	+				+1.0
2,670,599	+				-1.5
2,670,600	-				+1.9
2,670,600	-				-0.1
2,670,600	-				+0.1
2,670,600	-				-0.3
2,670,619	+				-0.8
2,670,619	+				-1.0
2,670,643	+				+0.9
2,670,643	+				-1.5
2,670,643	+				+1.1
2,670,660	+				-1.9
2,670,660	+				-1.1
2,670,660	+				+1.8
2,670,660	+				-1.8
2,670,660	+				+0.9
2,670,660	+				+0.2
2,670,660	+				+0.9
2,670,660	+				-0.2
2,670,660	+				-1.5
2,670,660	+				-1.2
2,670,661	-				-1.0
2,670,661	-				+0.1
2,670,661	-				-0.1
2,670,661	-				+0.3
2,670,769	+		DZA65_RS12480	0.12	-1.5
2,670,769	+		DZA65_RS12480	0.12	-2.2
2,670,770	-		DZA65_RS12480	0.12	-0.2
2,670,770	-		DZA65_RS12480	0.12	+1.7
2,670,770	-		DZA65_RS12480	0.12	+0.7
2,670,770	-		DZA65_RS12480	0.12	+0.5
2,670,806	-		DZA65_RS12480	0.14	-1.3
2,671,119	+		DZA65_RS12480	0.37	+0.9
2,671,119	+		DZA65_RS12480	0.37	+0.3
2,671,119	+		DZA65_RS12480	0.37	-0.2
2,671,119	+		DZA65_RS12480	0.37	-1.7
2,671,120	-		DZA65_RS12480	0.37	-0.1
2,671,129	+		DZA65_RS12480	0.38	-1.2
2,671,209	+		DZA65_RS12480	0.43	+0.3
2,671,209	+		DZA65_RS12480	0.43	+0.1
2,671,209	+		DZA65_RS12480	0.43	+0.8
2,671,209	+		DZA65_RS12480	0.43	-0.8
2,671,209	+		DZA65_RS12480	0.43	-0.2
2,671,209	+		DZA65_RS12480	0.43	-0.2
2,671,209	+		DZA65_RS12480	0.43	+0.3
2,671,209	+		DZA65_RS12480	0.43	+0.3
2,671,209	+		DZA65_RS12480	0.43	-0.5
2,671,209	+		DZA65_RS12480	0.43	-1.2
2,671,209	+		DZA65_RS12480	0.43	-0.2
2,671,209	+		DZA65_RS12480	0.43	+0.6
2,671,209	+		DZA65_RS12480	0.43	-1.2
2,671,209	+		DZA65_RS12480	0.43	-0.1
2,671,209	+		DZA65_RS12480	0.43	-1.7
2,671,209	+		DZA65_RS12480	0.43	-2.0
2,671,210	-		DZA65_RS12480	0.43	-0.7
2,671,210	-		DZA65_RS12480	0.43	-0.9
2,671,210	-		DZA65_RS12480	0.43	+0.3
2,671,210	-		DZA65_RS12480	0.43	+0.1
2,671,210	-		DZA65_RS12480	0.43	-0.6
2,671,210	-		DZA65_RS12480	0.43	-0.2
2,671,210	-		DZA65_RS12480	0.43	+1.3
2,671,210	-		DZA65_RS12480	0.43	-0.1
2,671,210	-		DZA65_RS12480	0.43	-1.5
2,671,210	-		DZA65_RS12480	0.43	+0.1
2,671,210	-		DZA65_RS12480	0.43	-0.2
2,671,210	-		DZA65_RS12480	0.43	-2.0
2,671,214	+		DZA65_RS12480	0.44	+0.5
2,671,214	+				+1.3
2,671,214	+		DZA65_RS12480	0.44	-0.2
2,671,214	+		DZA65_RS12480	0.44	+1.9
2,671,214	+		DZA65_RS12480	0.44	-0.7
2,671,214	+		DZA65_RS12480	0.44	+0.3
2,671,215	-		DZA65_RS12480	0.44	-0.2
2,671,215	-		DZA65_RS12480	0.44	-1.0
2,671,265	+		DZA65_RS12480	0.47	-0.1
2,671,265	+		DZA65_RS12480	0.47	+0.1
2,671,266	-		DZA65_RS12480	0.47	-0.8
2,671,325	-		DZA65_RS12480	0.52	+2.9
2,671,445	+		DZA65_RS12480	0.60	-0.7
2,671,446	-		DZA65_RS12480	0.60	-0.1